RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 ARL14EPLP0DKL9 152 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 ESDP10768 282 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 FCGR1AP12314 374 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 AKR1C4P17516 323 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 NTF3P20783 257 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 MYL9P24844 172 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 CTRLP40313 264 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 DEFA3P59666 94 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 RPS20P60866 119 aaKnown RBP1.46□□□□□ -2.18
VRK3-204ENST00000593912 PRLHP81277 87 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 SPAG11BQ08648 103 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 LINC01559Q495D7 138 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 GOLT1AQ6ZVE7 132 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 OR11H4Q8NGC9 324 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 OR51S1Q8NGJ8 323 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 HYLS1Q96M11 299 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 IMMP2LQ96T52 175 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 ZNF471Q9BX82 626 aaPredicted RBP1.46□□□□□ -2.18
VRK3-204ENST00000593912 SLC25A2Q9BXI2 301 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 IL36BQ9NZH7 164 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 TMEM14CQ9P0S9 112 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 C6orf48Q9UBA6 75 aa1.46□□□□□ -2.18
VRK3-204ENST00000593912 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
VRK3-204ENST00000593912 GRIFINA4D1Z8 144 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 NOTOA8MTQ0 251 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 MT1BP07438 61 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 ARMS2P0C7Q2 107 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 TLX1NBP0CAT3 122 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 MALP21145 153 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 FGF7P21781 194 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 RAB4BP61018 213 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 RANP62826 216 aaKnown RBP1.45□□□□□ -2.18
VRK3-204ENST00000593912 GNG5P63218 68 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 GCSAMLQ5JQS6 135 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 C22orf42Q6IC83 251 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 RNASEKQ6P5S7 137 aaKnown RBP1.45□□□□□ -2.18
VRK3-204ENST00000593912 UNQ6190/PRO20217Q6UXQ8 127 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 Q86TA4 180 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 GPX8Q8TED1 209 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 PLEKHB2Q96CS7 222 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 RTBDNQ9BSG5 229 aaPredicted RBP1.45□□□□□ -2.18
VRK3-204ENST00000593912 MARVELD1Q9BSK0 173 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 NMES1Q9C002 83 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 MRPL35Q9NZE8 188 aaKnown RBP1.45□□□□□ -2.18
VRK3-204ENST00000593912 CCDC59Q9P031 241 aaKnown RBP1.45□□□□□ -2.18
VRK3-204ENST00000593912 RABL2AQ9UBK7 228 aaPredicted RBP1.45□□□□□ -2.18
VRK3-204ENST00000593912 RABL2BQ9UNT1 228 aa1.45□□□□□ -2.18
VRK3-204ENST00000593912 STRAPQ9Y3F4 350 aaKnown RBP1.45□□□□□ -2.18
VRK3-204ENST00000593912 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.44□□□□□ -2.18
VRK3-204ENST00000593912 IGKV2-29A2NJV5 120 aaPredicted RBP1.44□□□□□ -2.18
VRK3-204ENST00000593912 GAGE10A6NGK3 116 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 SYNGR2O43760 224 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 TCRAP04437 139 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 METTL15P1P0C7V9 234 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 GABARAPL2P60520 117 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 ARL16Q0P5N6 197 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 SCGB2B2Q4G0G5 96 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 CD164L2Q6UWJ8 174 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 MIR17HGQ75NE6 70 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 C5orf38Q86SI9 138 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 LINC00469Q8N7U9 141 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 OR1L4Q8NGR5 311 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 TMED6Q8WW62 240 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 FXYD5Q96DB9 178 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 FAM167A-AS1Q96KT0 104 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 CIB3Q96Q77 187 aaPredicted RBP1.44□□□□□ -2.18
VRK3-204ENST00000593912 ACOT13Q9NPJ3 140 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 OR5AC2Q9NZP5 309 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 CACFD1Q9UGQ2 172 aa1.44□□□□□ -2.18
VRK3-204ENST00000593912 A0A0B4J2A0 478 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 FAM236DA0A1B0GTK5 79 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 PTGES3LE9PB15 166 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 COX7A2LO14548 114 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 FAM236CP0DP71 79 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 CALB2P22676 271 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 RPL12P30050 165 aaKnown RBP1.43□□□□□ -2.18
VRK3-204ENST00000593912 PRSS3P35030 304 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 CAMLGP49069 296 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 NKX2-5P52952 324 aaPredicted RBP1.43□□□□□ -2.18
VRK3-204ENST00000593912 TAS2R19P59542 299 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 RPS29P62273 56 aaKnown RBP1.43□□□□□ -2.18
VRK3-204ENST00000593912 MXD1Q05195 221 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 CTF1Q16619 201 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 LBHQ53QV2 105 aaPredicted RBP1.43□□□□□ -2.18
VRK3-204ENST00000593912 AMMECR1LQ6DCA0 310 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 FAAP20Q6NZ36 180 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 LYZL1Q6UWQ5 148 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 Q6ZRG5 221 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 NRARPQ7Z6K4 114 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 MRPL55Q7Z7F7 128 aaKnown RBP1.43□□□□□ -2.18
VRK3-204ENST00000593912 KRTAP8-1Q8IUC2 63 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 C12orf45Q8N5I9 185 aaPredicted RBP1.43□□□□□ -2.18
VRK3-204ENST00000593912 OR5C1Q8NGR4 320 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 PYDC1Q8WXC3 89 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 LINC00167Q96N53 147 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 SPRR4Q96PI1 79 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 PFDN5Q99471 154 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 SHPKQ9UHJ6 478 aa1.43□□□□□ -2.18
VRK3-204ENST00000593912 TMSB15BA0A087X1C1 80 aa1.42□□□□□ -2.18
VRK3-204ENST00000593912 MUC21A0A140T8X8 626 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms