RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 BRD3OSQ6XYD6 125 aa9.92□□□□□ -0.82
MSH6-214ENST00000616033 TRAV41A0A0B4J266 112 aa9.92□□□□□ -0.82
MSH6-214ENST00000616033 A8MZ25 164 aa9.92□□□□□ -0.82
MSH6-214ENST00000616033 COX6B1P14854 86 aa9.92□□□□□ -0.82
MSH6-214ENST00000616033 A0A0J9YXV3 536 aa9.91□□□□□ -0.82
MSH6-214ENST00000616033 CEMP1Q6PRD7 247 aaPredicted RBP9.91□□□□□ -0.82
MSH6-214ENST00000616033 ZFAND2AQ8N6M9 145 aa9.91□□□□□ -0.82
MSH6-214ENST00000616033 ATP6V0E2Q8NHE4 81 aa9.91□□□□□ -0.82
MSH6-214ENST00000616033 CDSNQ15517 529 aa9.91□□□□□ -0.82
MSH6-214ENST00000616033 SUMO4Q6EEV6 95 aa9.91□□□□□ -0.82
MSH6-214ENST00000616033 DAND5Q8N907 189 aa9.91□□□□□ -0.82
MSH6-214ENST00000616033 PKD1L2Q7Z442 2459 aa9.91□□□□□ -0.82
MSH6-214ENST00000616033 SRSF2Q01130 221 aaKnown RBP9.91□□□□□ -0.82
MSH6-214ENST00000616033 C9orf47Q6ZRZ4 202 aa9.91□□□□□ -0.82
MSH6-214ENST00000616033 FAM110DQ8TAY7 271 aaPredicted RBP9.91□□□□□ -0.82
MSH6-214ENST00000616033 PSMG3-AS1Q96PY0 264 aa9.91□□□□□ -0.82
MSH6-214ENST00000616033 CSMD2Q7Z408 3487 aa9.91□□□□□ -0.82
MSH6-214ENST00000616033 KLK9Q9UKQ9 250 aa9.9□□□□□ -0.82
MSH6-214ENST00000616033 TRAV8-3A0A0A6YYJ7 113 aa9.9□□□□□ -0.82
MSH6-214ENST00000616033 FAM208BQ5VWN6 2430 aa9.9□□□□□ -0.82
MSH6-214ENST00000616033 TRGV11A0A075B6L2 103 aa9.89□□□□□ -0.83
MSH6-214ENST00000616033 RNASE3P12724 160 aaKnown RBP9.89□□□□□ -0.83
MSH6-214ENST00000616033 CLEC2BQ92478 149 aa9.89□□□□□ -0.83
MSH6-214ENST00000616033 VPS13CQ709C8 3753 aa9.89□□□□□ -0.83
MSH6-214ENST00000616033 TLN2Q9Y4G6 2542 aa9.89□□□□□ -0.83
MSH6-214ENST00000616033 FAM19A5Q7Z5A7 132 aaPredicted RBP9.89□□□□□ -0.83
MSH6-214ENST00000616033 GPHB5Q86YW7 130 aa9.89□□□□□ -0.83
MSH6-214ENST00000616033 SLC25A29Q8N8R3 303 aa9.89□□□□□ -0.83
MSH6-214ENST00000616033 LY6G5BQ8NDX9 201 aa9.88□□□□□ -0.83
MSH6-214ENST00000616033 ODF3BA8MYP8 253 aa9.88□□□□□ -0.83
MSH6-214ENST00000616033 RNF223E7ERA6 249 aa9.88□□□□□ -0.83
MSH6-214ENST00000616033 NSUN5P1Q3KNT7 163 aa9.88□□□□□ -0.83
MSH6-214ENST00000616033 C2orf82Q6UX34 121 aa9.88□□□□□ -0.83
MSH6-214ENST00000616033 MYO18BQ8IUG5 2567 aa9.88□□□□□ -0.83
MSH6-214ENST00000616033 ZNF22P17026 224 aaPredicted RBP9.88□□□□□ -0.83
MSH6-214ENST00000616033 ZNF625Q96I27 306 aaPredicted RBP9.88□□□□□ -0.83
MSH6-214ENST00000616033 IGHV3-33P01772 117 aa9.87□□□□□ -0.83
MSH6-214ENST00000616033 KNCNA6PVL3 124 aa9.87□□□□□ -0.83
MSH6-214ENST00000616033 SONP18583 2426 aaKnown RBP9.87□□□□□ -0.83
MSH6-214ENST00000616033 POLQO75417 2590 aa9.87□□□□□ -0.83
MSH6-214ENST00000616033 SMIM9A6NGZ8 99 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 VCYO14598 125 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 EIF4EBP3O60516 100 aaPredicted RBP9.86□□□□□ -0.83
MSH6-214ENST00000616033 PRM2P04554 102 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 KLRB1Q12918 225 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 LINC01620Q4KN68 170 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 C9orf139Q6ZV77 190 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 MDFICQ9P1T7 246 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 C5orf47Q569G3 176 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 VCX2Q9H322 139 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 P0DMU3 169 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 FAM231AP0DMU4 169 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 FAM231CP0DMU5 169 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 HERVK_113P63121 156 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 ZNF876PQ49A33 203 aa9.86□□□□□ -0.83
MSH6-214ENST00000616033 IGIPA6NJ69 53 aa9.85□□□□□ -0.83
MSH6-214ENST00000616033 RHPN1-AS1Q9BWJ2 59 aa9.85□□□□□ -0.83
MSH6-214ENST00000616033 M0R1W7 72 aa9.85□□□□□ -0.83
MSH6-214ENST00000616033 NPFFO15130 113 aa9.85□□□□□ -0.83
MSH6-214ENST00000616033 TMEM190Q8WZ59 177 aa9.85□□□□□ -0.83
MSH6-214ENST00000616033 USP9XQ93008 2570 aaPredicted RBP9.85□□□□□ -0.83
MSH6-214ENST00000616033 ITPR1Q14643 2758 aa9.85□□□□□ -0.83
MSH6-214ENST00000616033 CENPVL3A0A0U1RRI6 287 aa9.85□□□□□ -0.83
MSH6-214ENST00000616033 TRIAP1O43715 76 aa9.85□□□□□ -0.83
MSH6-214ENST00000616033 HRCT1Q6UXD1 115 aa9.85□□□□□ -0.83
MSH6-214ENST00000616033 ODF3Q96PU9 254 aa9.85□□□□□ -0.83
MSH6-214ENST00000616033 IGHV4-4A0A075B6R2 117 aa9.84□□□□□ -0.83
MSH6-214ENST00000616033 Q8N6K4 173 aa9.84□□□□□ -0.83
MSH6-214ENST00000616033 ATXN8Q156A1 80 aa9.84□□□□□ -0.83
MSH6-214ENST00000616033 PAPPA-AS1Q5QFB9 102 aa9.84□□□□□ -0.83
MSH6-214ENST00000616033 H3BMM0 161 aa9.84□□□□□ -0.83
MSH6-214ENST00000616033 UBE2E1P51965 193 aa9.84□□□□□ -0.83
MSH6-214ENST00000616033 UBE2WQ96B02 151 aa9.84□□□□□ -0.83
MSH6-214ENST00000616033 DUX5Q96PT3 197 aa9.84□□□□□ -0.83
MSH6-214ENST00000616033 LINC01619G3V211 115 aa9.83□□□□□ -0.84
MSH6-214ENST00000616033 SPINK13Q1W4C9 94 aa9.83□□□□□ -0.84
MSH6-214ENST00000616033 TRBV7-1A0A0A6YYK4 115 aa9.83□□□□□ -0.84
MSH6-214ENST00000616033 OVOL1O14753 267 aa9.82□□□□□ -0.84
MSH6-214ENST00000616033 CD28P10747 220 aa9.82□□□□□ -0.84
MSH6-214ENST00000616033 PROK1P58294 105 aa9.82□□□□□ -0.84
MSH6-214ENST00000616033 MINOS1Q5TGZ0 78 aa9.82□□□□□ -0.84
MSH6-214ENST00000616033 TMEM263Q8WUH6 116 aaKnown RBP9.82□□□□□ -0.84
MSH6-214ENST00000616033 JMJD1CQ15652 2540 aa9.82□□□□□ -0.84
MSH6-214ENST00000616033 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
MSH6-214ENST00000616033 BPESC1Q9GZL8 116 aa9.81□□□□□ -0.84
MSH6-214ENST00000616033 hADV29S1A0JD25 119 aa9.81□□□□□ -0.84
MSH6-214ENST00000616033 POLR2KP53803 58 aaKnown RBP9.81□□□□□ -0.84
MSH6-214ENST00000616033 UTP20O75691 2785 aaKnown RBP9.81□□□□□ -0.84
MSH6-214ENST00000616033 FLNCQ14315 2725 aa9.81□□□□□ -0.84
MSH6-214ENST00000616033 PPP1R17O96001 155 aa9.81□□□□□ -0.84
MSH6-214ENST00000616033 KIR2DL5BQ8NHK3 375 aa9.81□□□□□ -0.84
MSH6-214ENST00000616033 TIMM21Q9BVV7 248 aa9.81□□□□□ -0.84
MSH6-214ENST00000616033 BLCAPP62952 87 aa9.8□□□□□ -0.84
MSH6-214ENST00000616033 C4orf26Q17RF5 130 aa9.8□□□□□ -0.84
MSH6-214ENST00000616033 DSCR8Q96T75 97 aa9.8□□□□□ -0.84
MSH6-214ENST00000616033 LINC01587Q99440 93 aa9.8□□□□□ -0.84
MSH6-214ENST00000616033 EPG5Q9HCE0 2579 aa9.8□□□□□ -0.84
MSH6-214ENST00000616033 A0A0J9YXY3 114 aa9.8□□□□□ -0.84
MSH6-214ENST00000616033 ADAMTSL4-AS1Q5T5F5 129 aa9.8□□□□□ -0.84
MSH6-214ENST00000616033 ITLN2Q8WWU7 325 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms