RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 AP5S1Q9NUS5 200 aa14.83□□□□□ -0.03
PNKP-203ENST00000593946 LINC01546A6NGU7 62 aa14.82□□□□□ -0.04
PNKP-203ENST00000593946 Q6ZSN1 163 aa14.82□□□□□ -0.04
PNKP-203ENST00000593946 FAM19A2Q8N3H0 131 aa14.82□□□□□ -0.04
PNKP-203ENST00000593946 ZNF479Q96JC4 524 aa14.82□□□□□ -0.04
PNKP-203ENST00000593946 PACRGQ96M98 296 aaPredicted RBP14.82□□□□□ -0.04
PNKP-203ENST00000593946 TRGV2A0A075B6R0 118 aa14.81□□□□□ -0.04
PNKP-203ENST00000593946 TRBV6-5A0A0K0K1A5 114 aa14.81□□□□□ -0.04
PNKP-203ENST00000593946 H7C1H1 209 aa14.81□□□□□ -0.04
PNKP-203ENST00000593946 IGHV3-53P01767 116 aa14.81□□□□□ -0.04
PNKP-203ENST00000593946 PMCHP20382 165 aa14.81□□□□□ -0.04
PNKP-203ENST00000593946 AMTP48728 403 aa14.81□□□□□ -0.04
PNKP-203ENST00000593946 Q8N8P6 123 aa14.81□□□□□ -0.04
PNKP-203ENST00000593946 SMIM2Q9BVW6 85 aa14.81□□□□□ -0.04
PNKP-203ENST00000593946 NIT2Q9NQR4 276 aa14.8□□□□□ -0.04
PNKP-203ENST00000593946 LYRM9A8MSI8 78 aa14.8□□□□□ -0.04
PNKP-203ENST00000593946 RPL32P62910 135 aaKnown RBP14.8□□□□□ -0.04
PNKP-203ENST00000593946 C18orf15Q96N68 181 aa14.8□□□□□ -0.04
PNKP-203ENST00000593946 ST20Q9HBF5 79 aa14.8□□□□□ -0.04
PNKP-203ENST00000593946 IGHV1-24A0A0C4DH33 117 aa14.79□□□□□ -0.04
PNKP-203ENST00000593946 DEFB4AO15263 64 aa14.79□□□□□ -0.04
PNKP-203ENST00000593946 FAM222AQ5U5X8 452 aa14.79□□□□□ -0.04
PNKP-203ENST00000593946 RETNQ9HD89 108 aa14.79□□□□□ -0.04
PNKP-203ENST00000593946 CIDEAO60543 219 aa14.78□□□□□ -0.04
PNKP-203ENST00000593946 POLR2KP53803 58 aaKnown RBP14.78□□□□□ -0.04
PNKP-203ENST00000593946 PMCHL1Q16048 86 aa14.78□□□□□ -0.04
PNKP-203ENST00000593946 DKK2Q9UBU2 259 aa14.78□□□□□ -0.04
PNKP-203ENST00000593946 OR10D4PQ8NGN7 298 aa14.78□□□□□ -0.04
PNKP-203ENST00000593946 TMEM70Q9BUB7 260 aa14.78□□□□□ -0.04
PNKP-203ENST00000593946 TENM3Q9P273 2699 aa14.77□□□□□ -0.05
PNKP-203ENST00000593946 P0DMU3 169 aa14.77□□□□□ -0.05
PNKP-203ENST00000593946 FAM231AP0DMU4 169 aa14.77□□□□□ -0.05
PNKP-203ENST00000593946 FAM231CP0DMU5 169 aa14.77□□□□□ -0.05
PNKP-203ENST00000593946 DEFB130BP0DP73 79 aa14.77□□□□□ -0.05
PNKP-203ENST00000593946 DEFB130AP0DP74 79 aa14.77□□□□□ -0.05
PNKP-203ENST00000593946 SDHAF1A6NFY7 115 aa14.76□□□□□ -0.05
PNKP-203ENST00000593946 SBSPONQ8IVN8 264 aa14.75□□□□□ -0.05
PNKP-203ENST00000593946 A0A096LNJ9 63 aa14.75□□□□□ -0.05
PNKP-203ENST00000593946 TRBV27A0A0K0K1C4 114 aa14.75□□□□□ -0.05
PNKP-203ENST00000593946 Q9UF83 564 aa14.75□□□□□ -0.05
PNKP-203ENST00000593946 NEXN-AS1Q8NBZ9 246 aa14.74□□□□□ -0.05
PNKP-203ENST00000593946 CELA1Q9UNI1 258 aa14.74□□□□□ -0.05
PNKP-203ENST00000593946 K7EMI3 77 aa14.73□□□□□ -0.05
PNKP-203ENST00000593946 VCYO14598 125 aa14.73□□□□□ -0.05
PNKP-203ENST00000593946 TCAPO15273 167 aa14.73□□□□□ -0.05
PNKP-203ENST00000593946 K7EQD1 137 aa14.72□□□□□ -0.05
PNKP-203ENST00000593946 FHL2Q14192 279 aa14.72□□□□□ -0.05
PNKP-203ENST00000593946 LAGE3Q14657 143 aa14.72□□□□□ -0.05
PNKP-203ENST00000593946 DEFB121Q5J5C9 76 aa14.72□□□□□ -0.05
PNKP-203ENST00000593946 NEGR1Q7Z3B1 354 aa14.72□□□□□ -0.05
PNKP-203ENST00000593946 SLC25A29Q8N8R3 303 aa14.72□□□□□ -0.05
PNKP-203ENST00000593946 DNAJC30Q96LL9 226 aa14.72□□□□□ -0.05
PNKP-203ENST00000593946 SPART-AS1P0CW21 52 aa14.72□□□□□ -0.05
PNKP-203ENST00000593946 TNFRSF18Q9Y5U5 241 aa14.72□□□□□ -0.05
PNKP-203ENST00000593946 TRGV4A0A0C4DH28 118 aa14.71□□□□□ -0.05
PNKP-203ENST00000593946 TRBV10-1A0A0K0K1A3 114 aa14.71□□□□□ -0.05
PNKP-203ENST00000593946 HBDP02042 147 aa14.71□□□□□ -0.05
PNKP-203ENST00000593946 TRBV6-4A0A1B0GX49 114 aa14.7□□□□□ -0.06
PNKP-203ENST00000593946 FCER1GP30273 86 aa14.7□□□□□ -0.06
PNKP-203ENST00000593946 TM2D3Q9BRN9 247 aa14.7□□□□□ -0.06
PNKP-203ENST00000593946 C11orf68Q9H3H3 251 aaKnown RBP14.7□□□□□ -0.06
PNKP-203ENST00000593946 DNHD1Q96M86 4753 aa14.7□□□□□ -0.06
PNKP-203ENST00000593946 LEPROTL1O95214 131 aa14.69□□□□□ -0.06
PNKP-203ENST00000593946 DAD1P61803 113 aa14.69□□□□□ -0.06
PNKP-203ENST00000593946 ORMDL2Q53FV1 153 aa14.69□□□□□ -0.06
PNKP-203ENST00000593946 KIR2DL4Q99706 377 aa14.69□□□□□ -0.06
PNKP-203ENST00000593946 TEX48A0A1B0GUV7 120 aa14.69□□□□□ -0.06
PNKP-203ENST00000593946 SPATA25Q9BR10 227 aa14.69□□□□□ -0.06
PNKP-203ENST00000593946 I3L3M4 83 aa14.68□□□□□ -0.06
PNKP-203ENST00000593946 TRBV7-3A0A075B6L6 115 aa14.67□□□□□ -0.06
PNKP-203ENST00000593946 LINC00173Q6ZV60 143 aa14.67□□□□□ -0.06
PNKP-203ENST00000593946 RHOHQ15669 191 aa14.66□□□□□ -0.06
PNKP-203ENST00000593946 MRAPQ8TCY5 172 aa14.66□□□□□ -0.06
PNKP-203ENST00000593946 NUDT3O95989 172 aa14.66□□□□□ -0.06
PNKP-203ENST00000593946 TSHBP01222 138 aa14.66□□□□□ -0.06
PNKP-203ENST00000593946 RPL36AP83881 106 aaKnown RBP14.66□□□□□ -0.06
PNKP-203ENST00000593946 PYY3Q5JQD4 70 aa14.66□□□□□ -0.06
PNKP-203ENST00000593946 ZNRF2Q8NHG8 242 aa14.66□□□□□ -0.06
PNKP-203ENST00000593946 RPL36ALQ969Q0 106 aaKnown RBP14.66□□□□□ -0.06
PNKP-203ENST00000593946 HSPB8Q9UJY1 196 aa14.66□□□□□ -0.06
PNKP-203ENST00000593946 C3orf79P0CE67 100 aa14.65□□□□□ -0.06
PNKP-203ENST00000593946 BTF3P20290 206 aaKnown RBP14.65□□□□□ -0.06
PNKP-203ENST00000593946 DEFB104AQ8WTQ1 72 aa14.65□□□□□ -0.06
PNKP-203ENST00000593946 HHLA3Q9XRX5 114 aa14.65□□□□□ -0.06
PNKP-203ENST00000593946 ATP5G1P05496 136 aa14.63□□□□□ -0.07
PNKP-203ENST00000593946 KRTDAPP60985 99 aa14.63□□□□□ -0.07
PNKP-203ENST00000593946 JOSD1Q15040 202 aaPredicted RBP14.63□□□□□ -0.07
PNKP-203ENST00000593946 PRADC1Q9BSG0 188 aa14.63□□□□□ -0.07
PNKP-203ENST00000593946 CRYBA4P53673 196 aa14.63□□□□□ -0.07
PNKP-203ENST00000593946 UBE2D3P61077 147 aa14.63□□□□□ -0.07
PNKP-203ENST00000593946 UBE2D2P62837 147 aa14.63□□□□□ -0.07
PNKP-203ENST00000593946 PRO0255Q9UI72 69 aa14.63□□□□□ -0.07
PNKP-203ENST00000593946 A0A0J9YWU9 116 aa14.62□□□□□ -0.07
PNKP-203ENST00000593946 LOC100131303A0A0U1RQF7 123 aa14.62□□□□□ -0.07
PNKP-203ENST00000593946 GAGE12JA6NER3 117 aa14.62□□□□□ -0.07
PNKP-203ENST00000593946 LINC00587B1AMM8 73 aa14.62□□□□□ -0.07
PNKP-203ENST00000593946 GAGE1Q13065 139 aa14.62□□□□□ -0.07
PNKP-203ENST00000593946 GAGE4Q13068 117 aa14.62□□□□□ -0.07
PNKP-203ENST00000593946 GAGE5Q13069 117 aa14.62□□□□□ -0.07
PNKP-203ENST00000593946 C12orf74Q32Q52 190 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms