RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 RPL11P62913 178 aaKnown RBP12.3□□□□□ -0.44
TSKU-205ENST00000612930 RHOHQ15669 191 aa12.3□□□□□ -0.44
TSKU-205ENST00000612930 DEFB121Q5J5C9 76 aa12.3□□□□□ -0.44
TSKU-205ENST00000612930 IGLV4-3A0A075B6K6 122 aa12.3□□□□□ -0.44
TSKU-205ENST00000612930 FAM240AA0A1B0GVK7 77 aa12.3□□□□□ -0.44
TSKU-205ENST00000612930 PRSS2P07478 247 aa12.3□□□□□ -0.44
TSKU-205ENST00000612930 EP300Q09472 2414 aaPredicted RBP12.3□□□□□ -0.44
TSKU-205ENST00000612930 SPTBN2O15020 2390 aa12.29□□□□□ -0.44
TSKU-205ENST00000612930 C20orf203Q8NBC4 194 aa12.29□□□□□ -0.44
TSKU-205ENST00000612930 LINC01587Q99440 93 aa12.29□□□□□ -0.44
TSKU-205ENST00000612930 SPXQ9BT56 116 aa12.29□□□□□ -0.44
TSKU-205ENST00000612930 TNFRSF18Q9Y5U5 241 aa12.29□□□□□ -0.44
TSKU-205ENST00000612930 PRRC2AP48634 2157 aaKnown RBP12.29□□□□□ -0.44
TSKU-205ENST00000612930 TRBV7-7A0A0K0K1E9 115 aa12.28□□□□□ -0.44
TSKU-205ENST00000612930 SAA4P35542 130 aa12.28□□□□□ -0.44
TSKU-205ENST00000612930 C5orf56Q8N8D9 126 aa12.28□□□□□ -0.44
TSKU-205ENST00000612930 ANKRD11Q6UB99 2663 aaPredicted RBP12.28□□□□□ -0.44
TSKU-205ENST00000612930 ACACAQ13085 2346 aa12.27□□□□□ -0.44
TSKU-205ENST00000612930 TRAV8-3A0A0A6YYJ7 113 aa12.27□□□□□ -0.44
TSKU-205ENST00000612930 LST1O00453 97 aa12.27□□□□□ -0.44
TSKU-205ENST00000612930 NDUFA4O00483 81 aa12.27□□□□□ -0.45
TSKU-205ENST00000612930 C19orf54Q5BKX5 351 aa12.27□□□□□ -0.45
TSKU-205ENST00000612930 RELNP78509 3460 aa12.26□□□□□ -0.45
TSKU-205ENST00000612930 TRAV41A0A0B4J266 112 aa12.26□□□□□ -0.45
TSKU-205ENST00000612930 TRAV12-3A0A0B4J271 114 aa12.26□□□□□ -0.45
TSKU-205ENST00000612930 FAM223BA6NKX1 122 aa12.26□□□□□ -0.45
TSKU-205ENST00000612930 FAM223AQ8IWN6 122 aa12.26□□□□□ -0.45
TSKU-205ENST00000612930 TIMM21Q9BVV7 248 aa12.26□□□□□ -0.45
TSKU-205ENST00000612930 SPANXDQ9BXN6 97 aa12.26□□□□□ -0.45
TSKU-205ENST00000612930 SPANXCQ9NY87 97 aa12.26□□□□□ -0.45
TSKU-205ENST00000612930 BDP1A6H8Y1 2624 aa12.26□□□□□ -0.45
TSKU-205ENST00000612930 COX6CP09669 75 aa12.26□□□□□ -0.45
TSKU-205ENST00000612930 NPC2P61916 151 aa12.26□□□□□ -0.45
TSKU-205ENST00000612930 I3L3M4 83 aa12.25□□□□□ -0.45
TSKU-205ENST00000612930 FAM104AQ969W3 186 aa12.25□□□□□ -0.45
TSKU-205ENST00000612930 AKAP13Q12802 2813 aa12.25□□□□□ -0.45
TSKU-205ENST00000612930 TRGV11A0A075B6L2 103 aa12.25□□□□□ -0.45
TSKU-205ENST00000612930 TMEM219Q86XT9 240 aa12.25□□□□□ -0.45
TSKU-205ENST00000612930 C9orf85Q96MD7 179 aa12.25□□□□□ -0.45
TSKU-205ENST00000612930 ANKHD1Q8IWZ3 2542 aaKnown RBP12.25□□□□□ -0.45
TSKU-205ENST00000612930 OTOGLQ3ZCN5 2332 aa12.25□□□□□ -0.45
TSKU-205ENST00000612930 TMEM126AQ9H061 195 aa12.24□□□□□ -0.45
TSKU-205ENST00000612930 TMEM95Q3KNT9 176 aa12.24□□□□□ -0.45
TSKU-205ENST00000612930 IGHV3-16A0A0C4DH30 117 aa12.24□□□□□ -0.45
TSKU-205ENST00000612930 MIAQ16674 131 aa12.24□□□□□ -0.45
TSKU-205ENST00000612930 C11orf71Q6IPW1 123 aa12.24□□□□□ -0.45
TSKU-205ENST00000612930 VPREB3Q9UKI3 123 aa12.24□□□□□ -0.45
TSKU-205ENST00000612930 NDUFA12Q9UI09 145 aa12.23□□□□□ -0.45
TSKU-205ENST00000612930 A8MZ25 164 aa12.23□□□□□ -0.45
TSKU-205ENST00000612930 MRPS36P82909 103 aaKnown RBP12.23□□□□□ -0.45
TSKU-205ENST00000612930 RHPN1-AS1Q9BWJ2 59 aa12.23□□□□□ -0.45
TSKU-205ENST00000612930 PPDPFQ9H3Y8 114 aa12.23□□□□□ -0.45
TSKU-205ENST00000612930 IGHV1-58A0A0C4DH39 117 aa12.22□□□□□ -0.45
TSKU-205ENST00000612930 TMEM61Q8N0U2 210 aa12.22□□□□□ -0.45
TSKU-205ENST00000612930 ZFHX3Q15911 3703 aa12.22□□□□□ -0.45
TSKU-205ENST00000612930 GVINP1Q7Z2Y8 2422 aa12.22□□□□□ -0.45
TSKU-205ENST00000612930 FAM236AA0A1B0GUQ0 79 aa12.22□□□□□ -0.45
TSKU-205ENST00000612930 FAM236BA0A1B0GV22 79 aa12.22□□□□□ -0.45
TSKU-205ENST00000612930 IGHV3-11P01762 117 aa12.22□□□□□ -0.45
TSKU-205ENST00000612930 TMEM101Q96IK0 257 aa12.22□□□□□ -0.45
TSKU-205ENST00000612930 HRNRQ86YZ3 2850 aaPredicted RBP12.22□□□□□ -0.45
TSKU-205ENST00000612930 CEMP1Q6PRD7 247 aaPredicted RBP12.21□□□□□ -0.45
TSKU-205ENST00000612930 EDN2P20800 178 aa12.21□□□□□ -0.46
TSKU-205ENST00000612930 DEFB123Q8N688 67 aa12.21□□□□□ -0.46
TSKU-205ENST00000612930 ASH1LQ9NR48 2969 aaKnown RBP12.2□□□□□ -0.46
TSKU-205ENST00000612930 CD28P10747 220 aa12.2□□□□□ -0.46
TSKU-205ENST00000612930 RNASE13Q5GAN3 156 aaKnown RBP12.2□□□□□ -0.46
TSKU-205ENST00000612930 SMCR5Q8TEV8 140 aa12.19□□□□□ -0.46
TSKU-205ENST00000612930 VSIG2Q96IQ7 327 aa12.19□□□□□ -0.46
TSKU-205ENST00000612930 TRAV12-2A0A075B6T6 113 aa12.18□□□□□ -0.46
TSKU-205ENST00000612930 PYGO1Q9Y3Y4 419 aa12.18□□□□□ -0.46
TSKU-205ENST00000612930 NPFFO15130 113 aa12.18□□□□□ -0.46
TSKU-205ENST00000612930 CDSNQ15517 529 aa12.18□□□□□ -0.46
TSKU-205ENST00000612930 IMUPQ9GZP8 106 aa12.17□□□□□ -0.46
TSKU-205ENST00000612930 MOB4Q9Y3A3 225 aa12.17□□□□□ -0.46
TSKU-205ENST00000612930 DAND5Q8N907 189 aa12.17□□□□□ -0.46
TSKU-205ENST00000612930 DCANP1Q8TF63 244 aa12.16□□□□□ -0.46
TSKU-205ENST00000612930 CITED2Q99967 270 aaPredicted RBP12.16□□□□□ -0.46
TSKU-205ENST00000612930 FBXL19-AS1Q494R0 122 aa12.16□□□□□ -0.46
TSKU-205ENST00000612930 DUX5Q96PT3 197 aa12.16□□□□□ -0.46
TSKU-205ENST00000612930 IGKV3-20P01619 116 aa12.15□□□□□ -0.46
TSKU-205ENST00000612930 ACYP1P07311 99 aa12.15□□□□□ -0.46
TSKU-205ENST00000612930 LINC00694P0DN24 101 aa12.15□□□□□ -0.46
TSKU-205ENST00000612930 YAE1D1Q9NRH1 226 aa12.15□□□□□ -0.46
TSKU-205ENST00000612930 LY6DQ14210 128 aa12.14□□□□□ -0.47
TSKU-205ENST00000612930 TINCRA0A1B0GVN0 87 aa12.14□□□□□ -0.47
TSKU-205ENST00000612930 ID1P41134 155 aa12.14□□□□□ -0.47
TSKU-205ENST00000612930 C3orf22Q8N5N4 141 aa12.14□□□□□ -0.47
TSKU-205ENST00000612930 DAZ1Q9NQZ3 744 aaKnown RBP12.14□□□□□ -0.47
TSKU-205ENST00000612930 SPTBN1Q01082 2364 aaKnown RBP12.13□□□□□ -0.47
TSKU-205ENST00000612930 IGHV3OR16-10A0A075B7F0 116 aa12.13□□□□□ -0.47
TSKU-205ENST00000612930 C9orf153Q5TBE3 101 aa12.13□□□□□ -0.47
TSKU-205ENST00000612930 IGHV1OR15-1A0A075B7D0 117 aa12.13□□□□□ -0.47
TSKU-205ENST00000612930 IGHG2P01859 326 aa12.13□□□□□ -0.47
TSKU-205ENST00000612930 USMG5Q96IX5 58 aa12.13□□□□□ -0.47
TSKU-205ENST00000612930 TIMM17BO60830 172 aa12.12□□□□□ -0.47
TSKU-205ENST00000612930 PROK1P58294 105 aa12.12□□□□□ -0.47
TSKU-205ENST00000612930 NDUFA7O95182 113 aa12.12□□□□□ -0.47
TSKU-205ENST00000612930 IGHV3-73A0A0B4J1V6 119 aa12.11□□□□□ -0.47
TSKU-205ENST00000612930 PF4V1P10720 104 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 274.4 ms