RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 OXLD1Q5BKU9 147 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 PET117Q6UWS5 81 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 C2orf66Q6UXQ4 117 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 NDUFAF3Q9BU61 184 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 C19orf73Q9NVV2 129 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 M0R2P5 195 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 NXPH4O95158 308 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 NMUP48645 174 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 ANKRD39Q53RE8 183 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 RNASE13Q5GAN3 156 aaKnown RBP2.49□□□□□ -2.01
LIG4-205ENST00000614526 DNLZQ5SXM8 178 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 CEMP1Q6PRD7 247 aaPredicted RBP2.49□□□□□ -2.01
LIG4-205ENST00000614526 GTSCR1Q86UQ5 136 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 C11orf72Q8NBR9 251 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 ZNF479Q96JC4 524 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 MIEN1Q9BRT3 115 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 LAMTOR2Q9Y2Q5 125 aa2.49□□□□□ -2.01
LIG4-205ENST00000614526 DEFB130BP0DP73 79 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 DEFB130AP0DP74 79 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 HINT1P49773 126 aaPredicted RBP2.48□□□□□ -2.01
LIG4-205ENST00000614526 HNRNPA3P51991 378 aaKnown RBP2.48□□□□□ -2.01
LIG4-205ENST00000614526 BEAN1Q3B7T3 259 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 KRTAP24-1Q3LI83 254 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 LINC01545Q5VT33 79 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 CFAP126Q5VTH2 177 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 POM121L12Q8N7R1 296 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 KIR2DL4Q99706 377 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 C20orf144Q9BQM9 153 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 SNHG12Q9BXW3 62 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 MRPL35Q9NZE8 188 aaKnown RBP2.48□□□□□ -2.01
LIG4-205ENST00000614526 TP53TG1Q9Y2A0 90 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 TRGV2A0A075B6R0 118 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 A0A1B0GV90 55 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.48□□□□□ -2.01
LIG4-205ENST00000614526 ZFP2Q6ZN57 461 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 OR4C5Q8NGB2 326 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 C20orf78Q9BR46 151 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 PRSS29PA6NIE9 313 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 A8MTW9 85 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 VCYO14598 125 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 POLR2KP53803 58 aaKnown RBP2.48□□□□□ -2.01
LIG4-205ENST00000614526 RRN3P1Q2M238 152 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 DEFB135Q30KP9 77 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 PCP2Q8IVA1 136 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 UQCR10Q9UDW1 63 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 TNFRSF18Q9Y5U5 241 aa2.48□□□□□ -2.01
LIG4-205ENST00000614526 ODF1Q14990 250 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 ORMDL2Q53FV1 153 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 Q6ZVH6 145 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 ERASQ7Z444 233 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 C3orf56Q8N813 242 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 ZNRF2Q8NHG8 242 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 CITED1Q99966 193 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.47□□□□□ -2.01
LIG4-205ENST00000614526 IGKV2D-26A0A0A0MRZ7 120 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 TRAV8-6A0A0B4J262 113 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 LOC100131303A0A0U1RQF7 123 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 IGKV2-29A2NJV5 120 aaPredicted RBP2.47□□□□□ -2.01
LIG4-205ENST00000614526 GAGE12JA6NER3 117 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 A8MWV9 139 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 ATP5LO75964 103 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 PRB2P02812 416 aaPredicted RBP2.47□□□□□ -2.01
LIG4-205ENST00000614526 GAGE1Q13065 139 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 GAGE4Q13068 117 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 GAGE5Q13069 117 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 LGALS9BQ3B8N2 356 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 GAGE13Q4V321 117 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 C9orf66Q5T8R8 295 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 LGALS9CQ6DKI2 356 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 RNASE8Q8TDE3 154 aaKnown RBP2.47□□□□□ -2.01
LIG4-205ENST00000614526 CYSLTR1Q9Y271 337 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 M0R143 59 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 IGKCP01834 107 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 SLC25A34Q6PIV7 304 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 PRIMA1Q86XR5 153 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 BAALCQ8WXS3 180 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 TOMM6Q96B49 74 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 MGAM2Q2M2H8 2515 aa2.47□□□□□ -2.01
LIG4-205ENST00000614526 IGHV3-64A0A075B6Q5 118 aa2.46□□□□□ -2.01
LIG4-205ENST00000614526 A0A096LPF7 62 aa2.46□□□□□ -2.01
LIG4-205ENST00000614526 PRSS47A8MTI9 375 aa2.46□□□□□ -2.01
LIG4-205ENST00000614526 I3L3M4 83 aa2.46□□□□□ -2.01
LIG4-205ENST00000614526 K7EMI3 77 aa2.46□□□□□ -2.01
LIG4-205ENST00000614526 PPP1R17O96001 155 aa2.46□□□□□ -2.01
LIG4-205ENST00000614526 TSHBP01222 138 aa2.46□□□□□ -2.01
LIG4-205ENST00000614526 MPV17L2Q567V2 206 aa2.46□□□□□ -2.01
LIG4-205ENST00000614526 NEXN-AS1Q8NBZ9 246 aa2.46□□□□□ -2.01
LIG4-205ENST00000614526 CSNK1G2-AS1Q8NCQ2 148 aa2.46□□□□□ -2.01
LIG4-205ENST00000614526 TMEM263Q8WUH6 116 aaKnown RBP2.46□□□□□ -2.01
LIG4-205ENST00000614526 CHTOPQ9Y3Y2 248 aaKnown RBP2.46□□□□□ -2.01
LIG4-205ENST00000614526 TRBV27A0A0K0K1C4 114 aa2.46□□□□□ -2.02
LIG4-205ENST00000614526 LINC01546A6NGU7 62 aa2.46□□□□□ -2.02
LIG4-205ENST00000614526 DPM2O94777 84 aa2.46□□□□□ -2.02
LIG4-205ENST00000614526 SLC25A29Q8N8R3 303 aa2.46□□□□□ -2.02
LIG4-205ENST00000614526 SPXQ9BT56 116 aa2.46□□□□□ -2.02
LIG4-205ENST00000614526 HHLA3Q9XRX5 114 aa2.46□□□□□ -2.02
LIG4-205ENST00000614526 A0A087WX48 190 aa2.46□□□□□ -2.02
LIG4-205ENST00000614526 TRGV4A0A0C4DH28 118 aa2.46□□□□□ -2.02
LIG4-205ENST00000614526 PLAC8L1A1L4L8 177 aa2.46□□□□□ -2.02
LIG4-205ENST00000614526 H7C1H1 209 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms