RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 IGHV4-4A0A075B6R2 117 aa6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 LOXL1Q08397 574 aaPredicted RBP6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 FAM110AQ9BQ89 295 aa6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 EDA2RQ9HAV5 297 aa6.36□□□□□ -1.39
PTPDC1-204ENST00000620992 EGR2P11161 476 aaPredicted RBP6.35□□□□□ -1.39
PTPDC1-204ENST00000620992 DNAJC9-AS1A6NH13 148 aa6.35□□□□□ -1.39
PTPDC1-204ENST00000620992 PRSS29PA6NIE9 313 aa6.35□□□□□ -1.39
PTPDC1-204ENST00000620992 DEFB125Q8N687 156 aa6.35□□□□□ -1.39
PTPDC1-204ENST00000620992 RNASE8Q8TDE3 154 aaKnown RBP6.35□□□□□ -1.39
PTPDC1-204ENST00000620992 TRAV8-3A0A0A6YYJ7 113 aa6.35□□□□□ -1.39
PTPDC1-204ENST00000620992 NPYP01303 97 aa6.35□□□□□ -1.39
PTPDC1-204ENST00000620992 MRPL51Q4U2R6 128 aaKnown RBP6.35□□□□□ -1.39
PTPDC1-204ENST00000620992 BVES-AS1Q5T3Y7 98 aa6.35□□□□□ -1.39
PTPDC1-204ENST00000620992 SRSF8Q9BRL6 282 aaKnown RBP6.35□□□□□ -1.39
PTPDC1-204ENST00000620992 ZNF747Q9BV97 191 aa6.35□□□□□ -1.39
PTPDC1-204ENST00000620992 ERG28Q9UKR5 140 aa6.35□□□□□ -1.39
PTPDC1-204ENST00000620992 PMVKQ15126 192 aa6.34□□□□□ -1.39
PTPDC1-204ENST00000620992 ZNF479Q96JC4 524 aa6.34□□□□□ -1.39
PTPDC1-204ENST00000620992 TMEM243Q9BU79 118 aa6.34□□□□□ -1.39
PTPDC1-204ENST00000620992 TTC32Q5I0X7 151 aa6.34□□□□□ -1.39
PTPDC1-204ENST00000620992 C5orf56Q8N8D9 126 aa6.34□□□□□ -1.39
PTPDC1-204ENST00000620992 LINC00482Q8N8I6 264 aa6.34□□□□□ -1.39
PTPDC1-204ENST00000620992 DLX4Q92988 240 aaPredicted RBP6.34□□□□□ -1.39
PTPDC1-204ENST00000620992 SIGLEC8Q9NYZ4 499 aa6.34□□□□□ -1.39
PTPDC1-204ENST00000620992 CRLF1O75462 422 aa6.34□□□□□ -1.39
PTPDC1-204ENST00000620992 CFHR4Q92496 578 aa6.34□□□□□ -1.39
PTPDC1-204ENST00000620992 RASL10AQ92737 203 aa6.34□□□□□ -1.39
PTPDC1-204ENST00000620992 SCRT2Q9NQ03 307 aa6.34□□□□□ -1.39
PTPDC1-204ENST00000620992 IGLL5B9A064 214 aa6.34□□□□□ -1.4
PTPDC1-204ENST00000620992 LY6LH3BQJ8 138 aa6.34□□□□□ -1.4
PTPDC1-204ENST00000620992 GYPEP15421 78 aa6.34□□□□□ -1.4
PTPDC1-204ENST00000620992 TRPT1Q86TN4 253 aaKnown RBP6.34□□□□□ -1.4
PTPDC1-204ENST00000620992 FANCD2OSQ96PS1 177 aa6.34□□□□□ -1.4
PTPDC1-204ENST00000620992 SVEP1Q4LDE5 3571 aa6.33□□□□□ -1.4
PTPDC1-204ENST00000620992 FAM104BQ5XKR9 115 aa6.33□□□□□ -1.4
PTPDC1-204ENST00000620992 LINC01545Q5VT33 79 aa6.33□□□□□ -1.4
PTPDC1-204ENST00000620992 BSNQ9UPA5 3926 aa6.33□□□□□ -1.4
PTPDC1-204ENST00000620992 RHODO00212 210 aa6.33□□□□□ -1.4
PTPDC1-204ENST00000620992 TAX1BP3O14907 124 aa6.33□□□□□ -1.4
PTPDC1-204ENST00000620992 DCHS2Q6V1P9 2916 aa6.33□□□□□ -1.4
PTPDC1-204ENST00000620992 ASH1LQ9NR48 2969 aaKnown RBP6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 WI2-2373I1.2A0A1W2PRP0 233 aa6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 RPL39LQ96EH5 51 aaKnown RBP6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 IGLV11-55A0A075B6I3 123 aa6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 A8MWV9 139 aa6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 GAGE2EQ4V326 116 aa6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 ANKRD39Q53RE8 183 aa6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 MRPL35Q9NZE8 188 aaKnown RBP6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 GAGE2DQ9UEU5 116 aa6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 CLPSL1A2RUU4 121 aa6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 SPINK8P0C7L1 97 aa6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 C10orf126Q8N4M7 172 aa6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 ZNF48Q96MX3 618 aaPredicted RBP6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 K7EMI3 77 aa6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 COX8AP10176 69 aa6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 TMEM190Q8WZ59 177 aa6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 MRPL53Q96EL3 112 aaKnown RBP6.32□□□□□ -1.4
PTPDC1-204ENST00000620992 TRAV25A0A0B4J276 109 aa6.31□□□□□ -1.4
PTPDC1-204ENST00000620992 MRPS12O15235 138 aaKnown RBP6.31□□□□□ -1.4
PTPDC1-204ENST00000620992 ZNF80P51504 273 aaPredicted RBP6.31□□□□□ -1.4
PTPDC1-204ENST00000620992 UBE2BP63146 152 aa6.31□□□□□ -1.4
PTPDC1-204ENST00000620992 SMAD5-AS1Q9Y6J3 95 aa6.31□□□□□ -1.4
PTPDC1-204ENST00000620992 TRBV6-1A0A0K0K1D8 114 aa6.31□□□□□ -1.4
PTPDC1-204ENST00000620992 BUB3O43684 328 aa6.31□□□□□ -1.4
PTPDC1-204ENST00000620992 C16orf54Q6UWD8 224 aa6.31□□□□□ -1.4
PTPDC1-204ENST00000620992 NPBQ8NG41 125 aa6.31□□□□□ -1.4
PTPDC1-204ENST00000620992 TMEM238C9JI98 176 aa6.31□□□□□ -1.4
PTPDC1-204ENST00000620992 I3L3M4 83 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 RS1O15537 224 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 C9orf66Q5T8R8 295 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 AMTNQ6UX39 209 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 HIST1H4AP62805 103 aaKnown RBP6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 SEC11AP67812 179 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 Q8N1Y9 231 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 NKAPP1Q8N9T2 125 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 DEFB105AQ8NG35 78 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 SPAG8Q99932 426 aaPredicted RBP6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 TMEM126AQ9H061 195 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 MYMXA0A1B0GTQ4 84 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 LY6G6DO95868 133 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 SIRPDQ9H106 197 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 F8W735 103 aaPredicted RBP6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 CD5LO43866 347 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 PRM2P04554 102 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 Q6ZS46 218 aa6.3□□□□□ -1.4
PTPDC1-204ENST00000620992 A0A096LNJ9 63 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 SPART-AS1P0CW21 52 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 SAMD5Q5TGI4 173 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 FOXI2Q6ZQN5 318 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 PLEKHB2Q96CS7 222 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 WFDC10AQ9H1F0 79 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 DKK2Q9UBU2 259 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 KLK12Q9UKR0 248 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 ZNF493Q6ZR52 646 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 C1orf43Q9BWL3 253 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 MDFICQ9P1T7 246 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 NDUFA12Q9UI09 145 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 GAS8-AS1O95177 125 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 IGHV4-31P0DP07 118 aa6.29□□□□□ -1.4
PTPDC1-204ENST00000620992 OCIAD2Q56VL3 154 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms