RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 RPL39LQ96EH5 51 aaKnown RBP9.77□□□□□ -0.85
TCF4-248ENST00000616053 IGHV1-58A0A0C4DH39 117 aa9.76□□□□□ -0.85
TCF4-248ENST00000616053 Q8N1Y9 231 aa9.76□□□□□ -0.85
TCF4-248ENST00000616053 LINC00311Q8N616 119 aa9.76□□□□□ -0.85
TCF4-248ENST00000616053 RBAKDNA6NC62 111 aa9.76□□□□□ -0.85
TCF4-248ENST00000616053 LINC00114Q6XXX2 140 aa9.76□□□□□ -0.85
TCF4-248ENST00000616053 LENEPQ9Y5L5 61 aa9.76□□□□□ -0.85
TCF4-248ENST00000616053 RETNLBQ9BQ08 111 aa9.76□□□□□ -0.85
TCF4-248ENST00000616053 PNRC2Q9NPJ4 139 aaKnown RBP9.76□□□□□ -0.85
TCF4-248ENST00000616053 LGALS9BQ3B8N2 356 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 LGALS9CQ6DKI2 356 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 KLHDC3Q9BQ90 382 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 AGPAT4-IT1Q9H0P7 198 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 LRP5O75197 1615 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 ZNF236Q9UL36 1845 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 SYCNQ0VAF6 134 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 A6NDX4 124 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 SPINK1P00995 79 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 Q6ZVH6 145 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 TRBV6-6A0A0A6YYG2 114 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 SMIM9A6NGZ8 99 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 LCTP09848 1927 aa9.75□□□□□ -0.85
TCF4-248ENST00000616053 IGKV2-28A0A075B6P5 120 aa9.74□□□□□ -0.85
TCF4-248ENST00000616053 IGKV2D-28P01615 120 aa9.74□□□□□ -0.85
TCF4-248ENST00000616053 DIAPH2-AS1Q14236 149 aa9.74□□□□□ -0.85
TCF4-248ENST00000616053 WIPF3A6NGB9 483 aa9.74□□□□□ -0.85
TCF4-248ENST00000616053 LY6G6DO95868 133 aa9.74□□□□□ -0.85
TCF4-248ENST00000616053 C17orf58Q2M2W7 97 aa9.74□□□□□ -0.85
TCF4-248ENST00000616053 CHCHD10Q8WYQ3 142 aaPredicted RBP9.74□□□□□ -0.85
TCF4-248ENST00000616053 CXCL1P09341 107 aa9.74□□□□□ -0.85
TCF4-248ENST00000616053 RPL28P46779 137 aaKnown RBP9.74□□□□□ -0.85
TCF4-248ENST00000616053 SIPA1L3O60292 1781 aaPredicted RBP9.74□□□□□ -0.85
TCF4-248ENST00000616053 A0A0J9YXV3 536 aa9.74□□□□□ -0.85
TCF4-248ENST00000616053 C11orf52Q96A22 123 aa9.74□□□□□ -0.85
TCF4-248ENST00000616053 IGLV2-14P01704 120 aa9.74□□□□□ -0.85
TCF4-248ENST00000616053 PTPRFP10586 1907 aa9.74□□□□□ -0.85
TCF4-248ENST00000616053 HIST2H2BDQ6DRA6 164 aa9.73□□□□□ -0.85
TCF4-248ENST00000616053 SCXQ7RTU7 201 aa9.73□□□□□ -0.85
TCF4-248ENST00000616053 Q8N976 141 aa9.73□□□□□ -0.85
TCF4-248ENST00000616053 SRSF3P84103 164 aaKnown RBP9.73□□□□□ -0.85
TCF4-248ENST00000616053 ARID2Q68CP9 1835 aa9.73□□□□□ -0.85
TCF4-248ENST00000616053 FAM236AA0A1B0GUQ0 79 aa9.73□□□□□ -0.85
TCF4-248ENST00000616053 FAM236BA0A1B0GV22 79 aa9.73□□□□□ -0.85
TCF4-248ENST00000616053 WFDC13Q8IUB5 93 aa9.73□□□□□ -0.85
TCF4-248ENST00000616053 MIFP14174 115 aa9.73□□□□□ -0.85
TCF4-248ENST00000616053 ALPK3Q96L96 1907 aa9.73□□□□□ -0.85
TCF4-248ENST00000616053 TRAV23DV6A0A075B6W5 121 aa9.73□□□□□ -0.85
TCF4-248ENST00000616053 SBF2Q86WG5 1849 aa9.73□□□□□ -0.85
TCF4-248ENST00000616053 RREB1Q92766 1687 aa9.72□□□□□ -0.85
TCF4-248ENST00000616053 IGLC1P0CG04 106 aa9.72□□□□□ -0.85
TCF4-248ENST00000616053 C12orf74Q32Q52 190 aa9.72□□□□□ -0.85
TCF4-248ENST00000616053 LINC00482Q8N8I6 264 aa9.72□□□□□ -0.85
TCF4-248ENST00000616053 A4D1N5 150 aa9.72□□□□□ -0.85
TCF4-248ENST00000616053 DKK2Q9UBU2 259 aa9.72□□□□□ -0.85
TCF4-248ENST00000616053 SLX1AQ9BQ83 275 aa9.72□□□□□ -0.85
TCF4-248ENST00000616053 XAGE1AQ9HD64 81 aa9.72□□□□□ -0.85
TCF4-248ENST00000616053 WT1P19544 449 aaPredicted RBP9.72□□□□□ -0.85
TCF4-248ENST00000616053 HIST3H2BBQ8N257 126 aa9.72□□□□□ -0.85
TCF4-248ENST00000616053 C20orf144Q9BQM9 153 aa9.71□□□□□ -0.85
TCF4-248ENST00000616053 LOC107984640A0A0U1RRK4 108 aa9.71□□□□□ -0.85
TCF4-248ENST00000616053 B3GALT5-AS1P59052 145 aa9.71□□□□□ -0.85
TCF4-248ENST00000616053 WT1-ASQ06250 92 aa9.71□□□□□ -0.85
TCF4-248ENST00000616053 LYPD6Q86Y78 171 aa9.71□□□□□ -0.85
TCF4-248ENST00000616053 TANC1Q9C0D5 1861 aa9.71□□□□□ -0.85
TCF4-248ENST00000616053 A0A1W2PPM0 123 aa9.71□□□□□ -0.86
TCF4-248ENST00000616053 C18orf32Q8TCD1 76 aa9.71□□□□□ -0.86
TCF4-248ENST00000616053 C3orf84H3BNL1 204 aa9.7□□□□□ -0.86
TCF4-248ENST00000616053 C5orf56Q8N8D9 126 aa9.7□□□□□ -0.86
TCF4-248ENST00000616053 TEN1Q86WV5 123 aa9.7□□□□□ -0.86
TCF4-248ENST00000616053 ABCA2Q9BZC7 2435 aa9.7□□□□□ -0.86
TCF4-248ENST00000616053 PSME4Q14997 1843 aa9.7□□□□□ -0.86
TCF4-248ENST00000616053 UBR3Q6ZT12 1888 aa9.7□□□□□ -0.86
TCF4-248ENST00000616053 V9GYY9 64 aa9.7□□□□□ -0.86
TCF4-248ENST00000616053 TRBV10-1A0A0K0K1A3 114 aa9.7□□□□□ -0.86
TCF4-248ENST00000616053 IGLC7A0M8Q6 106 aa9.7□□□□□ -0.86
TCF4-248ENST00000616053 ASPHD1Q5U4P2 390 aa9.7□□□□□ -0.86
TCF4-248ENST00000616053 COX8AP10176 69 aa9.69□□□□□ -0.86
TCF4-248ENST00000616053 TNRC6BQ9UPQ9 1833 aaKnown RBP9.69□□□□□ -0.86
TCF4-248ENST00000616053 MAP6D1Q9H9H5 199 aa9.69□□□□□ -0.86
TCF4-248ENST00000616053 C10orf25Q5T742 122 aa9.69□□□□□ -0.86
TCF4-248ENST00000616053 KAAG1Q9UBP8 84 aa9.69□□□□□ -0.86
TCF4-248ENST00000616053 G3V4G9 280 aa9.69□□□□□ -0.86
TCF4-248ENST00000616053 FAM215AQ9Y5M1 114 aa9.69□□□□□ -0.86
TCF4-248ENST00000616053 TNRC6CQ9HCJ0 1690 aaKnown RBP9.68□□□□□ -0.86
TCF4-248ENST00000616053 SPANXB1Q9NS25 103 aaPredicted RBP9.68□□□□□ -0.86
TCF4-248ENST00000616053 MGAMO43451 1857 aa9.68□□□□□ -0.86
TCF4-248ENST00000616053 SERTAD4-AS1Q5TG53 156 aa9.68□□□□□ -0.86
TCF4-248ENST00000616053 B5MCH6 92 aa9.68□□□□□ -0.86
TCF4-248ENST00000616053 ZFAND2AQ8N6M9 145 aa9.68□□□□□ -0.86
TCF4-248ENST00000616053 PKD1L3Q7Z443 1732 aa9.68□□□□□ -0.86
TCF4-248ENST00000616053 IGHV7-81A0A0B4J1V7 117 aa9.68□□□□□ -0.86
TCF4-248ENST00000616053 TRBV6-1A0A0K0K1D8 114 aa9.68□□□□□ -0.86
TCF4-248ENST00000616053 FAM240AA0A1B0GVK7 77 aa9.68□□□□□ -0.86
TCF4-248ENST00000616053 K7EP34 96 aa9.68□□□□□ -0.86
TCF4-248ENST00000616053 LHFPL1Q86WI0 220 aa9.68□□□□□ -0.86
TCF4-248ENST00000616053 ATG2AQ2TAZ0 1938 aa9.67□□□□□ -0.86
TCF4-248ENST00000616053 RPL37AP8A6NKH3 93 aa9.67□□□□□ -0.86
TCF4-248ENST00000616053 C1orf134Q5TEV5 83 aa9.67□□□□□ -0.86
TCF4-248ENST00000616053 J3KT08 172 aa9.67□□□□□ -0.86
TCF4-248ENST00000616053 LRRC75A-AS1Q8N1F1 130 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms