RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 PRO0255Q9UI72 69 aa9.03□□□□□ -0.96
PRKN-210ENST00000612540 HHLA3Q9XRX5 114 aa9.03□□□□□ -0.96
PRKN-210ENST00000612540 TENM2Q9NT68 2774 aa9.03□□□□□ -0.96
PRKN-210ENST00000612540 HYDINQ4G0P3 5121 aa9.03□□□□□ -0.96
PRKN-210ENST00000612540 TRAV26-1A0A087WT03 109 aa9.02□□□□□ -0.97
PRKN-210ENST00000612540 OR10J3Q5JRS4 329 aa9.02□□□□□ -0.97
PRKN-210ENST00000612540 ORMDL3Q8N138 153 aa9.02□□□□□ -0.97
PRKN-210ENST00000612540 SLC25A29Q8N8R3 303 aa9.02□□□□□ -0.97
PRKN-210ENST00000612540 RPL39LQ96EH5 51 aaKnown RBP9.02□□□□□ -0.97
PRKN-210ENST00000612540 PRELID3AQ96N28 172 aa9.02□□□□□ -0.97
PRKN-210ENST00000612540 TRBV6-4A0A1B0GX49 114 aa9.01□□□□□ -0.97
PRKN-210ENST00000612540 M0QY20 66 aa9.01□□□□□ -0.97
PRKN-210ENST00000612540 GAS8-AS1O95177 125 aa9.01□□□□□ -0.97
PRKN-210ENST00000612540 PPBPP02775 128 aa9.01□□□□□ -0.97
PRKN-210ENST00000612540 TRGC2P03986 189 aa9.01□□□□□ -0.97
PRKN-210ENST00000612540 GYPEP15421 78 aa9.01□□□□□ -0.97
PRKN-210ENST00000612540 CRYBA4P53673 196 aa9.01□□□□□ -0.97
PRKN-210ENST00000612540 PHLDA1Q8WV24 401 aaPredicted RBP9.01□□□□□ -0.97
PRKN-210ENST00000612540 LOC100131303A0A0U1RQF7 123 aa9□□□□□ -0.97
PRKN-210ENST00000612540 GAGE12JA6NER3 117 aa9□□□□□ -0.97
PRKN-210ENST00000612540 SRIP30626 198 aa9□□□□□ -0.97
PRKN-210ENST00000612540 GAGE1Q13065 139 aa9□□□□□ -0.97
PRKN-210ENST00000612540 GAGE4Q13068 117 aa9□□□□□ -0.97
PRKN-210ENST00000612540 GAGE5Q13069 117 aa9□□□□□ -0.97
PRKN-210ENST00000612540 GAGE13Q4V321 117 aa9□□□□□ -0.97
PRKN-210ENST00000612540 TNFRSF18Q9Y5U5 241 aa9□□□□□ -0.97
PRKN-210ENST00000612540 PPP1R17O96001 155 aa8.99□□□□□ -0.97
PRKN-210ENST00000612540 NPYP01303 97 aa8.99□□□□□ -0.97
PRKN-210ENST00000612540 RPL36AP83881 106 aaKnown RBP8.99□□□□□ -0.97
PRKN-210ENST00000612540 NEXN-AS1Q8NBZ9 246 aa8.99□□□□□ -0.97
PRKN-210ENST00000612540 RPL36ALQ969Q0 106 aaKnown RBP8.99□□□□□ -0.97
PRKN-210ENST00000612540 NIT2Q9NQR4 276 aa8.99□□□□□ -0.97
PRKN-210ENST00000612540 TRBV10-1A0A0K0K1A3 114 aa8.98□□□□□ -0.97
PRKN-210ENST00000612540 TNFRSF6BO95407 300 aa8.98□□□□□ -0.97
PRKN-210ENST00000612540 ZFAND6Q6FIF0 208 aa8.98□□□□□ -0.97
PRKN-210ENST00000612540 NRACQ8N912 160 aa8.98□□□□□ -0.97
PRKN-210ENST00000612540 ZNRF2Q8NHG8 242 aa8.98□□□□□ -0.97
PRKN-210ENST00000612540 VSIG2Q96IQ7 327 aa8.98□□□□□ -0.97
PRKN-210ENST00000612540 ST20Q9HBF5 79 aa8.98□□□□□ -0.97
PRKN-210ENST00000612540 Q9UF83 564 aa8.98□□□□□ -0.97
PRKN-210ENST00000612540 ICOSQ9Y6W8 199 aa8.98□□□□□ -0.97
PRKN-210ENST00000612540 IGLL5B9A064 214 aa8.97□□□□□ -0.97
PRKN-210ENST00000612540 NUDT3O95989 172 aa8.97□□□□□ -0.97
PRKN-210ENST00000612540 DNAJC30Q96LL9 226 aa8.97□□□□□ -0.97
PRKN-210ENST00000612540 ALKBH7Q9BT30 221 aaPredicted RBP8.97□□□□□ -0.97
PRKN-210ENST00000612540 MAP1LC3AQ9H492 121 aa8.97□□□□□ -0.97
PRKN-210ENST00000612540 LAMTOR2Q9Y2Q5 125 aa8.97□□□□□ -0.97
PRKN-210ENST00000612540 TRBV7-3A0A075B6L6 115 aa8.96□□□□□ -0.98
PRKN-210ENST00000612540 A0A096LPF7 62 aa8.96□□□□□ -0.98
PRKN-210ENST00000612540 LCE6AA0A183 80 aa8.96□□□□□ -0.98
PRKN-210ENST00000612540 LOC389332A0A1B0GUA5 103 aa8.96□□□□□ -0.98
PRKN-210ENST00000612540 C1orf196B1AJZ1 125 aa8.96□□□□□ -0.98
PRKN-210ENST00000612540 SUMO2P61956 95 aaKnown RBP8.96□□□□□ -0.98
PRKN-210ENST00000612540 NEGR1Q7Z3B1 354 aa8.96□□□□□ -0.98
PRKN-210ENST00000612540 IGHV3-38A0A0C4DH36 116 aa8.95□□□□□ -0.98
PRKN-210ENST00000612540 NUPR2A6NF83 97 aa8.95□□□□□ -0.98
PRKN-210ENST00000612540 SDHAF1A6NFY7 115 aa8.95□□□□□ -0.98
PRKN-210ENST00000612540 PHOX2AO14813 284 aa8.95□□□□□ -0.98
PRKN-210ENST00000612540 MRPL23Q16540 153 aaKnown RBP8.95□□□□□ -0.98
PRKN-210ENST00000612540 IQCJQ1A5X6 159 aa8.95□□□□□ -0.98
PRKN-210ENST00000612540 CEMP1Q6PRD7 247 aaPredicted RBP8.95□□□□□ -0.98
PRKN-210ENST00000612540 KLK5Q9Y337 293 aaPredicted RBP8.95□□□□□ -0.98
PRKN-210ENST00000612540 TRBV6-5A0A0K0K1A5 114 aa8.94□□□□□ -0.98
PRKN-210ENST00000612540 PMCHP20382 165 aa8.94□□□□□ -0.98
PRKN-210ENST00000612540 UBE2D3P61077 147 aa8.94□□□□□ -0.98
PRKN-210ENST00000612540 UBE2D2P62837 147 aa8.94□□□□□ -0.98
PRKN-210ENST00000612540 C15orf53Q8NAA6 179 aa8.94□□□□□ -0.98
PRKN-210ENST00000612540 ATP6V0E2Q8NHE4 81 aa8.94□□□□□ -0.98
PRKN-210ENST00000612540 DEFB104AQ8WTQ1 72 aa8.94□□□□□ -0.98
PRKN-210ENST00000612540 C20orf78Q9BR46 151 aa8.94□□□□□ -0.98
PRKN-210ENST00000612540 TMEM70Q9BUB7 260 aa8.94□□□□□ -0.98
PRKN-210ENST00000612540 SMIM2Q9BVW6 85 aa8.94□□□□□ -0.98
PRKN-210ENST00000612540 H3BNG1 76 aa8.93□□□□□ -0.98
PRKN-210ENST00000612540 RAB5BP61020 215 aa8.93□□□□□ -0.98
PRKN-210ENST00000612540 C18orf32Q8TCD1 76 aa8.93□□□□□ -0.98
PRKN-210ENST00000612540 LINC00694P0DN24 101 aa8.92□□□□□ -0.98
PRKN-210ENST00000612540 FCER1GP30273 86 aa8.92□□□□□ -0.98
PRKN-210ENST00000612540 COTL1Q14019 142 aa8.92□□□□□ -0.98
PRKN-210ENST00000612540 FA2HQ7L5A8 372 aa8.92□□□□□ -0.98
PRKN-210ENST00000612540 SH2D6Q7Z4S9 175 aa8.92□□□□□ -0.98
PRKN-210ENST00000612540 DAZ4Q86SG3 579 aaKnown RBP8.92□□□□□ -0.98
PRKN-210ENST00000612540 BAGE3Q86Y29 109 aa8.92□□□□□ -0.98
PRKN-210ENST00000612540 PRSS3P2Q8NHM4 247 aa8.92□□□□□ -0.98
PRKN-210ENST00000612540 DAZ3Q9NR90 486 aaKnown RBP8.92□□□□□ -0.98
PRKN-210ENST00000612540 I3L3M4 83 aa8.91□□□□□ -0.98
PRKN-210ENST00000612540 VCYO14598 125 aa8.91□□□□□ -0.98
PRKN-210ENST00000612540 HIST1H2BKO60814 126 aa8.91□□□□□ -0.98
PRKN-210ENST00000612540 HIST1H2BJP06899 126 aa8.91□□□□□ -0.98
PRKN-210ENST00000612540 HIST1H2BOP23527 126 aa8.91□□□□□ -0.98
PRKN-210ENST00000612540 HIST1H2BBP33778 126 aa8.91□□□□□ -0.98
PRKN-210ENST00000612540 IFI27P40305 119 aaPredicted RBP8.91□□□□□ -0.98
PRKN-210ENST00000612540 POLR2KP53803 58 aaKnown RBP8.91□□□□□ -0.98
PRKN-210ENST00000612540 HIST1H2BDP58876 126 aa8.91□□□□□ -0.98
PRKN-210ENST00000612540 HIST1H2BCP62807 126 aa8.91□□□□□ -0.98
PRKN-210ENST00000612540 HIST2H2BEQ16778 126 aa8.91□□□□□ -0.98
PRKN-210ENST00000612540 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.91□□□□□ -0.98
PRKN-210ENST00000612540 RNASEKQ6P5S7 137 aaKnown RBP8.91□□□□□ -0.98
PRKN-210ENST00000612540 HIST1H2BHQ93079 126 aa8.91□□□□□ -0.98
PRKN-210ENST00000612540 KIR2DL4Q99706 377 aa8.91□□□□□ -0.98
PRKN-210ENST00000612540 HIST1H2BNQ99877 126 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms