RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 PRELID3AQ96N28 172 aa15.9■□□□□ 0.14
ACTN4-210ENST00000588618 A0A0J9YY99 117 aa15.89■□□□□ 0.13
ACTN4-210ENST00000588618 NIT2Q9NQR4 276 aa15.89■□□□□ 0.13
ACTN4-210ENST00000588618 TNFRSF18Q9Y5U5 241 aa15.89■□□□□ 0.13
ACTN4-210ENST00000588618 PHLDA1Q8WV24 401 aaPredicted RBP15.88■□□□□ 0.13
ACTN4-210ENST00000588618 RPL39LQ96EH5 51 aaKnown RBP15.88■□□□□ 0.13
ACTN4-210ENST00000588618 LAMTOR2Q9Y2Q5 125 aa15.88■□□□□ 0.13
ACTN4-210ENST00000588618 RPL36AP83881 106 aaKnown RBP15.88■□□□□ 0.13
ACTN4-210ENST00000588618 RPL36ALQ969Q0 106 aaKnown RBP15.88■□□□□ 0.13
ACTN4-210ENST00000588618 DYNC2H1Q8NCM8 4307 aaKnown RBP15.88■□□□□ 0.13
ACTN4-210ENST00000588618 SRIP30626 198 aa15.87■□□□□ 0.13
ACTN4-210ENST00000588618 NRACQ8N912 160 aa15.87■□□□□ 0.13
ACTN4-210ENST00000588618 ALKBH7Q9BT30 221 aaPredicted RBP15.87■□□□□ 0.13
ACTN4-210ENST00000588618 CSMD3Q7Z407 3707 aa15.86■□□□□ 0.13
ACTN4-210ENST00000588618 TNFRSF6BO95407 300 aa15.86■□□□□ 0.13
ACTN4-210ENST00000588618 GYPEP15421 78 aa15.86■□□□□ 0.13
ACTN4-210ENST00000588618 DNAJC30Q96LL9 226 aa15.86■□□□□ 0.13
ACTN4-210ENST00000588618 NPYP01303 97 aa15.85■□□□□ 0.13
ACTN4-210ENST00000588618 NEXN-AS1Q8NBZ9 246 aa15.85■□□□□ 0.13
ACTN4-210ENST00000588618 ST20Q9HBF5 79 aa15.85■□□□□ 0.13
ACTN4-210ENST00000588618 TRBV7-3A0A075B6L6 115 aa15.85■□□□□ 0.13
ACTN4-210ENST00000588618 GAGE12JA6NER3 117 aa15.85■□□□□ 0.13
ACTN4-210ENST00000588618 GAGE1Q13065 139 aa15.85■□□□□ 0.13
ACTN4-210ENST00000588618 GAGE4Q13068 117 aa15.85■□□□□ 0.13
ACTN4-210ENST00000588618 GAGE5Q13069 117 aa15.85■□□□□ 0.13
ACTN4-210ENST00000588618 GAGE13Q4V321 117 aa15.85■□□□□ 0.13
ACTN4-210ENST00000588618 ZNRF2Q8NHG8 242 aa15.85■□□□□ 0.13
ACTN4-210ENST00000588618 VSIG2Q96IQ7 327 aa15.84■□□□□ 0.13
ACTN4-210ENST00000588618 LOC100131303A0A0U1RQF7 123 aa15.83■□□□□ 0.13
ACTN4-210ENST00000588618 C1orf196B1AJZ1 125 aa15.83■□□□□ 0.13
ACTN4-210ENST00000588618 SUMO2P61956 95 aaKnown RBP15.83■□□□□ 0.13
ACTN4-210ENST00000588618 MAP1LC3AQ9H492 121 aa15.83■□□□□ 0.13
ACTN4-210ENST00000588618 C20orf78Q9BR46 151 aa15.82■□□□□ 0.12
ACTN4-210ENST00000588618 ICOSQ9Y6W8 199 aa15.82■□□□□ 0.12
ACTN4-210ENST00000588618 H3BNG1 76 aa15.82■□□□□ 0.12
ACTN4-210ENST00000588618 TRBV6-5A0A0K0K1A5 114 aa15.81■□□□□ 0.12
ACTN4-210ENST00000588618 SDHAF1A6NFY7 115 aa15.81■□□□□ 0.12
ACTN4-210ENST00000588618 MRPL23Q16540 153 aaKnown RBP15.81■□□□□ 0.12
ACTN4-210ENST00000588618 LOC389332A0A1B0GUA5 103 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 NUPR2A6NF83 97 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 IGLL5B9A064 214 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 HIST1H2BKO60814 126 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 HIST1H2BJP06899 126 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 HIST1H2BOP23527 126 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 HIST1H2BBP33778 126 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 HIST1H2BDP58876 126 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 HIST1H2BCP62807 126 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 HIST2H2BEQ16778 126 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.8■□□□□ 0.12
ACTN4-210ENST00000588618 HIST1H2BHQ93079 126 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 HIST1H2BNQ99877 126 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 HIST1H2BMQ99879 126 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 STARD9Q9P2P6 4700 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 NUDT3O95989 172 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 WWC2-AS2Q96NR7 200 aa15.8■□□□□ 0.12
ACTN4-210ENST00000588618 PLECQ15149 4684 aaKnown RBP15.79■□□□□ 0.12
ACTN4-210ENST00000588618 IQCJQ1A5X6 159 aa15.79■□□□□ 0.12
ACTN4-210ENST00000588618 C18orf32Q8TCD1 76 aa15.79■□□□□ 0.12
ACTN4-210ENST00000588618 CEMP1Q6PRD7 247 aaPredicted RBP15.78■□□□□ 0.12
ACTN4-210ENST00000588618 SH2D6Q7Z4S9 175 aa15.78■□□□□ 0.12
ACTN4-210ENST00000588618 DAZ4Q86SG3 579 aaKnown RBP15.78■□□□□ 0.12
ACTN4-210ENST00000588618 C15orf53Q8NAA6 179 aa15.78■□□□□ 0.12
ACTN4-210ENST00000588618 TMEM70Q9BUB7 260 aa15.78■□□□□ 0.12
ACTN4-210ENST00000588618 DAZ3Q9NR90 486 aaKnown RBP15.78■□□□□ 0.12
ACTN4-210ENST00000588618 KLK5Q9Y337 293 aaPredicted RBP15.78■□□□□ 0.12
ACTN4-210ENST00000588618 PMCHP20382 165 aa15.77■□□□□ 0.12
ACTN4-210ENST00000588618 RAB5BP61020 215 aa15.77■□□□□ 0.12
ACTN4-210ENST00000588618 UBE2D3P61077 147 aa15.77■□□□□ 0.12
ACTN4-210ENST00000588618 UBE2D2P62837 147 aa15.77■□□□□ 0.12
ACTN4-210ENST00000588618 PRSS3P2Q8NHM4 247 aa15.77■□□□□ 0.12
ACTN4-210ENST00000588618 A0A096LPF7 62 aa15.77■□□□□ 0.11
ACTN4-210ENST00000588618 VCYO14598 125 aa15.77■□□□□ 0.11
ACTN4-210ENST00000588618 ATP6V0E2Q8NHE4 81 aa15.77■□□□□ 0.11
ACTN4-210ENST00000588618 SMIM2Q9BVW6 85 aa15.77■□□□□ 0.11
ACTN4-210ENST00000588618 IGHV3-38A0A0C4DH36 116 aa15.76■□□□□ 0.11
ACTN4-210ENST00000588618 I3L3M4 83 aa15.76■□□□□ 0.11
ACTN4-210ENST00000588618 NEGR1Q7Z3B1 354 aa15.76■□□□□ 0.11
ACTN4-210ENST00000588618 KIR2DL4Q99706 377 aa15.76■□□□□ 0.11
ACTN4-210ENST00000588618 NXT2Q9NPJ8 142 aaKnown RBP15.76■□□□□ 0.11
ACTN4-210ENST00000588618 LINC00694P0DN24 101 aa15.75■□□□□ 0.11
ACTN4-210ENST00000588618 POLR2KP53803 58 aaKnown RBP15.75■□□□□ 0.11
ACTN4-210ENST00000588618 TRBV27A0A0K0K1C4 114 aa15.74■□□□□ 0.11
ACTN4-210ENST00000588618 RPL32P62910 135 aaKnown RBP15.74■□□□□ 0.11
ACTN4-210ENST00000588618 BAGE3Q86Y29 109 aa15.74■□□□□ 0.11
ACTN4-210ENST00000588618 MUC7Q8TAX7 377 aa15.74■□□□□ 0.11
ACTN4-210ENST00000588618 PRSS47A8MTI9 375 aa15.74■□□□□ 0.11
ACTN4-210ENST00000588618 IFI27P40305 119 aaPredicted RBP15.74■□□□□ 0.11
ACTN4-210ENST00000588618 DEFB104AQ8WTQ1 72 aa15.74■□□□□ 0.11
ACTN4-210ENST00000588618 URB1-AS1Q96HZ7 61 aa15.74■□□□□ 0.11
ACTN4-210ENST00000588618 IGLV2-18A0A075B6J9 118 aa15.73■□□□□ 0.11
ACTN4-210ENST00000588618 FCER1GP30273 86 aa15.73■□□□□ 0.11
ACTN4-210ENST00000588618 COTL1Q14019 142 aa15.73■□□□□ 0.11
ACTN4-210ENST00000588618 FA2HQ7L5A8 372 aa15.72■□□□□ 0.11
ACTN4-210ENST00000588618 Q8N8P6 123 aa15.72■□□□□ 0.11
ACTN4-210ENST00000588618 LINC00310P59036 64 aa15.71■□□□□ 0.11
ACTN4-210ENST00000588618 Q0VG73 95 aa15.71■□□□□ 0.11
ACTN4-210ENST00000588618 ZFAND6Q6FIF0 208 aa15.71■□□□□ 0.11
ACTN4-210ENST00000588618 TCAPO15273 167 aa15.71■□□□□ 0.1
ACTN4-210ENST00000588618 TMEM97Q5BJF2 176 aa15.71■□□□□ 0.1
ACTN4-210ENST00000588618 GTSF1LQ9H1H1 148 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms