RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 ZNF876PQ49A33 203 aa11.32□□□□□ -0.6
CD40-207ENST00000620709 PIK3CD-AS1Q5SR53 167 aa11.32□□□□□ -0.6
CD40-207ENST00000620709 C14orf178Q8N769 122 aaPredicted RBP11.32□□□□□ -0.6
CD40-207ENST00000620709 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
CD40-207ENST00000620709 C16orf74Q96GX8 76 aa11.32□□□□□ -0.6
CD40-207ENST00000620709 PRELID3AQ96N28 172 aa11.32□□□□□ -0.6
CD40-207ENST00000620709 F5H768 121 aa11.31□□□□□ -0.6
CD40-207ENST00000620709 RTL8CO15255 209 aa11.31□□□□□ -0.6
CD40-207ENST00000620709 LGALS9BQ3B8N2 356 aa11.31□□□□□ -0.6
CD40-207ENST00000620709 MRAP2Q96G30 205 aa11.31□□□□□ -0.6
CD40-207ENST00000620709 IQCJQ1A5X6 159 aa11.3□□□□□ -0.6
CD40-207ENST00000620709 HIST3H2BBQ8N257 126 aa11.3□□□□□ -0.6
CD40-207ENST00000620709 LAMTOR2Q9Y2Q5 125 aa11.3□□□□□ -0.6
CD40-207ENST00000620709 SERF1AO75920 110 aa11.3□□□□□ -0.6
CD40-207ENST00000620709 NCR2O95944 276 aa11.3□□□□□ -0.6
CD40-207ENST00000620709 NUDT3O95989 172 aa11.3□□□□□ -0.6
CD40-207ENST00000620709 MGPP08493 103 aa11.3□□□□□ -0.6
CD40-207ENST00000620709 C15orf53Q8NAA6 179 aa11.3□□□□□ -0.6
CD40-207ENST00000620709 KIF25-AS1Q9Y6Z4 181 aa11.3□□□□□ -0.6
CD40-207ENST00000620709 PKD1P98161 4303 aa11.29□□□□□ -0.6
CD40-207ENST00000620709 KIAA1109Q2LD37 5005 aa11.29□□□□□ -0.6
CD40-207ENST00000620709 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
CD40-207ENST00000620709 S100A2P29034 98 aa11.29□□□□□ -0.6
CD40-207ENST00000620709 KRTAP17-1Q9BYP8 105 aa11.29□□□□□ -0.6
CD40-207ENST00000620709 JPT2Q9H910 190 aa11.29□□□□□ -0.6
CD40-207ENST00000620709 DYNC1H1Q14204 4646 aaKnown RBP11.28□□□□□ -0.6
CD40-207ENST00000620709 A0A087WWL8 130 aa11.28□□□□□ -0.6
CD40-207ENST00000620709 A0A1B0GVY2 172 aa11.28□□□□□ -0.6
CD40-207ENST00000620709 PLAC8L1A1L4L8 177 aa11.28□□□□□ -0.6
CD40-207ENST00000620709 A8MWV9 139 aa11.28□□□□□ -0.6
CD40-207ENST00000620709 ATP5G1P05496 136 aa11.28□□□□□ -0.6
CD40-207ENST00000620709 ESDP10768 282 aa11.28□□□□□ -0.6
CD40-207ENST00000620709 LINC00310P59036 64 aa11.28□□□□□ -0.6
CD40-207ENST00000620709 PDZD11Q5EBL8 140 aa11.28□□□□□ -0.6
CD40-207ENST00000620709 NOP10Q9NPE3 64 aaKnown RBP11.28□□□□□ -0.6
CD40-207ENST00000620709 NACAE9PAV3 2078 aa11.27□□□□□ -0.61
CD40-207ENST00000620709 NPYP01303 97 aa11.27□□□□□ -0.61
CD40-207ENST00000620709 FAM74A4Q5TZK3 123 aa11.27□□□□□ -0.61
CD40-207ENST00000620709 MRPL16Q9NX20 251 aaKnown RBP11.27□□□□□ -0.61
CD40-207ENST00000620709 TRAV26-2A0A0B4J265 109 aa11.26□□□□□ -0.61
CD40-207ENST00000620709 CRYGDP07320 174 aa11.26□□□□□ -0.61
CD40-207ENST00000620709 LINC00315P59091 139 aa11.26□□□□□ -0.61
CD40-207ENST00000620709 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
CD40-207ENST00000620709 RASL10AQ92737 203 aa11.26□□□□□ -0.61
CD40-207ENST00000620709 NUPR1O60356 82 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 C1orf134Q5TEV5 83 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 RNASEKQ6P5S7 137 aaKnown RBP11.25□□□□□ -0.61
CD40-207ENST00000620709 Q6ZR54 194 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 SAMD10Q9BYL1 202 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 MAP1LC3AQ9H492 121 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 DNAH11Q96DT5 4516 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 TRGV1A0A0A0MS02 117 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 F5H697 171 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 RHODO00212 210 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 GAS8-AS1O95177 125 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 PPP1R17O96001 155 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 GATA1P15976 413 aaPredicted RBP11.25□□□□□ -0.61
CD40-207ENST00000620709 ZNF56Q15929 161 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 NIT1Q86X76 327 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 NRACQ8N912 160 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 TMEM18Q96B42 140 aa11.25□□□□□ -0.61
CD40-207ENST00000620709 CHCHD1Q96BP2 118 aaKnown RBP11.25□□□□□ -0.61
CD40-207ENST00000620709 IFITM10A6NMD0 228 aa11.24□□□□□ -0.61
CD40-207ENST00000620709 SUMO4Q6EEV6 95 aa11.24□□□□□ -0.61
CD40-207ENST00000620709 FA2HQ7L5A8 372 aa11.24□□□□□ -0.61
CD40-207ENST00000620709 PRSS3P2Q8NHM4 247 aa11.24□□□□□ -0.61
CD40-207ENST00000620709 LOC389332A0A1B0GUA5 103 aa11.23□□□□□ -0.61
CD40-207ENST00000620709 HSBP1O75506 76 aa11.23□□□□□ -0.61
CD40-207ENST00000620709 LINC00614P0C842 121 aa11.23□□□□□ -0.61
CD40-207ENST00000620709 FABP4P15090 132 aa11.23□□□□□ -0.61
CD40-207ENST00000620709 CFAP126Q5VTH2 177 aa11.23□□□□□ -0.61
CD40-207ENST00000620709 URB1-AS1Q96HZ7 61 aa11.23□□□□□ -0.61
CD40-207ENST00000620709 HIST1H2BLQ99880 126 aa11.23□□□□□ -0.61
CD40-207ENST00000620709 GAGE12BA1L429 117 aa11.22□□□□□ -0.61
CD40-207ENST00000620709 RS1O15537 224 aa11.22□□□□□ -0.61
CD40-207ENST00000620709 GAGE7O76087 117 aa11.22□□□□□ -0.61
CD40-207ENST00000620709 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
CD40-207ENST00000620709 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
CD40-207ENST00000620709 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
CD40-207ENST00000620709 AKR1D1P51857 326 aa11.22□□□□□ -0.61
CD40-207ENST00000620709 CCL18P55774 89 aa11.22□□□□□ -0.61
CD40-207ENST00000620709 PRSS47A8MTI9 375 aa11.21□□□□□ -0.61
CD40-207ENST00000620709 IFI27P40305 119 aaPredicted RBP11.21□□□□□ -0.61
CD40-207ENST00000620709 AMTP48728 403 aa11.21□□□□□ -0.61
CD40-207ENST00000620709 UFSP1Q6NVU6 142 aa11.21□□□□□ -0.61
CD40-207ENST00000620709 Q6ZTI0 123 aa11.21□□□□□ -0.61
CD40-207ENST00000620709 PACRGQ96M98 296 aaPredicted RBP11.21□□□□□ -0.61
CD40-207ENST00000620709 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
CD40-207ENST00000620709 NXT2Q9NPJ8 142 aaKnown RBP11.21□□□□□ -0.61
CD40-207ENST00000620709 AP5S1Q9NUS5 200 aa11.21□□□□□ -0.61
CD40-207ENST00000620709 A0A0J9YY99 117 aa11.2□□□□□ -0.62
CD40-207ENST00000620709 H7C1H1 209 aa11.2□□□□□ -0.62
CD40-207ENST00000620709 PMCHP20382 165 aa11.2□□□□□ -0.62
CD40-207ENST00000620709 ZFP2Q6ZN57 461 aa11.2□□□□□ -0.62
CD40-207ENST00000620709 RPL39LQ96EH5 51 aaKnown RBP11.2□□□□□ -0.62
CD40-207ENST00000620709 TRAV26-1A0A087WT03 109 aa11.19□□□□□ -0.62
CD40-207ENST00000620709 TRAV4A0A0B4J268 109 aa11.19□□□□□ -0.62
CD40-207ENST00000620709 SUMO2P61956 95 aaKnown RBP11.19□□□□□ -0.62
CD40-207ENST00000620709 OR4C5Q8NGB2 326 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms