RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 IFI27P40305 119 aaPredicted RBP12.41□□□□□ -0.42
CXXC1-212ENST00000589940 PDZD11Q5EBL8 140 aa12.41□□□□□ -0.42
CXXC1-212ENST00000589940 RNASEKQ6P5S7 137 aaKnown RBP12.41□□□□□ -0.42
CXXC1-212ENST00000589940 Q6ZSN1 163 aa12.41□□□□□ -0.42
CXXC1-212ENST00000589940 C20orf78Q9BR46 151 aa12.41□□□□□ -0.42
CXXC1-212ENST00000589940 PRSS47A8MTI9 375 aa12.4□□□□□ -0.42
CXXC1-212ENST00000589940 LINC00614P0C842 121 aa12.4□□□□□ -0.42
CXXC1-212ENST00000589940 SUMO2P61956 95 aaKnown RBP12.4□□□□□ -0.42
CXXC1-212ENST00000589940 CHCHD1Q96BP2 118 aaKnown RBP12.39□□□□□ -0.43
CXXC1-212ENST00000589940 SPATA25Q9BR10 227 aa12.39□□□□□ -0.43
CXXC1-212ENST00000589940 FA2HQ7L5A8 372 aa12.39□□□□□ -0.43
CXXC1-212ENST00000589940 MRAPQ8TCY5 172 aa12.39□□□□□ -0.43
CXXC1-212ENST00000589940 TM2D3Q9BRN9 247 aa12.39□□□□□ -0.43
CXXC1-212ENST00000589940 NIT2Q9NQR4 276 aa12.39□□□□□ -0.43
CXXC1-212ENST00000589940 TRBV6-5A0A0K0K1A5 114 aa12.38□□□□□ -0.43
CXXC1-212ENST00000589940 ST20Q9HBF5 79 aa12.38□□□□□ -0.43
CXXC1-212ENST00000589940 NXT2Q9NPJ8 142 aaKnown RBP12.38□□□□□ -0.43
CXXC1-212ENST00000589940 TENM3Q9P273 2699 aa12.38□□□□□ -0.43
CXXC1-212ENST00000589940 SPART-AS1P0CW21 52 aa12.38□□□□□ -0.43
CXXC1-212ENST00000589940 PMCHP20382 165 aa12.38□□□□□ -0.43
CXXC1-212ENST00000589940 S100A2P29034 98 aa12.38□□□□□ -0.43
CXXC1-212ENST00000589940 AP5S1Q9NUS5 200 aa12.38□□□□□ -0.43
CXXC1-212ENST00000589940 CELA1Q9UNI1 258 aa12.38□□□□□ -0.43
CXXC1-212ENST00000589940 HSBP1O75506 76 aa12.37□□□□□ -0.43
CXXC1-212ENST00000589940 Q8N8P6 123 aa12.37□□□□□ -0.43
CXXC1-212ENST00000589940 SMIM2Q9BVW6 85 aa12.37□□□□□ -0.43
CXXC1-212ENST00000589940 C11orf68Q9H3H3 251 aaKnown RBP12.37□□□□□ -0.43
CXXC1-212ENST00000589940 IGLV2-18A0A075B6J9 118 aa12.37□□□□□ -0.43
CXXC1-212ENST00000589940 IFITM10A6NMD0 228 aa12.37□□□□□ -0.43
CXXC1-212ENST00000589940 P0DMU3 169 aa12.37□□□□□ -0.43
CXXC1-212ENST00000589940 FAM231AP0DMU4 169 aa12.37□□□□□ -0.43
CXXC1-212ENST00000589940 FAM231CP0DMU5 169 aa12.37□□□□□ -0.43
CXXC1-212ENST00000589940 TEX48A0A1B0GUV7 120 aa12.36□□□□□ -0.43
CXXC1-212ENST00000589940 RPL32P62910 135 aaKnown RBP12.36□□□□□ -0.43
CXXC1-212ENST00000589940 DAD1P61803 113 aa12.35□□□□□ -0.43
CXXC1-212ENST00000589940 TMEM70Q9BUB7 260 aa12.35□□□□□ -0.43
CXXC1-212ENST00000589940 HUWE1Q7Z6Z7 4374 aaKnown RBP12.35□□□□□ -0.43
CXXC1-212ENST00000589940 TRGV4A0A0C4DH28 118 aa12.35□□□□□ -0.43
CXXC1-212ENST00000589940 SDHAF1A6NFY7 115 aa12.35□□□□□ -0.43
CXXC1-212ENST00000589940 POLR2KP53803 58 aaKnown RBP12.35□□□□□ -0.43
CXXC1-212ENST00000589940 FHL2Q14192 279 aa12.35□□□□□ -0.43
CXXC1-212ENST00000589940 HIST1H2BLQ99880 126 aa12.35□□□□□ -0.43
CXXC1-212ENST00000589940 LINC01546A6NGU7 62 aa12.34□□□□□ -0.43
CXXC1-212ENST00000589940 K7EQD1 137 aa12.34□□□□□ -0.43
CXXC1-212ENST00000589940 SLC25A29Q8N8R3 303 aa12.34□□□□□ -0.43
CXXC1-212ENST00000589940 NEXN-AS1Q8NBZ9 246 aa12.34□□□□□ -0.43
CXXC1-212ENST00000589940 TMEM18Q96B42 140 aa12.34□□□□□ -0.43
CXXC1-212ENST00000589940 Q9UF83 564 aa12.34□□□□□ -0.43
CXXC1-212ENST00000589940 TRBV10-1A0A0K0K1A3 114 aa12.33□□□□□ -0.44
CXXC1-212ENST00000589940 TRBV6-4A0A1B0GX49 114 aa12.33□□□□□ -0.44
CXXC1-212ENST00000589940 FABP4P15090 132 aa12.33□□□□□ -0.44
CXXC1-212ENST00000589940 AMTP48728 403 aa12.33□□□□□ -0.44
CXXC1-212ENST00000589940 FAM19A2Q8N3H0 131 aa12.33□□□□□ -0.44
CXXC1-212ENST00000589940 DNAJC30Q96LL9 226 aa12.33□□□□□ -0.44
CXXC1-212ENST00000589940 TNFRSF18Q9Y5U5 241 aa12.33□□□□□ -0.44
CXXC1-212ENST00000589940 TRBV27A0A0K0K1C4 114 aa12.33□□□□□ -0.44
CXXC1-212ENST00000589940 VCYO14598 125 aa12.33□□□□□ -0.44
CXXC1-212ENST00000589940 DNAH9Q9NYC9 4486 aa12.32□□□□□ -0.44
CXXC1-212ENST00000589940 IGHV1-24A0A0C4DH33 117 aa12.32□□□□□ -0.44
CXXC1-212ENST00000589940 PACRGQ96M98 296 aaPredicted RBP12.32□□□□□ -0.44
CXXC1-212ENST00000589940 PMCHL1Q16048 86 aa12.31□□□□□ -0.44
CXXC1-212ENST00000589940 NEGR1Q7Z3B1 354 aa12.31□□□□□ -0.44
CXXC1-212ENST00000589940 ZMAT4Q9H898 229 aa12.31□□□□□ -0.44
CXXC1-212ENST00000589940 MEGF8Q7Z7M0 2845 aa12.31□□□□□ -0.44
CXXC1-212ENST00000589940 A0A0J9YWU9 116 aa12.31□□□□□ -0.44
CXXC1-212ENST00000589940 K7EMI3 77 aa12.31□□□□□ -0.44
CXXC1-212ENST00000589940 TCAPO15273 167 aa12.31□□□□□ -0.44
CXXC1-212ENST00000589940 ATP5G1P05496 136 aa12.3□□□□□ -0.44
CXXC1-212ENST00000589940 LAGE3Q14657 143 aa12.3□□□□□ -0.44
CXXC1-212ENST00000589940 RHOHQ15669 191 aa12.3□□□□□ -0.44
CXXC1-212ENST00000589940 KIR2DL4Q99706 377 aa12.3□□□□□ -0.44
CXXC1-212ENST00000589940 B9D2Q9BPU9 175 aa12.3□□□□□ -0.44
CXXC1-212ENST00000589940 HHLA3Q9XRX5 114 aa12.3□□□□□ -0.44
CXXC1-212ENST00000589940 TRBV7-3A0A075B6L6 115 aa12.29□□□□□ -0.44
CXXC1-212ENST00000589940 RPL36AP83881 106 aaKnown RBP12.29□□□□□ -0.44
CXXC1-212ENST00000589940 RPL36ALQ969Q0 106 aaKnown RBP12.29□□□□□ -0.44
CXXC1-212ENST00000589940 I3L3M4 83 aa12.29□□□□□ -0.44
CXXC1-212ENST00000589940 C12orf74Q32Q52 190 aa12.29□□□□□ -0.44
CXXC1-212ENST00000589940 PRADC1Q9BSG0 188 aa12.29□□□□□ -0.44
CXXC1-212ENST00000589940 A0A096LNJ9 63 aa12.28□□□□□ -0.44
CXXC1-212ENST00000589940 ORMDL2Q53FV1 153 aa12.28□□□□□ -0.44
CXXC1-212ENST00000589940 ZNRF2Q8NHG8 242 aa12.28□□□□□ -0.44
CXXC1-212ENST00000589940 PRO0255Q9UI72 69 aa12.28□□□□□ -0.44
CXXC1-212ENST00000589940 CRYBA4P53673 196 aa12.27□□□□□ -0.44
CXXC1-212ENST00000589940 HBDP02042 147 aa12.27□□□□□ -0.45
CXXC1-212ENST00000589940 FCER1GP30273 86 aa12.27□□□□□ -0.45
CXXC1-212ENST00000589940 OR10D4PQ8NGN7 298 aa12.27□□□□□ -0.45
CXXC1-212ENST00000589940 LOC100131303A0A0U1RQF7 123 aa12.26□□□□□ -0.45
CXXC1-212ENST00000589940 GAGE12JA6NER3 117 aa12.26□□□□□ -0.45
CXXC1-212ENST00000589940 NUDT3O95989 172 aa12.26□□□□□ -0.45
CXXC1-212ENST00000589940 TSHBP01222 138 aa12.26□□□□□ -0.45
CXXC1-212ENST00000589940 UBE2D3P61077 147 aa12.26□□□□□ -0.45
CXXC1-212ENST00000589940 UBE2D2P62837 147 aa12.26□□□□□ -0.45
CXXC1-212ENST00000589940 GAGE1Q13065 139 aa12.26□□□□□ -0.45
CXXC1-212ENST00000589940 GAGE4Q13068 117 aa12.26□□□□□ -0.45
CXXC1-212ENST00000589940 GAGE5Q13069 117 aa12.26□□□□□ -0.45
CXXC1-212ENST00000589940 GAGE13Q4V321 117 aa12.26□□□□□ -0.45
CXXC1-212ENST00000589940 COL7A1Q02388 2944 aa12.25□□□□□ -0.45
CXXC1-212ENST00000589940 LEPROTL1O95214 131 aa12.25□□□□□ -0.45
CXXC1-212ENST00000589940 DEFB104AQ8WTQ1 72 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms