RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 LAGE3Q14657 143 aa8.66□□□□□ -1.02
CCBE1-203ENST00000589116 NIT2Q9NQR4 276 aa8.66□□□□□ -1.02
CCBE1-203ENST00000589116 TRAV4A0A0B4J268 109 aa8.65□□□□□ -1.02
CCBE1-203ENST00000589116 CIDEAO60543 219 aa8.65□□□□□ -1.02
CCBE1-203ENST00000589116 BTF3P20290 206 aaKnown RBP8.65□□□□□ -1.02
CCBE1-203ENST00000589116 FCER1GP30273 86 aa8.65□□□□□ -1.02
CCBE1-203ENST00000589116 POLR2KP53803 58 aaKnown RBP8.65□□□□□ -1.02
CCBE1-203ENST00000589116 ORMDL2Q53FV1 153 aa8.65□□□□□ -1.02
CCBE1-203ENST00000589116 Q6ZTI0 123 aa8.65□□□□□ -1.02
CCBE1-203ENST00000589116 OR4C5Q8NGB2 326 aa8.65□□□□□ -1.02
CCBE1-203ENST00000589116 TMEM70Q9BUB7 260 aa8.65□□□□□ -1.02
CCBE1-203ENST00000589116 NOP10Q9NPE3 64 aaKnown RBP8.65□□□□□ -1.02
CCBE1-203ENST00000589116 X6R8D5 127 aa8.65□□□□□ -1.02
CCBE1-203ENST00000589116 SCGB1D1O95968 90 aa8.65□□□□□ -1.03
CCBE1-203ENST00000589116 IGHV3-53P01767 116 aa8.65□□□□□ -1.03
CCBE1-203ENST00000589116 KMT2CQ8NEZ4 4911 aaKnown RBP8.65□□□□□ -1.03
CCBE1-203ENST00000589116 TRBV27A0A0K0K1C4 114 aa8.64□□□□□ -1.03
CCBE1-203ENST00000589116 SDHAF1A6NFY7 115 aa8.64□□□□□ -1.03
CCBE1-203ENST00000589116 VCYO14598 125 aa8.64□□□□□ -1.03
CCBE1-203ENST00000589116 DEFB135Q30KP9 77 aa8.64□□□□□ -1.03
CCBE1-203ENST00000589116 SAMD5Q5TGI4 173 aa8.64□□□□□ -1.03
CCBE1-203ENST00000589116 KIR2DL4Q99706 377 aa8.64□□□□□ -1.03
CCBE1-203ENST00000589116 MAP1LC3CQ9BXW4 147 aa8.64□□□□□ -1.03
CCBE1-203ENST00000589116 IGHV3-73A0A0B4J1V6 119 aa8.63□□□□□ -1.03
CCBE1-203ENST00000589116 TCAPO15273 167 aa8.63□□□□□ -1.03
CCBE1-203ENST00000589116 DNAJC30Q96LL9 226 aa8.63□□□□□ -1.03
CCBE1-203ENST00000589116 LINC01549A6NIU2 74 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 G0S2P27469 103 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 C18orf15Q96N68 181 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 RYR3Q15413 4870 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 TRGV2A0A075B6R0 118 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 C20orf202A1L168 122 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 G3V4G9 280 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 SYS1-DBNDD2H3BUS1 97 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 MIFP14174 115 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 S100A12P80511 92 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 PET117Q6UWS5 81 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 LINC00173Q6ZV60 143 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 LINC00612Q8N6U2 182 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 Q8N976 141 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 OR11H2Q8NH07 326 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 RNF183Q96D59 192 aa8.62□□□□□ -1.03
CCBE1-203ENST00000589116 TRBV10-1A0A0K0K1A3 114 aa8.61□□□□□ -1.03
CCBE1-203ENST00000589116 GAGE12BA1L429 117 aa8.61□□□□□ -1.03
CCBE1-203ENST00000589116 GAGE7O76087 117 aa8.61□□□□□ -1.03
CCBE1-203ENST00000589116 NUDT3O95989 172 aa8.61□□□□□ -1.03
CCBE1-203ENST00000589116 GAGE12FP0CL80 117 aa8.61□□□□□ -1.03
CCBE1-203ENST00000589116 GAGE12GP0CL81 117 aa8.61□□□□□ -1.03
CCBE1-203ENST00000589116 GAGE12IP0CL82 117 aa8.61□□□□□ -1.03
CCBE1-203ENST00000589116 CDPF1Q6NVV7 123 aa8.61□□□□□ -1.03
CCBE1-203ENST00000589116 SPATA12Q7Z6I5 190 aa8.61□□□□□ -1.03
CCBE1-203ENST00000589116 ZNF479Q96JC4 524 aa8.61□□□□□ -1.03
CCBE1-203ENST00000589116 TNFRSF18Q9Y5U5 241 aa8.61□□□□□ -1.03
CCBE1-203ENST00000589116 LYRM9A8MSI8 78 aa8.6□□□□□ -1.03
CCBE1-203ENST00000589116 I3L3M4 83 aa8.6□□□□□ -1.03
CCBE1-203ENST00000589116 ATP5LO75964 103 aa8.6□□□□□ -1.03
CCBE1-203ENST00000589116 RHOHQ15669 191 aa8.6□□□□□ -1.03
CCBE1-203ENST00000589116 TEX43Q6ZNM6 134 aa8.6□□□□□ -1.03
CCBE1-203ENST00000589116 Q6ZSN1 163 aa8.6□□□□□ -1.03
CCBE1-203ENST00000589116 IFI27L1Q96BM0 104 aa8.6□□□□□ -1.03
CCBE1-203ENST00000589116 TP53TG1Q9Y2A0 90 aa8.6□□□□□ -1.03
CCBE1-203ENST00000589116 K7EQD1 137 aa8.59□□□□□ -1.03
CCBE1-203ENST00000589116 NEXN-AS1Q8NBZ9 246 aa8.59□□□□□ -1.03
CCBE1-203ENST00000589116 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
CCBE1-203ENST00000589116 P0DMU3 169 aa8.59□□□□□ -1.03
CCBE1-203ENST00000589116 FAM231AP0DMU4 169 aa8.59□□□□□ -1.03
CCBE1-203ENST00000589116 FAM231CP0DMU5 169 aa8.59□□□□□ -1.03
CCBE1-203ENST00000589116 EMP1P54849 157 aa8.59□□□□□ -1.03
CCBE1-203ENST00000589116 NEGR1Q7Z3B1 354 aa8.59□□□□□ -1.03
CCBE1-203ENST00000589116 Q8NAQ8 132 aa8.59□□□□□ -1.03
CCBE1-203ENST00000589116 CMYA5Q8N3K9 4069 aa8.58□□□□□ -1.04
CCBE1-203ENST00000589116 IGHV4-28A0A0C4DH34 117 aa8.58□□□□□ -1.04
CCBE1-203ENST00000589116 TRBV6-4A0A1B0GX49 114 aa8.58□□□□□ -1.04
CCBE1-203ENST00000589116 LINC01545Q5VT33 79 aa8.58□□□□□ -1.04
CCBE1-203ENST00000589116 C2orf66Q6UXQ4 117 aa8.58□□□□□ -1.04
CCBE1-203ENST00000589116 CYSLTR1Q9Y271 337 aa8.58□□□□□ -1.04
CCBE1-203ENST00000589116 TSHBP01222 138 aa8.57□□□□□ -1.04
CCBE1-203ENST00000589116 LGALS9CQ6DKI2 356 aa8.57□□□□□ -1.04
CCBE1-203ENST00000589116 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
CCBE1-203ENST00000589116 TRGV4A0A0C4DH28 118 aa8.56□□□□□ -1.04
CCBE1-203ENST00000589116 RPL36AP83881 106 aaKnown RBP8.56□□□□□ -1.04
CCBE1-203ENST00000589116 FAM222AQ5U5X8 452 aa8.56□□□□□ -1.04
CCBE1-203ENST00000589116 RPL36ALQ969Q0 106 aaKnown RBP8.56□□□□□ -1.04
CCBE1-203ENST00000589116 VAMP8Q9BV40 100 aa8.56□□□□□ -1.04
CCBE1-203ENST00000589116 DKK2Q9UBU2 259 aa8.56□□□□□ -1.04
CCBE1-203ENST00000589116 TEX48A0A1B0GUV7 120 aa8.56□□□□□ -1.04
CCBE1-203ENST00000589116 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.56□□□□□ -1.04
CCBE1-203ENST00000589116 DEFB130BP0DP73 79 aa8.56□□□□□ -1.04
CCBE1-203ENST00000589116 DEFB130AP0DP74 79 aa8.56□□□□□ -1.04
CCBE1-203ENST00000589116 KPRPQ5T749 579 aaPredicted RBP8.56□□□□□ -1.04
CCBE1-203ENST00000589116 SLC25A29Q8N8R3 303 aa8.56□□□□□ -1.04
CCBE1-203ENST00000589116 SCGB3A1Q96QR1 104 aa8.56□□□□□ -1.04
CCBE1-203ENST00000589116 H0Y8G0 127 aa8.55□□□□□ -1.04
CCBE1-203ENST00000589116 FHL2Q14192 279 aa8.55□□□□□ -1.04
CCBE1-203ENST00000589116 ERASQ7Z444 233 aa8.55□□□□□ -1.04
CCBE1-203ENST00000589116 PKIAP61925 76 aa8.54□□□□□ -1.04
CCBE1-203ENST00000589116 Q6ZN92 141 aa8.54□□□□□ -1.04
CCBE1-203ENST00000589116 DAZ4Q86SG3 579 aaKnown RBP8.54□□□□□ -1.04
CCBE1-203ENST00000589116 C20orf203Q8NBC4 194 aa8.54□□□□□ -1.04
CCBE1-203ENST00000589116 ZNRF2Q8NHG8 242 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms