RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 IFT20Q8IY31 132 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 OR8I2Q8N0Y5 310 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 CBLN4Q9NTU7 201 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 HSPB8Q9UJY1 196 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 HS3ST2Q9Y278 367 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 FRAS1Q86XX4 4008 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 ANK1P16157 1881 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 MED12LQ86YW9 2145 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 MYO18AQ92614 2054 aaKnown RBP2.19□□□□□ -2.06
TUBD1-208ENST00000588009 MYH1P12882 1939 aa2.19□□□□□ -2.06
TUBD1-208ENST00000588009 B4DSR2 109 aa2.19□□□□□ -2.06
TUBD1-208ENST00000588009 HIST1H2BKO60814 126 aa2.19□□□□□ -2.06
TUBD1-208ENST00000588009 TIMM17BO60830 172 aa2.19□□□□□ -2.06
TUBD1-208ENST00000588009 UBL3O95164 117 aa2.19□□□□□ -2.06
TUBD1-208ENST00000588009 HIST1H2BJP06899 126 aa2.19□□□□□ -2.06
TUBD1-208ENST00000588009 DBIP07108 87 aaKnown RBP2.19□□□□□ -2.06
TUBD1-208ENST00000588009 VMA21Q3ZAQ7 101 aa2.19□□□□□ -2.06
TUBD1-208ENST00000588009 CCDC58Q4VC31 144 aa2.19□□□□□ -2.06
TUBD1-208ENST00000588009 EIF5AL1Q6IS14 154 aaKnown RBP2.19□□□□□ -2.06
TUBD1-208ENST00000588009 LINC00311Q8N616 119 aa2.19□□□□□ -2.06
TUBD1-208ENST00000588009 CCDC171Q6TFL3 1326 aa2.18□□□□□ -2.06
TUBD1-208ENST00000588009 PROSCO94903 275 aa2.18□□□□□ -2.06
TUBD1-208ENST00000588009 OR2H2O95918 312 aa2.18□□□□□ -2.06
TUBD1-208ENST00000588009 CMPK1P30085 196 aa2.18□□□□□ -2.06
TUBD1-208ENST00000588009 LINC00305Q7Z4B0 112 aa2.18□□□□□ -2.06
TUBD1-208ENST00000588009 TEX29Q8N6K0 151 aa2.18□□□□□ -2.06
TUBD1-208ENST00000588009 LINC00301Q8NCQ3 95 aa2.18□□□□□ -2.06
TUBD1-208ENST00000588009 LXNQ9BS40 222 aa2.18□□□□□ -2.06
TUBD1-208ENST00000588009 TCEAL2Q9H3H9 227 aaPredicted RBP2.18□□□□□ -2.06
TUBD1-208ENST00000588009 NIT2Q9NQR4 276 aa2.18□□□□□ -2.06
TUBD1-208ENST00000588009 CMYA5Q8N3K9 4069 aa2.18□□□□□ -2.06
TUBD1-208ENST00000588009 RNF213Q63HN8 5207 aa2.18□□□□□ -2.06
TUBD1-208ENST00000588009 FAT4Q6V0I7 4981 aa2.17□□□□□ -2.06
TUBD1-208ENST00000588009 TRAV14DV4A0A0A6YYC5 116 aa2.17□□□□□ -2.06
TUBD1-208ENST00000588009 C2orf70A6NJV1 201 aa2.17□□□□□ -2.06
TUBD1-208ENST00000588009 A8MWV9 139 aa2.17□□□□□ -2.06
TUBD1-208ENST00000588009 MPC1LP0DKB6 136 aa2.17□□□□□ -2.06
TUBD1-208ENST00000588009 MYL5Q02045 173 aa2.17□□□□□ -2.06
TUBD1-208ENST00000588009 ZNF563Q8TA94 476 aa2.17□□□□□ -2.06
TUBD1-208ENST00000588009 ZNF714Q96N38 554 aa2.17□□□□□ -2.06
TUBD1-208ENST00000588009 LINC00467Q9BRT7 94 aa2.17□□□□□ -2.06
TUBD1-208ENST00000588009 OR5AC2Q9NZP5 309 aa2.17□□□□□ -2.06
TUBD1-208ENST00000588009 RER1O15258 196 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 OR1I1O60431 355 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 DPM2O94777 84 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 IGLV1-51P01701 117 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 MT-ND4LP03901 98 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 ROMO1P60602 79 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 HIST1H1AQ02539 215 aaPredicted RBP2.16□□□□□ -2.06
TUBD1-208ENST00000588009 C10orf55Q5SWW7 151 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 C4orf22Q6V702 233 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 TCTE3Q8IZS6 198 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 PFDN5Q99471 154 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 TPT1P8Q9HAU6 139 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 C14orf132Q9NPU4 83 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 COPZ2Q9P299 210 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 TANC2Q9HCD6 1990 aa2.16□□□□□ -2.06
TUBD1-208ENST00000588009 NCOA6Q14686 2063 aaPredicted RBP2.15□□□□□ -2.07
TUBD1-208ENST00000588009 TRAV13-1A0A0B4J241 112 aa2.15□□□□□ -2.07
TUBD1-208ENST00000588009 TRAV12-1A0A0B4J245 112 aa2.15□□□□□ -2.07
TUBD1-208ENST00000588009 COX4I1P13073 169 aa2.15□□□□□ -2.07
TUBD1-208ENST00000588009 RPL22P35268 128 aaKnown RBP2.15□□□□□ -2.07
TUBD1-208ENST00000588009 NDUFA6P56556 154 aa2.15□□□□□ -2.07
TUBD1-208ENST00000588009 PDE6HQ13956 83 aa2.15□□□□□ -2.07
TUBD1-208ENST00000588009 TMEM14EPQ6UXP3 125 aa2.15□□□□□ -2.07
TUBD1-208ENST00000588009 OR51A4Q8NGJ6 313 aa2.15□□□□□ -2.07
TUBD1-208ENST00000588009 OR4C6Q8NH72 309 aa2.15□□□□□ -2.07
TUBD1-208ENST00000588009 BRK1Q8WUW1 75 aa2.15□□□□□ -2.07
TUBD1-208ENST00000588009 NAT14Q8WUY8 206 aa2.15□□□□□ -2.07
TUBD1-208ENST00000588009 DIRC1Q969H9 104 aa2.15□□□□□ -2.07
TUBD1-208ENST00000588009 RETNLBQ9BQ08 111 aa2.15□□□□□ -2.07
TUBD1-208ENST00000588009 MYOFQ9NZM1 2061 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 TRBV27A0A0K0K1C4 114 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 EFCAB10A6NFE3 127 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 H3BMG7 143 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 APODP05090 189 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 BRS3P32247 399 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 KLRD1Q13241 179 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 TMEM244Q5VVB8 128 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 Q8N2B8 174 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 OR5D16Q8NGK9 328 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 OR4K15Q8NH41 348 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 TSC22D3Q99576 134 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 NAA38Q9BRA0 125 aaKnown RBP2.14□□□□□ -2.07
TUBD1-208ENST00000588009 U3KQ87 197 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 U3KQA8 63 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 MYH8P13535 1937 aa2.14□□□□□ -2.07
TUBD1-208ENST00000588009 IGKV2D-26A0A0A0MRZ7 120 aa2.13□□□□□ -2.07
TUBD1-208ENST00000588009 IFNA4P05014 189 aa2.13□□□□□ -2.07
TUBD1-208ENST00000588009 RNASE3P12724 160 aaKnown RBP2.13□□□□□ -2.07
TUBD1-208ENST00000588009 CRYGSP22914 178 aa2.13□□□□□ -2.07
TUBD1-208ENST00000588009 FOXA3P55318 350 aaPredicted RBP2.13□□□□□ -2.07
TUBD1-208ENST00000588009 GLYATL3Q5SZD4 288 aa2.13□□□□□ -2.07
TUBD1-208ENST00000588009 Q8N814 137 aa2.13□□□□□ -2.07
TUBD1-208ENST00000588009 OR5H6Q8NGV6 325 aa2.13□□□□□ -2.07
TUBD1-208ENST00000588009 SFT2D1Q8WV19 159 aa2.13□□□□□ -2.07
TUBD1-208ENST00000588009 POP5Q969H6 163 aaKnown RBP2.13□□□□□ -2.07
TUBD1-208ENST00000588009 CHCHD1Q96BP2 118 aaKnown RBP2.13□□□□□ -2.07
TUBD1-208ENST00000588009 DSPPQ9NZW4 1301 aa2.13□□□□□ -2.07
TUBD1-208ENST00000588009 SORL1Q92673 2214 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms