RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 ZNF561-AS1K7EIQ3 104 aa10.36□□□□□ -0.75
CACNA1C-231ENST00000616390 CR1P17927 2039 aa10.36□□□□□ -0.75
CACNA1C-231ENST00000616390 K7EMT4 169 aa10.36□□□□□ -0.75
CACNA1C-231ENST00000616390 FXYD2P54710 66 aa10.36□□□□□ -0.75
CACNA1C-231ENST00000616390 KHDC1LQ5JSQ8 128 aa10.36□□□□□ -0.75
CACNA1C-231ENST00000616390 CHAC1Q9BUX1 264 aa10.36□□□□□ -0.75
CACNA1C-231ENST00000616390 CDIP1Q9H305 208 aa10.36□□□□□ -0.75
CACNA1C-231ENST00000616390 SPCS1Q9Y6A9 102 aa10.36□□□□□ -0.75
CACNA1C-231ENST00000616390 APCP25054 2843 aa10.36□□□□□ -0.75
CACNA1C-231ENST00000616390 UBR5O95071 2799 aaPredicted RBP10.35□□□□□ -0.75
CACNA1C-231ENST00000616390 LOC107984640A0A0U1RRK4 108 aa10.35□□□□□ -0.75
CACNA1C-231ENST00000616390 KLLNB2CW77 178 aa10.35□□□□□ -0.75
CACNA1C-231ENST00000616390 K7ERJ3 54 aa10.35□□□□□ -0.75
CACNA1C-231ENST00000616390 SNRPD3P62318 126 aaKnown RBP10.35□□□□□ -0.75
CACNA1C-231ENST00000616390 ORMDL2Q53FV1 153 aa10.35□□□□□ -0.75
CACNA1C-231ENST00000616390 Q6ZUT4 128 aa10.35□□□□□ -0.75
CACNA1C-231ENST00000616390 TINCRA0A1B0GVN0 87 aa10.34□□□□□ -0.75
CACNA1C-231ENST00000616390 H3BRM9 83 aa10.34□□□□□ -0.75
CACNA1C-231ENST00000616390 HOXD3P31249 432 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-231ENST00000616390 ZNF256Q9Y2P7 627 aaPredicted RBP10.34□□□□□ -0.75
CACNA1C-231ENST00000616390 A0A096LNT2 108 aa10.34□□□□□ -0.75
CACNA1C-231ENST00000616390 H7C1H1 209 aa10.34□□□□□ -0.75
CACNA1C-231ENST00000616390 DUSP14O95147 198 aaKnown RBP10.34□□□□□ -0.75
CACNA1C-231ENST00000616390 SLURP1P55000 103 aa10.34□□□□□ -0.75
CACNA1C-231ENST00000616390 SUMO4Q6EEV6 95 aa10.34□□□□□ -0.75
CACNA1C-231ENST00000616390 TEX29Q8N6K0 151 aa10.34□□□□□ -0.75
CACNA1C-231ENST00000616390 BAALCQ8WXS3 180 aa10.34□□□□□ -0.75
CACNA1C-231ENST00000616390 C20orf78Q9BR46 151 aa10.34□□□□□ -0.75
CACNA1C-231ENST00000616390 PRM2P04554 102 aa10.33□□□□□ -0.76
CACNA1C-231ENST00000616390 RPL39P62891 51 aaKnown RBP10.33□□□□□ -0.76
CACNA1C-231ENST00000616390 APRG1Q8IVJ8 170 aa10.33□□□□□ -0.76
CACNA1C-231ENST00000616390 Q8N1Y9 231 aa10.33□□□□□ -0.76
CACNA1C-231ENST00000616390 TOMM6Q96B49 74 aa10.33□□□□□ -0.76
CACNA1C-231ENST00000616390 TMEM101Q96IK0 257 aa10.33□□□□□ -0.76
CACNA1C-231ENST00000616390 LINC00694P0DN24 101 aa10.33□□□□□ -0.76
CACNA1C-231ENST00000616390 ZNF56Q15929 161 aa10.33□□□□□ -0.76
CACNA1C-231ENST00000616390 NHP2Q9NX24 153 aaKnown RBP10.33□□□□□ -0.76
CACNA1C-231ENST00000616390 A0A0J9YX75 114 aa10.32□□□□□ -0.76
CACNA1C-231ENST00000616390 F8VRH5 84 aa10.32□□□□□ -0.76
CACNA1C-231ENST00000616390 MEIG1Q5JSS6 88 aa10.32□□□□□ -0.76
CACNA1C-231ENST00000616390 ITPR3Q14573 2671 aa10.32□□□□□ -0.76
CACNA1C-231ENST00000616390 J3KT08 172 aa10.32□□□□□ -0.76
CACNA1C-231ENST00000616390 IGHV4-31P0DP07 118 aa10.32□□□□□ -0.76
CACNA1C-231ENST00000616390 XGP55808 180 aa10.32□□□□□ -0.76
CACNA1C-231ENST00000616390 IGHV3-73A0A0B4J1V6 119 aa10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 PRSS29PA6NIE9 313 aa10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 KNCNA6PVL3 124 aa10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 PF4P02776 101 aa10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 PLNP26678 52 aa10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 LINC00315P59091 139 aa10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 ZNF702PQ9H963 129 aa10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 TP53TG1Q9Y2A0 90 aa10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 LGALS1P09382 135 aaKnown RBP10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 SMIM13P0DJ93 91 aa10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 NDUFV3P56181 108 aaKnown RBP10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 KIF25-AS1Q9Y6Z4 181 aa10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 ACANP16112 2415 aa10.31□□□□□ -0.76
CACNA1C-231ENST00000616390 C9JAW5 83 aa10.3□□□□□ -0.76
CACNA1C-231ENST00000616390 K7EQG2 157 aa10.3□□□□□ -0.76
CACNA1C-231ENST00000616390 Q6YL49 198 aa10.3□□□□□ -0.76
CACNA1C-231ENST00000616390 NEXN-AS1Q8NBZ9 246 aa10.3□□□□□ -0.76
CACNA1C-231ENST00000616390 NIPBLQ6KC79 2804 aaeCLIP10.3□□□□□ -0.76
CACNA1C-231ENST00000616390 FLNAP21333 2647 aaKnown RBP10.3□□□□□ -0.76
CACNA1C-231ENST00000616390 MED14OSP0DP75 135 aa10.3□□□□□ -0.76
CACNA1C-231ENST00000616390 HLA-DRB4P13762 266 aa10.3□□□□□ -0.76
CACNA1C-231ENST00000616390 HIST1H4GQ99525 98 aa10.3□□□□□ -0.76
CACNA1C-231ENST00000616390 HLA-DRB4X5D2U9 266 aa10.3□□□□□ -0.76
CACNA1C-231ENST00000616390 A0A1W2PPM0 123 aa10.29□□□□□ -0.76
CACNA1C-231ENST00000616390 SDHAF1A6NFY7 115 aa10.29□□□□□ -0.76
CACNA1C-231ENST00000616390 C11orf44Q8N8P7 122 aa10.29□□□□□ -0.76
CACNA1C-231ENST00000616390 SYT8Q8NBV8 401 aa10.29□□□□□ -0.76
CACNA1C-231ENST00000616390 Q96MF0 132 aa10.29□□□□□ -0.76
CACNA1C-231ENST00000616390 IGHV3-16A0A0C4DH30 117 aa10.29□□□□□ -0.76
CACNA1C-231ENST00000616390 IGHV1OR15-1A0A075B7D0 117 aa10.28□□□□□ -0.76
CACNA1C-231ENST00000616390 DEFB131AP59861 70 aa10.28□□□□□ -0.76
CACNA1C-231ENST00000616390 ZNF876PQ49A33 203 aa10.28□□□□□ -0.76
CACNA1C-231ENST00000616390 ZFP2Q6ZN57 461 aa10.28□□□□□ -0.76
CACNA1C-231ENST00000616390 CEND1Q8N111 149 aa10.28□□□□□ -0.76
CACNA1C-231ENST00000616390 ZNF843Q8N446 348 aa10.28□□□□□ -0.76
CACNA1C-231ENST00000616390 KIR2DL4Q99706 377 aa10.28□□□□□ -0.76
CACNA1C-231ENST00000616390 ZNF580Q9UK33 172 aa10.28□□□□□ -0.76
CACNA1C-231ENST00000616390 TRAV12-1A0A0B4J245 112 aa10.28□□□□□ -0.76
CACNA1C-231ENST00000616390 SAMD5Q5TGI4 173 aa10.28□□□□□ -0.76
CACNA1C-231ENST00000616390 KLHL30-AS1Q8NEE0 82 aa10.28□□□□□ -0.76
CACNA1C-231ENST00000616390 UBE2E2Q96LR5 201 aa10.27□□□□□ -0.77
CACNA1C-231ENST00000616390 OPRPNQ99935 248 aaPredicted RBP10.27□□□□□ -0.77
CACNA1C-231ENST00000616390 MTORP42345 2549 aa10.27□□□□□ -0.77
CACNA1C-231ENST00000616390 PPP1R17O96001 155 aa10.27□□□□□ -0.77
CACNA1C-231ENST00000616390 ELANEP08246 267 aa10.27□□□□□ -0.77
CACNA1C-231ENST00000616390 HIGD1BQ9P298 99 aa10.27□□□□□ -0.77
CACNA1C-231ENST00000616390 AKAP9Q99996 3911 aa10.27□□□□□ -0.77
CACNA1C-231ENST00000616390 F8W1H4 67 aa10.26□□□□□ -0.77
CACNA1C-231ENST00000616390 RHODO00212 210 aa10.26□□□□□ -0.77
CACNA1C-231ENST00000616390 C6orf226Q5I0X4 101 aa10.26□□□□□ -0.77
CACNA1C-231ENST00000616390 A0A1B0GX51 115 aa10.26□□□□□ -0.77
CACNA1C-231ENST00000616390 VCYO14598 125 aa10.26□□□□□ -0.77
CACNA1C-231ENST00000616390 NXPH4O95158 308 aa10.26□□□□□ -0.77
CACNA1C-231ENST00000616390 TSHBP01222 138 aa10.26□□□□□ -0.77
CACNA1C-231ENST00000616390 FABP2P12104 132 aa10.26□□□□□ -0.77
CACNA1C-231ENST00000616390 POLR2KP53803 58 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms