RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 ATP5G1P05496 136 aa5.62□□□□□ -1.51
PCDH9-205ENST00000614931 CKS2P33552 79 aa5.62□□□□□ -1.51
PCDH9-205ENST00000614931 VSIG2Q96IQ7 327 aa5.62□□□□□ -1.51
PCDH9-205ENST00000614931 A0A0J9YY99 117 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 F5H768 121 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 CIDEAO60543 219 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 HIST1H2BKO60814 126 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 TNFRSF6BO95407 300 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 HIST1H2BJP06899 126 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 LINC00694P0DN24 101 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 HIST1H2BOP23527 126 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 HIST1H2BBP33778 126 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 CRYBA4P53673 196 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 HIST1H2BDP58876 126 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 LINC00310P59036 64 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 HIST1H2BCP62807 126 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 HIST2H2BEQ16778 126 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 OR10J3Q5JRS4 329 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.61□□□□□ -1.51
PCDH9-205ENST00000614931 NEGR1Q7Z3B1 354 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 ORMDL3Q8N138 153 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 C18orf32Q8TCD1 76 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 DNAH7Q8WXX0 4024 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 LINC00476Q8WZB0 136 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 HIST1H2BHQ93079 126 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 URB1-AS1Q96HZ7 61 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 HIST1H2BNQ99877 126 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 HIST1H2BMQ99879 126 aa5.61□□□□□ -1.51
PCDH9-205ENST00000614931 STARD9Q9P2P6 4700 aa5.6□□□□□ -1.51
PCDH9-205ENST00000614931 IGLV2-18A0A075B6J9 118 aa5.6□□□□□ -1.51
PCDH9-205ENST00000614931 TRAV26-1A0A087WT03 109 aa5.6□□□□□ -1.51
PCDH9-205ENST00000614931 TRBV6-5A0A0K0K1A5 114 aa5.6□□□□□ -1.51
PCDH9-205ENST00000614931 C1orf196B1AJZ1 125 aa5.6□□□□□ -1.51
PCDH9-205ENST00000614931 PPBPP02775 128 aa5.6□□□□□ -1.51
PCDH9-205ENST00000614931 DEFB104AQ8WTQ1 72 aa5.6□□□□□ -1.51
PCDH9-205ENST00000614931 PHLDA1Q8WV24 401 aaPredicted RBP5.6□□□□□ -1.51
PCDH9-205ENST00000614931 NIT2Q9NQR4 276 aa5.6□□□□□ -1.51
PCDH9-205ENST00000614931 PRO0255Q9UI72 69 aa5.6□□□□□ -1.51
PCDH9-205ENST00000614931 KLK5Q9Y337 293 aaPredicted RBP5.6□□□□□ -1.51
PCDH9-205ENST00000614931 RYR2Q92736 4967 aa5.6□□□□□ -1.51
PCDH9-205ENST00000614931 DEFB131BA0A096LNP1 70 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 LOC389332A0A1B0GUA5 103 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 TRBV6-4A0A1B0GX49 114 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 GAGE12JA6NER3 117 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 PAX4O43316 350 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 GYPEP15421 78 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 POLR2KP53803 58 aaKnown RBP5.59□□□□□ -1.51
PCDH9-205ENST00000614931 GAGE1Q13065 139 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 GAGE4Q13068 117 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 GAGE5Q13069 117 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 RHOHQ15669 191 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 GAGE13Q4V321 117 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 TMEM70Q9BUB7 260 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 HHLA3Q9XRX5 114 aa5.59□□□□□ -1.51
PCDH9-205ENST00000614931 DYNC2H1Q8NCM8 4307 aaKnown RBP5.59□□□□□ -1.52
PCDH9-205ENST00000614931 TRAV10A0A0B4J240 114 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 IGHV3-38A0A0C4DH36 116 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 TRBV10-1A0A0K0K1A3 114 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 SDHAF1A6NFY7 115 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 PRSS47A8MTI9 375 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 H7C1H1 209 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 NUPR1O60356 82 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 LY6G6CO95867 125 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 IFI27P40305 119 aaPredicted RBP5.58□□□□□ -1.52
PCDH9-205ENST00000614931 UBE2D3P61077 147 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 SUMO2P61956 95 aaKnown RBP5.58□□□□□ -1.52
PCDH9-205ENST00000614931 UBE2D2P62837 147 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 ZNRF2Q8NHG8 242 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 C20orf78Q9BR46 151 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 SMIM2Q9BVW6 85 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 MAP1LC3AQ9H492 121 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 ST20Q9HBF5 79 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 LAMTOR2Q9Y2Q5 125 aa5.58□□□□□ -1.52
PCDH9-205ENST00000614931 TMA7Q9Y2S6 64 aaKnown RBP5.58□□□□□ -1.52
PCDH9-205ENST00000614931 A0A096LPF7 62 aa5.57□□□□□ -1.52
PCDH9-205ENST00000614931 TSHBP01222 138 aa5.57□□□□□ -1.52
PCDH9-205ENST00000614931 RAB5BP61020 215 aa5.57□□□□□ -1.52
PCDH9-205ENST00000614931 RPL32P62910 135 aaKnown RBP5.57□□□□□ -1.52
PCDH9-205ENST00000614931 RPL36AP83881 106 aaKnown RBP5.57□□□□□ -1.52
PCDH9-205ENST00000614931 Q0VG73 95 aa5.57□□□□□ -1.52
PCDH9-205ENST00000614931 RPL36ALQ969Q0 106 aaKnown RBP5.57□□□□□ -1.52
PCDH9-205ENST00000614931 DNAJC30Q96LL9 226 aa5.57□□□□□ -1.52
PCDH9-205ENST00000614931 PRADC1Q9BSG0 188 aa5.57□□□□□ -1.52
PCDH9-205ENST00000614931 TRBV7-3A0A075B6L6 115 aa5.56□□□□□ -1.52
PCDH9-205ENST00000614931 TRBV27A0A0K0K1C4 114 aa5.56□□□□□ -1.52
PCDH9-205ENST00000614931 TCAPO15273 167 aa5.56□□□□□ -1.52
PCDH9-205ENST00000614931 SERF1AO75920 110 aa5.56□□□□□ -1.52
PCDH9-205ENST00000614931 NDUFA6P56556 154 aa5.56□□□□□ -1.52
PCDH9-205ENST00000614931 COA6Q5JTJ3 125 aaKnown RBP5.56□□□□□ -1.52
PCDH9-205ENST00000614931 LGALS9CQ6DKI2 356 aa5.56□□□□□ -1.52
PCDH9-205ENST00000614931 NTM-AS1Q6ZSK4 140 aa5.56□□□□□ -1.52
PCDH9-205ENST00000614931 NIT1Q86X76 327 aa5.56□□□□□ -1.52
PCDH9-205ENST00000614931 Q8N8P6 123 aa5.56□□□□□ -1.52
PCDH9-205ENST00000614931 TNFRSF18Q9Y5U5 241 aa5.56□□□□□ -1.52
PCDH9-205ENST00000614931 SACSQ9NZJ4 4579 aa5.56□□□□□ -1.52
PCDH9-205ENST00000614931 A0A096LNJ9 63 aa5.55□□□□□ -1.52
PCDH9-205ENST00000614931 LINC01546A6NGU7 62 aa5.55□□□□□ -1.52
PCDH9-205ENST00000614931 PPP1R17O96001 155 aa5.55□□□□□ -1.52
PCDH9-205ENST00000614931 TCTAP57738 103 aa5.55□□□□□ -1.52
PCDH9-205ENST00000614931 RNASEKQ6P5S7 137 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms