RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 NANOS2P60321 138 aaKnown RBP8.5□□□□□ -1.05
SHKBP1-213ENST00000597325 UFSP1Q6NVU6 142 aa8.5□□□□□ -1.05
SHKBP1-213ENST00000597325 POM121L12Q8N7R1 296 aa8.5□□□□□ -1.05
SHKBP1-213ENST00000597325 MRAP2Q96G30 205 aa8.5□□□□□ -1.05
SHKBP1-213ENST00000597325 MRPL18Q9H0U6 180 aaKnown RBP8.5□□□□□ -1.05
SHKBP1-213ENST00000597325 KIF25-AS1Q9Y6Z4 181 aa8.5□□□□□ -1.05
SHKBP1-213ENST00000597325 NUPR2A6NF83 97 aa8.49□□□□□ -1.05
SHKBP1-213ENST00000597325 F5H768 121 aa8.49□□□□□ -1.05
SHKBP1-213ENST00000597325 RAB4AP20338 218 aa8.49□□□□□ -1.05
SHKBP1-213ENST00000597325 FABP9Q0Z7S8 132 aa8.49□□□□□ -1.05
SHKBP1-213ENST00000597325 MRPL51Q4U2R6 128 aaKnown RBP8.49□□□□□ -1.05
SHKBP1-213ENST00000597325 Q6ZTC4 211 aa8.49□□□□□ -1.05
SHKBP1-213ENST00000597325 TRAV26-2A0A0B4J265 109 aa8.48□□□□□ -1.05
SHKBP1-213ENST00000597325 PPBPP02775 128 aa8.48□□□□□ -1.05
SHKBP1-213ENST00000597325 CKS2P33552 79 aa8.48□□□□□ -1.05
SHKBP1-213ENST00000597325 SLAQ13239 276 aa8.48□□□□□ -1.05
SHKBP1-213ENST00000597325 SUMO4Q6EEV6 95 aa8.48□□□□□ -1.05
SHKBP1-213ENST00000597325 RNF185Q96GF1 192 aa8.48□□□□□ -1.05
SHKBP1-213ENST00000597325 MYCBP2O75592 4640 aa8.47□□□□□ -1.05
SHKBP1-213ENST00000597325 TRAV10A0A0B4J240 114 aa8.47□□□□□ -1.05
SHKBP1-213ENST00000597325 K7EQD1 137 aa8.47□□□□□ -1.05
SHKBP1-213ENST00000597325 NCR2O95944 276 aa8.47□□□□□ -1.05
SHKBP1-213ENST00000597325 GATA1P15976 413 aaPredicted RBP8.47□□□□□ -1.05
SHKBP1-213ENST00000597325 LINC00315P59091 139 aa8.47□□□□□ -1.05
SHKBP1-213ENST00000597325 FHL2Q14192 279 aa8.47□□□□□ -1.05
SHKBP1-213ENST00000597325 RHOHQ15669 191 aa8.47□□□□□ -1.05
SHKBP1-213ENST00000597325 CEMP1Q6PRD7 247 aaPredicted RBP8.47□□□□□ -1.05
SHKBP1-213ENST00000597325 LINC00336Q6ZUF6 198 aa8.47□□□□□ -1.05
SHKBP1-213ENST00000597325 ORMDL3Q8N138 153 aa8.47□□□□□ -1.05
SHKBP1-213ENST00000597325 PRADC1Q9BSG0 188 aa8.47□□□□□ -1.05
SHKBP1-213ENST00000597325 DEFB131BA0A096LNP1 70 aa8.46□□□□□ -1.06
SHKBP1-213ENST00000597325 TRBV6-4A0A1B0GX49 114 aa8.46□□□□□ -1.06
SHKBP1-213ENST00000597325 D6R8Y8 96 aa8.46□□□□□ -1.06
SHKBP1-213ENST00000597325 PPP1R17O96001 155 aa8.46□□□□□ -1.06
SHKBP1-213ENST00000597325 HOXA5P20719 270 aa8.46□□□□□ -1.06
SHKBP1-213ENST00000597325 KIAA1644Q3SXP7 199 aa8.46□□□□□ -1.06
SHKBP1-213ENST00000597325 OR10J3Q5JRS4 329 aa8.46□□□□□ -1.06
SHKBP1-213ENST00000597325 PRO0255Q9UI72 69 aa8.46□□□□□ -1.06
SHKBP1-213ENST00000597325 HHLA3Q9XRX5 114 aa8.46□□□□□ -1.06
SHKBP1-213ENST00000597325 TRBV10-1A0A0K0K1A3 114 aa8.45□□□□□ -1.06
SHKBP1-213ENST00000597325 SMKR1H3BMG3 65 aa8.45□□□□□ -1.06
SHKBP1-213ENST00000597325 M0QY20 66 aa8.45□□□□□ -1.06
SHKBP1-213ENST00000597325 PAX4O43316 350 aa8.45□□□□□ -1.06
SHKBP1-213ENST00000597325 TRGC2P03986 189 aa8.45□□□□□ -1.06
SHKBP1-213ENST00000597325 SLC25A29Q8N8R3 303 aa8.45□□□□□ -1.06
SHKBP1-213ENST00000597325 PRELID3AQ96N28 172 aa8.45□□□□□ -1.06
SHKBP1-213ENST00000597325 DNAH5Q8TE73 4624 aa8.44□□□□□ -1.06
SHKBP1-213ENST00000597325 SRIP30626 198 aa8.44□□□□□ -1.06
SHKBP1-213ENST00000597325 CRYBA4P53673 196 aa8.44□□□□□ -1.06
SHKBP1-213ENST00000597325 RPL36AP83881 106 aaKnown RBP8.44□□□□□ -1.06
SHKBP1-213ENST00000597325 Q6ZSN1 163 aa8.44□□□□□ -1.06
SHKBP1-213ENST00000597325 RPL36ALQ969Q0 106 aaKnown RBP8.44□□□□□ -1.06
SHKBP1-213ENST00000597325 NIT2Q9NQR4 276 aa8.44□□□□□ -1.06
SHKBP1-213ENST00000597325 LAMTOR2Q9Y2Q5 125 aa8.44□□□□□ -1.06
SHKBP1-213ENST00000597325 TNFRSF18Q9Y5U5 241 aa8.44□□□□□ -1.06
SHKBP1-213ENST00000597325 NACAE9PAV3 2078 aa8.43□□□□□ -1.06
SHKBP1-213ENST00000597325 TRAV26-1A0A087WT03 109 aa8.43□□□□□ -1.06
SHKBP1-213ENST00000597325 A0A0J9YY99 117 aa8.43□□□□□ -1.06
SHKBP1-213ENST00000597325 RPL39LQ96EH5 51 aaKnown RBP8.43□□□□□ -1.06
SHKBP1-213ENST00000597325 DNAJC30Q96LL9 226 aa8.43□□□□□ -1.06
SHKBP1-213ENST00000597325 ST20Q9HBF5 79 aa8.43□□□□□ -1.06
SHKBP1-213ENST00000597325 SRRM2Q9UQ35 2752 aaKnown RBP8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 GAGE12JA6NER3 117 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 C1orf196B1AJZ1 125 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 PHOX2AO14813 284 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 TNFRSF6BO95407 300 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 NPYP01303 97 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 P0DMU3 169 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 FAM231AP0DMU4 169 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 FAM231CP0DMU5 169 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 GYPEP15421 78 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 GAGE1Q13065 139 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 GAGE4Q13068 117 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 GAGE5Q13069 117 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 GAGE13Q4V321 117 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 NRACQ8N912 160 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 PHLDA1Q8WV24 401 aaPredicted RBP8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 ALKBH7Q9BT30 221 aaPredicted RBP8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 MAP1LC3AQ9H492 121 aa8.42□□□□□ -1.06
SHKBP1-213ENST00000597325 H3BNG1 76 aa8.41□□□□□ -1.06
SHKBP1-213ENST00000597325 GAS8-AS1O95177 125 aa8.41□□□□□ -1.06
SHKBP1-213ENST00000597325 NEXN-AS1Q8NBZ9 246 aa8.41□□□□□ -1.06
SHKBP1-213ENST00000597325 ZNRF2Q8NHG8 242 aa8.41□□□□□ -1.06
SHKBP1-213ENST00000597325 C20orf78Q9BR46 151 aa8.41□□□□□ -1.06
SHKBP1-213ENST00000597325 KLK5Q9Y337 293 aaPredicted RBP8.41□□□□□ -1.06
SHKBP1-213ENST00000597325 ICOSQ9Y6W8 199 aa8.41□□□□□ -1.06
SHKBP1-213ENST00000597325 TRBV7-3A0A075B6L6 115 aa8.4□□□□□ -1.06
SHKBP1-213ENST00000597325 TRBV6-5A0A0K0K1A5 114 aa8.4□□□□□ -1.06
SHKBP1-213ENST00000597325 LOC100131303A0A0U1RQF7 123 aa8.4□□□□□ -1.06
SHKBP1-213ENST00000597325 PMCHP20382 165 aa8.4□□□□□ -1.06
SHKBP1-213ENST00000597325 SUMO2P61956 95 aaKnown RBP8.4□□□□□ -1.06
SHKBP1-213ENST00000597325 VSIG2Q96IQ7 327 aa8.4□□□□□ -1.06
SHKBP1-213ENST00000597325 SDHAF1A6NFY7 115 aa8.39□□□□□ -1.07
SHKBP1-213ENST00000597325 RAB5BP61020 215 aa8.39□□□□□ -1.07
SHKBP1-213ENST00000597325 MRPL23Q16540 153 aaKnown RBP8.39□□□□□ -1.07
SHKBP1-213ENST00000597325 SH2D6Q7Z4S9 175 aa8.39□□□□□ -1.07
SHKBP1-213ENST00000597325 MAPKAPK5-AS1Q8N8E1 139 aa8.39□□□□□ -1.07
SHKBP1-213ENST00000597325 C15orf53Q8NAA6 179 aa8.39□□□□□ -1.07
SHKBP1-213ENST00000597325 LOC389332A0A1B0GUA5 103 aa8.38□□□□□ -1.07
SHKBP1-213ENST00000597325 IGLL5B9A064 214 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms