RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, human

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC2-211	ENST00000588652	MDFIC	Q9P1T7	246 aa		12.96	□□□□□ -0.33
ERCC2-211	ENST00000588652	TP53TG1	Q9Y2A0	90 aa		12.96	□□□□□ -0.33
ERCC2-211	ENST00000588652	IGHV1OR15-1	A0A075B7D0	117 aa		12.96	□□□□□ -0.34
ERCC2-211	ENST00000588652	C12orf74	Q32Q52	190 aa		12.96	□□□□□ -0.34
ERCC2-211	ENST00000588652	HIST2H2BD	Q6DRA6	164 aa		12.96	□□□□□ -0.34
ERCC2-211	ENST00000588652	DLX4	Q92988	240 aa	Predicted RBP	12.96	□□□□□ -0.34
ERCC2-211	ENST00000588652	PRADC1	Q9BSG0	188 aa		12.96	□□□□□ -0.34
ERCC2-211	ENST00000588652	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.95	□□□□□ -0.34
ERCC2-211	ENST00000588652	IGLL5	B9A064	214 aa		12.95	□□□□□ -0.34
ERCC2-211	ENST00000588652	PAPPA-AS1	Q5QFB9	102 aa		12.95	□□□□□ -0.34
ERCC2-211	ENST00000588652	FAM74A4	Q5TZK3	123 aa		12.95	□□□□□ -0.34
ERCC2-211	ENST00000588652	NF1	P21359	2839 aa		12.95	□□□□□ -0.34
ERCC2-211	ENST00000588652		J3QKU1	62 aa		12.94	□□□□□ -0.34
ERCC2-211	ENST00000588652	TMEM61	Q8N0U2	210 aa		12.94	□□□□□ -0.34
ERCC2-211	ENST00000588652	DEFB104A	Q8WTQ1	72 aa		12.94	□□□□□ -0.34
ERCC2-211	ENST00000588652	AKAP9	Q99996	3911 aa		12.94	□□□□□ -0.34
ERCC2-211	ENST00000588652	SDHAF1	A6NFY7	115 aa		12.94	□□□□□ -0.34
ERCC2-211	ENST00000588652	IGIP	A6NJ69	53 aa		12.94	□□□□□ -0.34
ERCC2-211	ENST00000588652	DEFB131A	P59861	70 aa		12.94	□□□□□ -0.34
ERCC2-211	ENST00000588652	TMEM141	Q96I45	108 aa		12.94	□□□□□ -0.34
ERCC2-211	ENST00000588652	ESM1	Q9NQ30	184 aa		12.94	□□□□□ -0.34
ERCC2-211	ENST00000588652	IGLV4-69	A0A075B6H9	119 aa		12.93	□□□□□ -0.34
ERCC2-211	ENST00000588652	KNCN	A6PVL3	124 aa		12.93	□□□□□ -0.34
ERCC2-211	ENST00000588652	CUBN	O60494	3623 aa		12.93	□□□□□ -0.34
ERCC2-211	ENST00000588652	KRTAP1-1	Q07627	177 aa		12.93	□□□□□ -0.34
ERCC2-211	ENST00000588652	PMVK	Q15126	192 aa		12.93	□□□□□ -0.34
ERCC2-211	ENST00000588652	ZNF56	Q15929	161 aa		12.93	□□□□□ -0.34
ERCC2-211	ENST00000588652	TRAV2	A0A0B4J234	112 aa		12.92	□□□□□ -0.34
ERCC2-211	ENST00000588652	TRBV6-5	A0A0K0K1A5	114 aa		12.92	□□□□□ -0.34
ERCC2-211	ENST00000588652	HERVK_113	P61574	105 aa		12.92	□□□□□ -0.34
ERCC2-211	ENST00000588652	RPL39	P62891	51 aa	Known RBP	12.92	□□□□□ -0.34
ERCC2-211	ENST00000588652	ITPR2	Q14571	2701 aa		12.92	□□□□□ -0.34
ERCC2-211	ENST00000588652	HELZ2	Q9BYK8	2649 aa	Known RBP	12.92	□□□□□ -0.34
ERCC2-211	ENST00000588652	C11orf86	A6NJI1	115 aa		12.92	□□□□□ -0.34
ERCC2-211	ENST00000588652		G3V4G9	280 aa		12.92	□□□□□ -0.34
ERCC2-211	ENST00000588652	ZNF479	Q96JC4	524 aa		12.92	□□□□□ -0.34
ERCC2-211	ENST00000588652	TRBV27	A0A0K0K1C4	114 aa		12.91	□□□□□ -0.34
ERCC2-211	ENST00000588652		A0A1B0GWB2	263 aa		12.91	□□□□□ -0.34
ERCC2-211	ENST00000588652	ZNF815P	A8K554	130 aa		12.91	□□□□□ -0.34
ERCC2-211	ENST00000588652	RIPPLY3	P57055	190 aa		12.91	□□□□□ -0.34
ERCC2-211	ENST00000588652	TIMM17A	Q99595	171 aa		12.91	□□□□□ -0.34
ERCC2-211	ENST00000588652		A8MTW9	85 aa		12.91	□□□□□ -0.34
ERCC2-211	ENST00000588652		H3BMM0	161 aa		12.91	□□□□□ -0.34
ERCC2-211	ENST00000588652	SCGB1D4	Q6XE38	83 aa		12.91	□□□□□ -0.34
ERCC2-211	ENST00000588652	ACAN	P16112	2415 aa		12.9	□□□□□ -0.34
ERCC2-211	ENST00000588652	RBMY1A1	P0DJD3	496 aa	Known RBP	12.9	□□□□□ -0.34
ERCC2-211	ENST00000588652	RBMY1C	P0DJD4	496 aa		12.9	□□□□□ -0.34
ERCC2-211	ENST00000588652	RBMY1F	Q15415	496 aa	Known RBP	12.9	□□□□□ -0.34
ERCC2-211	ENST00000588652	CD300E	Q496F6	205 aa	Predicted RBP	12.9	□□□□□ -0.34
ERCC2-211	ENST00000588652	MORN3	Q6PF18	240 aa	Predicted RBP	12.9	□□□□□ -0.34
ERCC2-211	ENST00000588652	DYNLRB2	Q8TF09	96 aa		12.9	□□□□□ -0.34
ERCC2-211	ENST00000588652	DEFB114	Q30KQ6	69 aa		12.9	□□□□□ -0.34
ERCC2-211	ENST00000588652	PLEKHB2	Q96CS7	222 aa		12.9	□□□□□ -0.34
ERCC2-211	ENST00000588652	ZNF256	Q9Y2P7	627 aa	Predicted RBP	12.9	□□□□□ -0.34
ERCC2-211	ENST00000588652	EMP1	P54849	157 aa		12.89	□□□□□ -0.35
ERCC2-211	ENST00000588652	TRPT1	Q86TN4	253 aa	Known RBP	12.89	□□□□□ -0.35
ERCC2-211	ENST00000588652		M0QY20	66 aa		12.89	□□□□□ -0.35
ERCC2-211	ENST00000588652	RRN3P1	Q2M238	152 aa		12.89	□□□□□ -0.35
ERCC2-211	ENST00000588652	TRGV11	A0A075B6L2	103 aa		12.88	□□□□□ -0.35
ERCC2-211	ENST00000588652	RBMY1B	A6NDE4	496 aa	Known RBP	12.88	□□□□□ -0.35
ERCC2-211	ENST00000588652	RBMY1E	A6NEQ0	496 aa	Known RBP	12.88	□□□□□ -0.35
ERCC2-211	ENST00000588652	RBMY1D	P0C7P1	496 aa	Known RBP	12.88	□□□□□ -0.35
ERCC2-211	ENST00000588652	C11orf44	Q8N8P7	122 aa		12.88	□□□□□ -0.35
ERCC2-211	ENST00000588652	RAX2	Q96IS3	184 aa		12.88	□□□□□ -0.35
ERCC2-211	ENST00000588652	MAP6D1	Q9H9H5	199 aa		12.88	□□□□□ -0.35
ERCC2-211	ENST00000588652	YAE1D1	Q9NRH1	226 aa		12.88	□□□□□ -0.35
ERCC2-211	ENST00000588652	SRSF9	Q13242	221 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
ERCC2-211	ENST00000588652	ZNF876P	Q49A33	203 aa		12.87	□□□□□ -0.35
ERCC2-211	ENST00000588652	RHOH	Q15669	191 aa		12.87	□□□□□ -0.35
ERCC2-211	ENST00000588652	WNK1	Q9H4A3	2382 aa		12.86	□□□□□ -0.35
ERCC2-211	ENST00000588652	FHL3	Q13643	280 aa		12.86	□□□□□ -0.35
ERCC2-211	ENST00000588652	TMEM170B	Q5T4T1	132 aa		12.86	□□□□□ -0.35
ERCC2-211	ENST00000588652		A0A1W2PRX2	142 aa		12.85	□□□□□ -0.35
ERCC2-211	ENST00000588652	CD28	P10747	220 aa		12.85	□□□□□ -0.35
ERCC2-211	ENST00000588652	NSUN5P1	Q3KNT7	163 aa		12.85	□□□□□ -0.35
ERCC2-211	ENST00000588652	UNC79	Q9P2D8	2635 aa		12.85	□□□□□ -0.35
ERCC2-211	ENST00000588652	HTN1	P15515	57 aa		12.84	□□□□□ -0.35
ERCC2-211	ENST00000588652	C4orf48	Q5BLP8	95 aa		12.84	□□□□□ -0.35
ERCC2-211	ENST00000588652	ZNRF2	Q8NHG8	242 aa		12.84	□□□□□ -0.35
ERCC2-211	ENST00000588652	SPAG8	Q99932	426 aa	Predicted RBP	12.84	□□□□□ -0.35
ERCC2-211	ENST00000588652	TEX48	A0A1B0GUV7	120 aa		12.84	□□□□□ -0.35
ERCC2-211	ENST00000588652	RPL24	P83731	157 aa	Known RBP	12.84	□□□□□ -0.35
ERCC2-211	ENST00000588652	TSPEAR-AS2	P59090	65 aa		12.83	□□□□□ -0.35
ERCC2-211	ENST00000588652		F8W1H4	67 aa		12.83	□□□□□ -0.36
ERCC2-211	ENST00000588652		H3BMG7	143 aa		12.83	□□□□□ -0.36
ERCC2-211	ENST00000588652		I3L3M4	83 aa		12.83	□□□□□ -0.36
ERCC2-211	ENST00000588652	CCL24	O00175	119 aa		12.83	□□□□□ -0.36
ERCC2-211	ENST00000588652	MTOR	P42345	2549 aa		12.83	□□□□□ -0.36
ERCC2-211	ENST00000588652	RNASE1	P07998	156 aa	Known RBP	12.82	□□□□□ -0.36
ERCC2-211	ENST00000588652	LINC01006	Q8NI28	216 aa		12.82	□□□□□ -0.36
ERCC2-211	ENST00000588652		A0A0J9YY99	117 aa		12.82	□□□□□ -0.36
ERCC2-211	ENST00000588652		P0DMU3	169 aa		12.82	□□□□□ -0.36
ERCC2-211	ENST00000588652	FAM231A	P0DMU4	169 aa		12.82	□□□□□ -0.36
ERCC2-211	ENST00000588652	FAM231C	P0DMU5	169 aa		12.82	□□□□□ -0.36
ERCC2-211	ENST00000588652	UBE2D1	P51668	147 aa		12.82	□□□□□ -0.36
ERCC2-211	ENST00000588652	WFDC2	Q14508	124 aa		12.82	□□□□□ -0.36
ERCC2-211	ENST00000588652	CITED2	Q99967	270 aa	Predicted RBP	12.82	□□□□□ -0.36
ERCC2-211	ENST00000588652	PRM2	P04554	102 aa		12.81	□□□□□ -0.36
ERCC2-211	ENST00000588652	OPRPN	Q99935	248 aa	Predicted RBP	12.81	□□□□□ -0.36
ERCC2-211	ENST00000588652	ANK3	Q12955	4377 aa	Known RBP	12.81	□□□□□ -0.36

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