RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 TIRAPP58753 221 aa6.16□□□□□ -1.42
SNRPA-202ENST00000596860 NANOS2P60321 138 aaKnown RBP6.16□□□□□ -1.42
SNRPA-202ENST00000596860 RPL36AP83881 106 aaKnown RBP6.16□□□□□ -1.42
SNRPA-202ENST00000596860 TMEM97Q5BJF2 176 aa6.16□□□□□ -1.42
SNRPA-202ENST00000596860 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.16□□□□□ -1.42
SNRPA-202ENST00000596860 C15orf53Q8NAA6 179 aa6.16□□□□□ -1.42
SNRPA-202ENST00000596860 RPL36ALQ969Q0 106 aaKnown RBP6.16□□□□□ -1.42
SNRPA-202ENST00000596860 PRELID3AQ96N28 172 aa6.16□□□□□ -1.42
SNRPA-202ENST00000596860 ALKBH7Q9BT30 221 aaPredicted RBP6.16□□□□□ -1.42
SNRPA-202ENST00000596860 TRBV27A0A0K0K1C4 114 aa6.15□□□□□ -1.42
SNRPA-202ENST00000596860 NUPR2A6NF83 97 aa6.15□□□□□ -1.42
SNRPA-202ENST00000596860 F5H768 121 aa6.15□□□□□ -1.42
SNRPA-202ENST00000596860 PAX4O43316 350 aa6.15□□□□□ -1.42
SNRPA-202ENST00000596860 TNFRSF6BO95407 300 aa6.15□□□□□ -1.42
SNRPA-202ENST00000596860 TRGC2P03986 189 aa6.15□□□□□ -1.42
SNRPA-202ENST00000596860 POLR2KP53803 58 aaKnown RBP6.15□□□□□ -1.42
SNRPA-202ENST00000596860 SUMO2P61956 95 aaKnown RBP6.15□□□□□ -1.42
SNRPA-202ENST00000596860 Q0VG73 95 aa6.15□□□□□ -1.42
SNRPA-202ENST00000596860 OR10J3Q5JRS4 329 aa6.15□□□□□ -1.42
SNRPA-202ENST00000596860 DAZ4Q86SG3 579 aaKnown RBP6.15□□□□□ -1.42
SNRPA-202ENST00000596860 NEXN-AS1Q8NBZ9 246 aa6.15□□□□□ -1.42
SNRPA-202ENST00000596860 ST20Q9HBF5 79 aa6.15□□□□□ -1.42
SNRPA-202ENST00000596860 DAZ3Q9NR90 486 aaKnown RBP6.15□□□□□ -1.42
SNRPA-202ENST00000596860 TNFRSF18Q9Y5U5 241 aa6.15□□□□□ -1.42
SNRPA-202ENST00000596860 DYNC2H1Q8NCM8 4307 aaKnown RBP6.15□□□□□ -1.43
SNRPA-202ENST00000596860 IGHV3-73A0A0B4J1V6 119 aa6.14□□□□□ -1.43
SNRPA-202ENST00000596860 C1orf196B1AJZ1 125 aa6.14□□□□□ -1.43
SNRPA-202ENST00000596860 NCR2O95944 276 aa6.14□□□□□ -1.43
SNRPA-202ENST00000596860 UBE2D3P61077 147 aa6.14□□□□□ -1.43
SNRPA-202ENST00000596860 UBE2D2P62837 147 aa6.14□□□□□ -1.43
SNRPA-202ENST00000596860 MRPL23Q16540 153 aaKnown RBP6.14□□□□□ -1.43
SNRPA-202ENST00000596860 Q6ZSN1 163 aa6.14□□□□□ -1.43
SNRPA-202ENST00000596860 PHLDA1Q8WV24 401 aaPredicted RBP6.14□□□□□ -1.43
SNRPA-202ENST00000596860 VSIG2Q96IQ7 327 aa6.14□□□□□ -1.43
SNRPA-202ENST00000596860 WWC2-AS2Q96NR7 200 aa6.14□□□□□ -1.43
SNRPA-202ENST00000596860 MAP1LC3AQ9H492 121 aa6.14□□□□□ -1.43
SNRPA-202ENST00000596860 NXT2Q9NPJ8 142 aaKnown RBP6.14□□□□□ -1.43
SNRPA-202ENST00000596860 TRAV26-2A0A0B4J265 109 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 SDHAF1A6NFY7 115 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 LINC01546A6NGU7 62 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 LINC01549A6NIU2 74 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 VCYO14598 125 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 NPYP01303 97 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 PMCHP20382 165 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 SRIP30626 198 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 RAB5BP61020 215 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 TMEM70Q9BUB7 260 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 SMIM2Q9BVW6 85 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 GTSF1LQ9H1H1 148 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 KLK5Q9Y337 293 aaPredicted RBP6.13□□□□□ -1.43
SNRPA-202ENST00000596860 ICOSQ9Y6W8 199 aa6.13□□□□□ -1.43
SNRPA-202ENST00000596860 IGLV2-18A0A075B6J9 118 aa6.12□□□□□ -1.43
SNRPA-202ENST00000596860 I3L3M4 83 aa6.12□□□□□ -1.43
SNRPA-202ENST00000596860 GYPEP15421 78 aa6.12□□□□□ -1.43
SNRPA-202ENST00000596860 G0S2P27469 103 aa6.12□□□□□ -1.43
SNRPA-202ENST00000596860 KIAA1644Q3SXP7 199 aa6.12□□□□□ -1.43
SNRPA-202ENST00000596860 COA6Q5JTJ3 125 aaKnown RBP6.12□□□□□ -1.43
SNRPA-202ENST00000596860 CEMP1Q6PRD7 247 aaPredicted RBP6.12□□□□□ -1.43
SNRPA-202ENST00000596860 Q8N8P6 123 aa6.12□□□□□ -1.43
SNRPA-202ENST00000596860 C18orf32Q8TCD1 76 aa6.12□□□□□ -1.43
SNRPA-202ENST00000596860 RPL39LQ96EH5 51 aaKnown RBP6.12□□□□□ -1.43
SNRPA-202ENST00000596860 KIR2DL4Q99706 377 aa6.12□□□□□ -1.43
SNRPA-202ENST00000596860 A0A096LPF7 62 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 SMKR1H3BMG3 65 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 HIST1H2BKO60814 126 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 HIST1H2BJP06899 126 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 HTN3P15516 51 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 HIST1H2BOP23527 126 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 HIST1H2BBP33778 126 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 HIST1H2BDP58876 126 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 HIST1H2BCP62807 126 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 HIST2H2BEQ16778 126 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.11□□□□□ -1.43
SNRPA-202ENST00000596860 NEGR1Q7Z3B1 354 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 ATP6V0E2Q8NHE4 81 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 ZNRF2Q8NHG8 242 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 HIST1H2BHQ93079 126 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 CHCHD1Q96BP2 118 aaKnown RBP6.11□□□□□ -1.43
SNRPA-202ENST00000596860 HIST1H2BNQ99877 126 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 HIST1H2BMQ99879 126 aa6.11□□□□□ -1.43
SNRPA-202ENST00000596860 GAGE12JA6NER3 117 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 C3orf84H3BNL1 204 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 H7C423 109 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 GAS8-AS1O95177 125 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 P0DMU3 169 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 FAM231AP0DMU4 169 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 FAM231CP0DMU5 169 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 ESDP10768 282 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 PKIAP61925 76 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 SMAGPQ0VAQ4 97 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 GAGE1Q13065 139 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 GAGE4Q13068 117 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 GAGE5Q13069 117 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 COTL1Q14019 142 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 GAGE13Q4V321 117 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 ORMDL2Q53FV1 153 aa6.1□□□□□ -1.43
SNRPA-202ENST00000596860 LINC00614P0C842 121 aa6.09□□□□□ -1.43
SNRPA-202ENST00000596860 IQCJQ1A5X6 159 aa6.09□□□□□ -1.43
SNRPA-202ENST00000596860 PRSS3P2Q8NHM4 247 aa6.09□□□□□ -1.43
SNRPA-202ENST00000596860 MUC7Q8TAX7 377 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms