RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ZNF664Q8N3J9 261 aa9.15□□□□□ -0.94
SCAF1-202ENST00000595242 MRAP2Q96G30 205 aa9.15□□□□□ -0.94
SCAF1-202ENST00000595242 C9orf85Q96MD7 179 aa9.15□□□□□ -0.94
SCAF1-202ENST00000595242 IGLV2-18A0A075B6J9 118 aa9.14□□□□□ -0.95
SCAF1-202ENST00000595242 TRAV12-3A0A0B4J271 114 aa9.14□□□□□ -0.95
SCAF1-202ENST00000595242 GNRH2O43555 120 aa9.14□□□□□ -0.95
SCAF1-202ENST00000595242 BTF3P20290 206 aaKnown RBP9.14□□□□□ -0.95
SCAF1-202ENST00000595242 ZNF124Q15973 351 aa9.14□□□□□ -0.95
SCAF1-202ENST00000595242 PRSS3P2Q8NHM4 247 aa9.14□□□□□ -0.95
SCAF1-202ENST00000595242 MAP1LC3AQ9H492 121 aa9.14□□□□□ -0.95
SCAF1-202ENST00000595242 DPH3P1Q9H4G8 78 aa9.14□□□□□ -0.95
SCAF1-202ENST00000595242 PHLDA3Q9Y5J5 127 aa9.14□□□□□ -0.95
SCAF1-202ENST00000595242 IGHV1OR15-1A0A075B7D0 117 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 A0A096LNJ9 63 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 IGHV3-16A0A0C4DH30 117 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 LINC00587B1AMM8 73 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 SMKR1H3BMG3 65 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 M0R381 172 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 LEPROTL1O95214 131 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 TNFRSF6BO95407 300 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 NCR2O95944 276 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 IFI27P40305 119 aaPredicted RBP9.13□□□□□ -0.95
SCAF1-202ENST00000595242 SSTP61278 116 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 RBMY1FQ15415 496 aaKnown RBP9.13□□□□□ -0.95
SCAF1-202ENST00000595242 SPINK13Q1W4C9 94 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 NRACQ8N912 160 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 AP1S3Q96PC3 154 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 C20orf144Q9BQM9 153 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 LINC00467Q9BRT7 94 aa9.13□□□□□ -0.95
SCAF1-202ENST00000595242 NXT2Q9NPJ8 142 aaKnown RBP9.13□□□□□ -0.95
SCAF1-202ENST00000595242 TRGV11A0A075B6L2 103 aa9.12□□□□□ -0.95
SCAF1-202ENST00000595242 KNCNA6PVL3 124 aa9.12□□□□□ -0.95
SCAF1-202ENST00000595242 PMCHL1Q16048 86 aa9.12□□□□□ -0.95
SCAF1-202ENST00000595242 C1orf134Q5TEV5 83 aa9.12□□□□□ -0.95
SCAF1-202ENST00000595242 Q8NAQ8 132 aa9.12□□□□□ -0.95
SCAF1-202ENST00000595242 TMEM70Q9BUB7 260 aa9.12□□□□□ -0.95
SCAF1-202ENST00000595242 HSPB8Q9UJY1 196 aa9.12□□□□□ -0.95
SCAF1-202ENST00000595242 KIF25-AS1Q9Y6Z4 181 aa9.12□□□□□ -0.95
SCAF1-202ENST00000595242 IGKV3-20P01619 116 aa9.11□□□□□ -0.95
SCAF1-202ENST00000595242 RBMY1A1P0DJD3 496 aaKnown RBP9.11□□□□□ -0.95
SCAF1-202ENST00000595242 RBMY1CP0DJD4 496 aa9.11□□□□□ -0.95
SCAF1-202ENST00000595242 CMC4P56277 68 aaPredicted RBP9.11□□□□□ -0.95
SCAF1-202ENST00000595242 SPATA12Q7Z6I5 190 aa9.11□□□□□ -0.95
SCAF1-202ENST00000595242 Q8N8P6 123 aa9.11□□□□□ -0.95
SCAF1-202ENST00000595242 NDUFAF3Q9BU61 184 aa9.11□□□□□ -0.95
SCAF1-202ENST00000595242 DNAH5Q8TE73 4624 aa9.11□□□□□ -0.95
SCAF1-202ENST00000595242 TRAV12-2A0A075B6T6 113 aa9.1□□□□□ -0.95
SCAF1-202ENST00000595242 SYS1-DBNDD2H3BUS1 97 aa9.1□□□□□ -0.95
SCAF1-202ENST00000595242 GAS8-AS1O95177 125 aa9.1□□□□□ -0.95
SCAF1-202ENST00000595242 HBDP02042 147 aa9.1□□□□□ -0.95
SCAF1-202ENST00000595242 LINC00315P59091 139 aa9.1□□□□□ -0.95
SCAF1-202ENST00000595242 PET117Q6UWS5 81 aa9.1□□□□□ -0.95
SCAF1-202ENST00000595242 SRRM2Q9UQ35 2752 aaKnown RBP9.1□□□□□ -0.95
SCAF1-202ENST00000595242 DEFB131BA0A096LNP1 70 aa9.09□□□□□ -0.95
SCAF1-202ENST00000595242 LOC389332A0A1B0GUA5 103 aa9.09□□□□□ -0.95
SCAF1-202ENST00000595242 DDTP30046 118 aa9.09□□□□□ -0.95
SCAF1-202ENST00000595242 TNP2Q05952 138 aa9.09□□□□□ -0.95
SCAF1-202ENST00000595242 LINC00173Q6ZV60 143 aa9.09□□□□□ -0.95
SCAF1-202ENST00000595242 UBE2DNLQ8IWF7 75 aa9.09□□□□□ -0.95
SCAF1-202ENST00000595242 PTH2Q96A98 100 aa9.09□□□□□ -0.95
SCAF1-202ENST00000595242 C20orf78Q9BR46 151 aa9.09□□□□□ -0.95
SCAF1-202ENST00000595242 VAMP8Q9BV40 100 aa9.09□□□□□ -0.95
SCAF1-202ENST00000595242 PRO1933Q9H354 126 aa9.09□□□□□ -0.95
SCAF1-202ENST00000595242 TIMM8BQ9Y5J9 83 aaPredicted RBP9.09□□□□□ -0.95
SCAF1-202ENST00000595242 IGHV4-28A0A0C4DH34 117 aa9.08□□□□□ -0.96
SCAF1-202ENST00000595242 K7EMI3 77 aa9.08□□□□□ -0.96
SCAF1-202ENST00000595242 PPP1R17O96001 155 aa9.08□□□□□ -0.96
SCAF1-202ENST00000595242 GATA1P15976 413 aaPredicted RBP9.08□□□□□ -0.96
SCAF1-202ENST00000595242 RPL32P62910 135 aaKnown RBP9.08□□□□□ -0.96
SCAF1-202ENST00000595242 PIK3CD-AS1Q5SR53 167 aa9.08□□□□□ -0.96
SCAF1-202ENST00000595242 TRPT1Q86TN4 253 aaKnown RBP9.08□□□□□ -0.96
SCAF1-202ENST00000595242 SYT8Q8NBV8 401 aa9.08□□□□□ -0.96
SCAF1-202ENST00000595242 MAP1LC3CQ9BXW4 147 aa9.08□□□□□ -0.96
SCAF1-202ENST00000595242 C20orf202A1L168 122 aa9.07□□□□□ -0.96
SCAF1-202ENST00000595242 FCER1GP30273 86 aa9.07□□□□□ -0.96
SCAF1-202ENST00000595242 LINC01545Q5VT33 79 aa9.07□□□□□ -0.96
SCAF1-202ENST00000595242 C14orf178Q8N769 122 aaPredicted RBP9.07□□□□□ -0.96
SCAF1-202ENST00000595242 RASL10AQ92737 203 aa9.07□□□□□ -0.96
SCAF1-202ENST00000595242 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
SCAF1-202ENST00000595242 MDFICQ9P1T7 246 aa9.07□□□□□ -0.96
SCAF1-202ENST00000595242 TRAV26-2A0A0B4J265 109 aa9.06□□□□□ -0.96
SCAF1-202ENST00000595242 EPM2AB3EWF7 344 aa9.06□□□□□ -0.96
SCAF1-202ENST00000595242 INSP01308 110 aa9.06□□□□□ -0.96
SCAF1-202ENST00000595242 INAFM2P0DMQ5 153 aa9.06□□□□□ -0.96
SCAF1-202ENST00000595242 MIFP14174 115 aa9.06□□□□□ -0.96
SCAF1-202ENST00000595242 MYCBP2O75592 4640 aa9.05□□□□□ -0.96
SCAF1-202ENST00000595242 SUMO2P61956 95 aaKnown RBP9.05□□□□□ -0.96
SCAF1-202ENST00000595242 C12orf74Q32Q52 190 aa9.05□□□□□ -0.96
SCAF1-202ENST00000595242 FLG2Q5D862 2391 aaPredicted RBP9.04□□□□□ -0.96
SCAF1-202ENST00000595242 TRAV9-2A0A087WT02 112 aa9.04□□□□□ -0.96
SCAF1-202ENST00000595242 TRBV6-5A0A0K0K1A5 114 aa9.04□□□□□ -0.96
SCAF1-202ENST00000595242 MGPP08493 103 aa9.04□□□□□ -0.96
SCAF1-202ENST00000595242 SMIM17P0DL12 118 aa9.04□□□□□ -0.96
SCAF1-202ENST00000595242 FXYD7P58549 80 aa9.04□□□□□ -0.96
SCAF1-202ENST00000595242 ZNF415Q09FC8 603 aa9.04□□□□□ -0.96
SCAF1-202ENST00000595242 CELA1Q9UNI1 258 aa9.04□□□□□ -0.96
SCAF1-202ENST00000595242 PAM16Q9Y3D7 125 aa9.04□□□□□ -0.96
SCAF1-202ENST00000595242 CBY3A6NI87 242 aa9.03□□□□□ -0.96
SCAF1-202ENST00000595242 CRYGDP07320 174 aa9.03□□□□□ -0.96
SCAF1-202ENST00000595242 LAGE3Q14657 143 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms