RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 LYPD1Q8N2G4 141 aa7.43□□□□□ -1.22
CTCFL-222ENST00000609232 DAZ1Q9NQZ3 744 aaKnown RBP7.43□□□□□ -1.22
CTCFL-222ENST00000609232 C11orf21Q9P2W6 132 aa7.43□□□□□ -1.22
CTCFL-222ENST00000609232 PRSS29PA6NIE9 313 aa7.42□□□□□ -1.22
CTCFL-222ENST00000609232 H3BUA1 57 aa7.42□□□□□ -1.22
CTCFL-222ENST00000609232 NPC2P61916 151 aa7.42□□□□□ -1.22
CTCFL-222ENST00000609232 PDE6HQ13956 83 aa7.42□□□□□ -1.22
CTCFL-222ENST00000609232 ZNF418Q8TF45 676 aaPredicted RBP7.42□□□□□ -1.22
CTCFL-222ENST00000609232 DKK2Q9UBU2 259 aa7.42□□□□□ -1.22
CTCFL-222ENST00000609232 SIGLEC8Q9NYZ4 499 aa7.42□□□□□ -1.22
CTCFL-222ENST00000609232 LTAP01374 205 aa7.42□□□□□ -1.22
CTCFL-222ENST00000609232 CRIP2P52943 208 aaPredicted RBP7.42□□□□□ -1.22
CTCFL-222ENST00000609232 ORMDL3Q8N138 153 aa7.42□□□□□ -1.22
CTCFL-222ENST00000609232 FOXC2Q99958 501 aa7.42□□□□□ -1.22
CTCFL-222ENST00000609232 CHAC1Q9BUX1 264 aa7.42□□□□□ -1.22
CTCFL-222ENST00000609232 MLST8Q9BVC4 326 aa7.42□□□□□ -1.22
CTCFL-222ENST00000609232 C19orf71A6NCJ1 209 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 NDUFA4O00483 81 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 DEFB130BP0DP73 79 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 DEFB130AP0DP74 79 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 CD28P10747 220 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 C19orf54Q5BKX5 351 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 MDFICQ9P1T7 246 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 CLPSL1A2RUU4 121 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 CCDC179H3BU77 68 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 MRPS12O15235 138 aaKnown RBP7.41□□□□□ -1.22
CTCFL-222ENST00000609232 IGHG4P01861 327 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 PROK1P58294 105 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 SNRPD3P62318 126 aaKnown RBP7.41□□□□□ -1.22
CTCFL-222ENST00000609232 GAGE13Q4V321 117 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 GTSCR1Q86UQ5 136 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 DLX4Q92988 240 aaPredicted RBP7.41□□□□□ -1.22
CTCFL-222ENST00000609232 KLF12Q9Y4X4 402 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 TSPAN13O95857 204 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 FSHBP01225 129 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 IGLV1-40P01703 118 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 TMEM61Q8N0U2 210 aa7.41□□□□□ -1.22
CTCFL-222ENST00000609232 APOMO95445 188 aa7.4□□□□□ -1.22
CTCFL-222ENST00000609232 HIST1H4GQ99525 98 aa7.4□□□□□ -1.22
CTCFL-222ENST00000609232 OPRPNQ99935 248 aaPredicted RBP7.4□□□□□ -1.22
CTCFL-222ENST00000609232 ZNF702PQ9H963 129 aa7.4□□□□□ -1.22
CTCFL-222ENST00000609232 NPIPB6E9PJ23 425 aa7.4□□□□□ -1.22
CTCFL-222ENST00000609232 MRPL51Q4U2R6 128 aaKnown RBP7.4□□□□□ -1.22
CTCFL-222ENST00000609232 C9orf139Q6ZV77 190 aa7.4□□□□□ -1.22
CTCFL-222ENST00000609232 PTH2Q96A98 100 aa7.4□□□□□ -1.22
CTCFL-222ENST00000609232 STAB2Q8WWQ8 2551 aa7.4□□□□□ -1.23
CTCFL-222ENST00000609232 F8W1H4 67 aa7.4□□□□□ -1.23
CTCFL-222ENST00000609232 PSMB8P28062 276 aa7.4□□□□□ -1.23
CTCFL-222ENST00000609232 ZNF876PQ49A33 203 aa7.4□□□□□ -1.23
CTCFL-222ENST00000609232 KIR2DL4Q99706 377 aa7.4□□□□□ -1.23
CTCFL-222ENST00000609232 SLC50A1Q9BRV3 221 aa7.4□□□□□ -1.23
CTCFL-222ENST00000609232 DNAJC9-AS1A6NH13 148 aa7.39□□□□□ -1.23
CTCFL-222ENST00000609232 ADARB2-AS1A8MUL3 147 aa7.39□□□□□ -1.23
CTCFL-222ENST00000609232 IGLV2-11P01706 119 aa7.39□□□□□ -1.23
CTCFL-222ENST00000609232 CEMP1Q6PRD7 247 aaPredicted RBP7.39□□□□□ -1.23
CTCFL-222ENST00000609232 TMEM190Q8WZ59 177 aa7.39□□□□□ -1.23
CTCFL-222ENST00000609232 SPANXB1Q9NS25 103 aaPredicted RBP7.39□□□□□ -1.23
CTCFL-222ENST00000609232 CYSLTR1Q9Y271 337 aa7.39□□□□□ -1.23
CTCFL-222ENST00000609232 ELANEP08246 267 aa7.38□□□□□ -1.23
CTCFL-222ENST00000609232 TTC32Q5I0X7 151 aa7.38□□□□□ -1.23
CTCFL-222ENST00000609232 TMEM158Q8WZ71 300 aa7.38□□□□□ -1.23
CTCFL-222ENST00000609232 ZNF625Q96I27 306 aaPredicted RBP7.38□□□□□ -1.23
CTCFL-222ENST00000609232 OR11H12B2RN74 326 aa7.38□□□□□ -1.23
CTCFL-222ENST00000609232 OR11H2Q8NH07 326 aa7.38□□□□□ -1.23
CTCFL-222ENST00000609232 ASIPP42127 132 aa7.38□□□□□ -1.23
CTCFL-222ENST00000609232 C11orf68Q9H3H3 251 aaKnown RBP7.38□□□□□ -1.23
CTCFL-222ENST00000609232 IGHV7-4-1A0A0J9YVY3 117 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 XGP55808 180 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 FOXI2Q6ZQN5 318 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 MAP1LC3AQ9H492 121 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 TRBV25-1A0A075B6N4 114 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 TRGV1A0A0A0MS02 117 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 IGLL5B9A064 214 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 IGKCP01834 107 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 FAM104BQ5XKR9 115 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 LINC00482Q8N8I6 264 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 Q9UF83 564 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 IGKV2D-26A0A0A0MRZ7 120 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 LOC107984156A0A0G2JMH3 177 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 ZNF561-AS1K7EIQ3 104 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 RPL39P62891 51 aaKnown RBP7.37□□□□□ -1.23
CTCFL-222ENST00000609232 KLK9Q2XQG4 91 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 TMEM170BQ5T4T1 132 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 Q6AWC8 147 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 ZFAND6Q6FIF0 208 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 ARL17AQ8IVW1 177 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 CEND1Q8N111 149 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 ERG28Q9UKR5 140 aa7.37□□□□□ -1.23
CTCFL-222ENST00000609232 LGALS1P09382 135 aaKnown RBP7.36□□□□□ -1.23
CTCFL-222ENST00000609232 A0A096LNJ9 63 aa7.36□□□□□ -1.23
CTCFL-222ENST00000609232 TRAV8-2A0A0B4J237 113 aa7.36□□□□□ -1.23
CTCFL-222ENST00000609232 LOC107984640A0A0U1RRK4 108 aa7.36□□□□□ -1.23
CTCFL-222ENST00000609232 GAGE12JA6NER3 117 aa7.36□□□□□ -1.23
CTCFL-222ENST00000609232 GAGE7O76087 117 aa7.36□□□□□ -1.23
CTCFL-222ENST00000609232 GAGE12FP0CL80 117 aa7.36□□□□□ -1.23
CTCFL-222ENST00000609232 GAGE12GP0CL81 117 aa7.36□□□□□ -1.23
CTCFL-222ENST00000609232 GAGE12IP0CL82 117 aa7.36□□□□□ -1.23
CTCFL-222ENST00000609232 GAGE4Q13068 117 aa7.36□□□□□ -1.23
CTCFL-222ENST00000609232 Q6ZSV7 163 aa7.36□□□□□ -1.23
CTCFL-222ENST00000609232 CSDC2Q9Y534 153 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms