RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 AZU1P20160 251 aa14.68□□□□□ -0.06
MMP28-207ENST00000619655 M0R2P5 195 aa14.67□□□□□ -0.06
MMP28-207ENST00000619655 C1orf158Q8N1D5 194 aa14.67□□□□□ -0.06
MMP28-207ENST00000619655 SDHAF1A6NFY7 115 aa14.67□□□□□ -0.06
MMP28-207ENST00000619655 RBX1P62877 108 aa14.67□□□□□ -0.06
MMP28-207ENST00000619655 BEAN1Q3B7T3 259 aa14.67□□□□□ -0.06
MMP28-207ENST00000619655 C11orf72Q8NBR9 251 aa14.67□□□□□ -0.06
MMP28-207ENST00000619655 RNASE8Q8TDE3 154 aaKnown RBP14.67□□□□□ -0.06
MMP28-207ENST00000619655 MRPL16Q9NX20 251 aaKnown RBP14.67□□□□□ -0.06
MMP28-207ENST00000619655 M0QY20 66 aa14.66□□□□□ -0.06
MMP28-207ENST00000619655 SPATA3Q8NHX4 192 aa14.66□□□□□ -0.06
MMP28-207ENST00000619655 CMC4P56277 68 aaPredicted RBP14.66□□□□□ -0.06
MMP28-207ENST00000619655 ATP5LO75964 103 aa14.65□□□□□ -0.06
MMP28-207ENST00000619655 ANKRD39Q53RE8 183 aa14.65□□□□□ -0.06
MMP28-207ENST00000619655 MORN3Q6PF18 240 aaPredicted RBP14.65□□□□□ -0.06
MMP28-207ENST00000619655 C19orf73Q9NVV2 129 aa14.65□□□□□ -0.06
MMP28-207ENST00000619655 TEP1Q99973 2627 aaKnown RBP14.65□□□□□ -0.06
MMP28-207ENST00000619655 POLR2KP53803 58 aaKnown RBP14.64□□□□□ -0.07
MMP28-207ENST00000619655 C2orf66Q6UXQ4 117 aa14.64□□□□□ -0.07
MMP28-207ENST00000619655 Q6ZVH6 145 aa14.64□□□□□ -0.07
MMP28-207ENST00000619655 SCGB3A1Q96QR1 104 aa14.64□□□□□ -0.07
MMP28-207ENST00000619655 KIR2DL4Q99706 377 aa14.64□□□□□ -0.07
MMP28-207ENST00000619655 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.63□□□□□ -0.07
MMP28-207ENST00000619655 ODF1Q14990 250 aa14.63□□□□□ -0.07
MMP28-207ENST00000619655 SLC25A34Q6PIV7 304 aa14.63□□□□□ -0.07
MMP28-207ENST00000619655 LINC00467Q9BRT7 94 aa14.63□□□□□ -0.07
MMP28-207ENST00000619655 K7EMI3 77 aa14.63□□□□□ -0.07
MMP28-207ENST00000619655 VCYO14598 125 aa14.63□□□□□ -0.07
MMP28-207ENST00000619655 P0DMU3 169 aa14.63□□□□□ -0.07
MMP28-207ENST00000619655 FAM231AP0DMU4 169 aa14.63□□□□□ -0.07
MMP28-207ENST00000619655 FAM231CP0DMU5 169 aa14.63□□□□□ -0.07
MMP28-207ENST00000619655 TOMM6Q96B49 74 aa14.63□□□□□ -0.07
MMP28-207ENST00000619655 A8MWV9 139 aa14.62□□□□□ -0.07
MMP28-207ENST00000619655 NACAE9PAV3 2078 aa14.61□□□□□ -0.07
MMP28-207ENST00000619655 TRRAPQ9Y4A5 3859 aa14.61□□□□□ -0.07
MMP28-207ENST00000619655 GIG44P09565 113 aaPredicted RBP14.61□□□□□ -0.07
MMP28-207ENST00000619655 CFAP126Q5VTH2 177 aa14.61□□□□□ -0.07
MMP28-207ENST00000619655 ZFP2Q6ZN57 461 aa14.61□□□□□ -0.07
MMP28-207ENST00000619655 OR4C5Q8NGB2 326 aa14.61□□□□□ -0.07
MMP28-207ENST00000619655 FAM110AQ9BQ89 295 aa14.61□□□□□ -0.07
MMP28-207ENST00000619655 TRBV6-5A0A0K0K1A5 114 aa14.6□□□□□ -0.07
MMP28-207ENST00000619655 SPXQ9BT56 116 aa14.6□□□□□ -0.07
MMP28-207ENST00000619655 TRBV27A0A0K0K1C4 114 aa14.59□□□□□ -0.07
MMP28-207ENST00000619655 RPL32P62910 135 aaKnown RBP14.59□□□□□ -0.07
MMP28-207ENST00000619655 MPV17L2Q567V2 206 aa14.59□□□□□ -0.07
MMP28-207ENST00000619655 TP53TG1Q9Y2A0 90 aa14.59□□□□□ -0.07
MMP28-207ENST00000619655 TRGV1A0A0A0MS02 117 aa14.59□□□□□ -0.07
MMP28-207ENST00000619655 RPL39P62891 51 aaKnown RBP14.59□□□□□ -0.07
MMP28-207ENST00000619655 MRPL35Q9NZE8 188 aaKnown RBP14.59□□□□□ -0.07
MMP28-207ENST00000619655 Q6ZSN1 163 aa14.58□□□□□ -0.08
MMP28-207ENST00000619655 H7C1H1 209 aa14.58□□□□□ -0.08
MMP28-207ENST00000619655 IGKCP01834 107 aa14.58□□□□□ -0.08
MMP28-207ENST00000619655 Q9UF83 564 aa14.58□□□□□ -0.08
MMP28-207ENST00000619655 CYSLTR1Q9Y271 337 aa14.58□□□□□ -0.08
MMP28-207ENST00000619655 VAMP3Q15836 100 aa14.57□□□□□ -0.08
MMP28-207ENST00000619655 UFSP1Q6NVU6 142 aa14.57□□□□□ -0.08
MMP28-207ENST00000619655 CITED1Q99966 193 aa14.57□□□□□ -0.08
MMP28-207ENST00000619655 GTSCR1Q86UQ5 136 aa14.57□□□□□ -0.08
MMP28-207ENST00000619655 COTL1Q14019 142 aa14.56□□□□□ -0.08
MMP28-207ENST00000619655 TMEM263Q8WUH6 116 aaKnown RBP14.56□□□□□ -0.08
MMP28-207ENST00000619655 A0A087WX48 190 aa14.55□□□□□ -0.08
MMP28-207ENST00000619655 DPM2O94777 84 aa14.55□□□□□ -0.08
MMP28-207ENST00000619655 NMUP48645 174 aa14.55□□□□□ -0.08
MMP28-207ENST00000619655 PIK3CD-AS1Q5SR53 167 aa14.55□□□□□ -0.08
MMP28-207ENST00000619655 COX8AP10176 69 aa14.55□□□□□ -0.08
MMP28-207ENST00000619655 C9orf66Q5T8R8 295 aa14.55□□□□□ -0.08
MMP28-207ENST00000619655 ERASQ7Z444 233 aa14.55□□□□□ -0.08
MMP28-207ENST00000619655 I3L3M4 83 aa14.54□□□□□ -0.08
MMP28-207ENST00000619655 BVES-AS1Q5T3Y7 98 aa14.54□□□□□ -0.08
MMP28-207ENST00000619655 Q6ZTI0 123 aa14.54□□□□□ -0.08
MMP28-207ENST00000619655 BAALCQ8WXS3 180 aa14.54□□□□□ -0.08
MMP28-207ENST00000619655 PTH2Q96A98 100 aa14.54□□□□□ -0.08
MMP28-207ENST00000619655 C1QTNF4Q9BXJ3 329 aa14.54□□□□□ -0.08
MMP28-207ENST00000619655 ZMAT4Q9H898 229 aa14.54□□□□□ -0.08
MMP28-207ENST00000619655 NOP10Q9NPE3 64 aaKnown RBP14.54□□□□□ -0.08
MMP28-207ENST00000619655 TNFRSF18Q9Y5U5 241 aa14.54□□□□□ -0.08
MMP28-207ENST00000619655 C12orf54Q6X4T0 127 aa14.54□□□□□ -0.08
MMP28-207ENST00000619655 TAX1BP3O14907 124 aa14.53□□□□□ -0.08
MMP28-207ENST00000619655 IGHV3-53P01767 116 aa14.53□□□□□ -0.08
MMP28-207ENST00000619655 HHLA3Q9XRX5 114 aa14.53□□□□□ -0.08
MMP28-207ENST00000619655 RHODO00212 210 aa14.53□□□□□ -0.08
MMP28-207ENST00000619655 TSHBP01222 138 aa14.53□□□□□ -0.08
MMP28-207ENST00000619655 NEXN-AS1Q8NBZ9 246 aa14.53□□□□□ -0.08
MMP28-207ENST00000619655 IL17DQ8TAD2 202 aa14.53□□□□□ -0.08
MMP28-207ENST00000619655 RS1O15537 224 aa14.52□□□□□ -0.08
MMP28-207ENST00000619655 INSL3P51460 131 aa14.52□□□□□ -0.08
MMP28-207ENST00000619655 ZC2HC1BQ5TFG8 222 aa14.52□□□□□ -0.08
MMP28-207ENST00000619655 CSNK1G2-AS1Q8NCQ2 148 aa14.52□□□□□ -0.08
MMP28-207ENST00000619655 CHTOPQ9Y3Y2 248 aaKnown RBP14.52□□□□□ -0.08
MMP28-207ENST00000619655 ZNF479Q96JC4 524 aa14.51□□□□□ -0.09
MMP28-207ENST00000619655 TRAV12-1A0A0B4J245 112 aa14.5□□□□□ -0.09
MMP28-207ENST00000619655 F8VRH5 84 aa14.5□□□□□ -0.09
MMP28-207ENST00000619655 RIPPLY3P57055 190 aa14.5□□□□□ -0.09
MMP28-207ENST00000619655 PCP2Q8IVA1 136 aa14.5□□□□□ -0.09
MMP28-207ENST00000619655 C16orf74Q96GX8 76 aa14.5□□□□□ -0.09
MMP28-207ENST00000619655 EDA2RQ9HAV5 297 aa14.5□□□□□ -0.09
MMP28-207ENST00000619655 PRSS29PA6NIE9 313 aa14.49□□□□□ -0.09
MMP28-207ENST00000619655 IGIPA6NJ69 53 aa14.49□□□□□ -0.09
MMP28-207ENST00000619655 RRN3P1Q2M238 152 aa14.49□□□□□ -0.09
MMP28-207ENST00000619655 C2orf91Q6ZV80 131 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms