RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 FAM110AQ9BQ89 295 aa13.46□□□□□ -0.26
RETREG3-205ENST00000586870 PMCHL2Q9BQD1 86 aa13.46□□□□□ -0.26
RETREG3-205ENST00000586870 GOLT1BQ9Y3E0 138 aa13.46□□□□□ -0.26
RETREG3-205ENST00000586870 NUDT3O95989 172 aa13.45□□□□□ -0.26
RETREG3-205ENST00000586870 C18orf15Q96N68 181 aa13.45□□□□□ -0.26
RETREG3-205ENST00000586870 LINC01587Q99440 93 aa13.45□□□□□ -0.26
RETREG3-205ENST00000586870 TRBV6-5A0A0K0K1A5 114 aa13.44□□□□□ -0.26
RETREG3-205ENST00000586870 Q6ZN92 141 aa13.44□□□□□ -0.26
RETREG3-205ENST00000586870 HNRNPA3P51991 378 aaKnown RBP13.43□□□□□ -0.26
RETREG3-205ENST00000586870 C2orf88Q9BSF0 95 aa13.43□□□□□ -0.26
RETREG3-205ENST00000586870 CSTL1Q9H114 145 aa13.43□□□□□ -0.26
RETREG3-205ENST00000586870 M0R2P5 195 aa13.42□□□□□ -0.26
RETREG3-205ENST00000586870 IGHV4-30-4P0DP06 118 aa13.42□□□□□ -0.26
RETREG3-205ENST00000586870 HTN1P15515 57 aa13.42□□□□□ -0.26
RETREG3-205ENST00000586870 POLR2KP53803 58 aaKnown RBP13.42□□□□□ -0.26
RETREG3-205ENST00000586870 NUTF2P61970 127 aaKnown RBP13.42□□□□□ -0.26
RETREG3-205ENST00000586870 FAM74A4Q5TZK3 123 aa13.42□□□□□ -0.26
RETREG3-205ENST00000586870 SPXQ9BT56 116 aa13.42□□□□□ -0.26
RETREG3-205ENST00000586870 SNHG12Q9BXW3 62 aa13.42□□□□□ -0.26
RETREG3-205ENST00000586870 VCYO14598 125 aa13.42□□□□□ -0.26
RETREG3-205ENST00000586870 PRSS1P07477 247 aa13.42□□□□□ -0.26
RETREG3-205ENST00000586870 G0S2P27469 103 aa13.42□□□□□ -0.26
RETREG3-205ENST00000586870 ZNF56Q15929 161 aa13.42□□□□□ -0.26
RETREG3-205ENST00000586870 SORL1Q92673 2214 aa13.41□□□□□ -0.26
RETREG3-205ENST00000586870 TOMM6Q96B49 74 aa13.41□□□□□ -0.26
RETREG3-205ENST00000586870 LINC01549A6NIU2 74 aa13.4□□□□□ -0.26
RETREG3-205ENST00000586870 A8MWV9 139 aa13.4□□□□□ -0.26
RETREG3-205ENST00000586870 M0QY20 66 aa13.4□□□□□ -0.26
RETREG3-205ENST00000586870 EREGO14944 169 aa13.4□□□□□ -0.26
RETREG3-205ENST00000586870 B9D2Q9BPU9 175 aa13.4□□□□□ -0.26
RETREG3-205ENST00000586870 MRPS16Q9Y3D3 137 aaKnown RBP13.4□□□□□ -0.26
RETREG3-205ENST00000586870 ODF1Q14990 250 aa13.39□□□□□ -0.27
RETREG3-205ENST00000586870 ZMAT4Q9H898 229 aa13.39□□□□□ -0.27
RETREG3-205ENST00000586870 EDA2RQ9HAV5 297 aa13.39□□□□□ -0.27
RETREG3-205ENST00000586870 XCL2Q9UBD3 114 aa13.39□□□□□ -0.27
RETREG3-205ENST00000586870 PRKDCP78527 4128 aaKnown RBP13.39□□□□□ -0.27
RETREG3-205ENST00000586870 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.39□□□□□ -0.27
RETREG3-205ENST00000586870 C11orf72Q8NBR9 251 aa13.39□□□□□ -0.27
RETREG3-205ENST00000586870 WFDC10AQ9H1F0 79 aa13.39□□□□□ -0.27
RETREG3-205ENST00000586870 DNAH3Q8TD57 4116 aa13.38□□□□□ -0.27
RETREG3-205ENST00000586870 TRBV27A0A0K0K1C4 114 aa13.38□□□□□ -0.27
RETREG3-205ENST00000586870 H7C1H1 209 aa13.38□□□□□ -0.27
RETREG3-205ENST00000586870 SLC25A34Q6PIV7 304 aa13.38□□□□□ -0.27
RETREG3-205ENST00000586870 C1orf158Q8N1D5 194 aa13.38□□□□□ -0.27
RETREG3-205ENST00000586870 SCGB3A1Q96QR1 104 aa13.38□□□□□ -0.27
RETREG3-205ENST00000586870 KIR2DL4Q99706 377 aa13.38□□□□□ -0.27
RETREG3-205ENST00000586870 TMEM208Q9BTX3 173 aa13.38□□□□□ -0.27
RETREG3-205ENST00000586870 C19orf73Q9NVV2 129 aa13.38□□□□□ -0.27
RETREG3-205ENST00000586870 DKK2Q9UBU2 259 aa13.38□□□□□ -0.27
RETREG3-205ENST00000586870 SDHAF1A6NFY7 115 aa13.37□□□□□ -0.27
RETREG3-205ENST00000586870 A8MZ25 164 aa13.37□□□□□ -0.27
RETREG3-205ENST00000586870 MORN3Q6PF18 240 aaPredicted RBP13.37□□□□□ -0.27
RETREG3-205ENST00000586870 C2orf66Q6UXQ4 117 aa13.37□□□□□ -0.27
RETREG3-205ENST00000586870 TGP01266 2768 aa13.36□□□□□ -0.27
RETREG3-205ENST00000586870 TRAV12-1A0A0B4J245 112 aa13.35□□□□□ -0.27
RETREG3-205ENST00000586870 PRM2P04554 102 aa13.35□□□□□ -0.27
RETREG3-205ENST00000586870 ZFP2Q6ZN57 461 aa13.35□□□□□ -0.27
RETREG3-205ENST00000586870 A0A087WX48 190 aa13.35□□□□□ -0.27
RETREG3-205ENST00000586870 DPM2O94777 84 aa13.35□□□□□ -0.27
RETREG3-205ENST00000586870 COX8AP10176 69 aa13.35□□□□□ -0.27
RETREG3-205ENST00000586870 UFSP1Q6NVU6 142 aa13.35□□□□□ -0.27
RETREG3-205ENST00000586870 NEGR1Q7Z3B1 354 aa13.35□□□□□ -0.27
RETREG3-205ENST00000586870 CYSLTR1Q9Y271 337 aa13.35□□□□□ -0.27
RETREG3-205ENST00000586870 RHODO00212 210 aa13.34□□□□□ -0.27
RETREG3-205ENST00000586870 IGKCP01834 107 aa13.34□□□□□ -0.27
RETREG3-205ENST00000586870 NHLRC4P0CG21 123 aaPredicted RBP13.34□□□□□ -0.27
RETREG3-205ENST00000586870 ANKRD39Q53RE8 183 aa13.34□□□□□ -0.27
RETREG3-205ENST00000586870 ERASQ7Z444 233 aa13.34□□□□□ -0.27
RETREG3-205ENST00000586870 SBSPONQ8IVN8 264 aa13.33□□□□□ -0.28
RETREG3-205ENST00000586870 RS1O15537 224 aa13.32□□□□□ -0.28
RETREG3-205ENST00000586870 RHOHQ15669 191 aa13.32□□□□□ -0.28
RETREG3-205ENST00000586870 CFAP126Q5VTH2 177 aa13.32□□□□□ -0.28
RETREG3-205ENST00000586870 STPG4Q8N801 248 aa13.32□□□□□ -0.28
RETREG3-205ENST00000586870 IL17DQ8TAD2 202 aa13.32□□□□□ -0.28
RETREG3-205ENST00000586870 C1QTNF4Q9BXJ3 329 aa13.32□□□□□ -0.28
RETREG3-205ENST00000586870 AZU1P20160 251 aa13.31□□□□□ -0.28
RETREG3-205ENST00000586870 IGHV3OR16-12A0A075B7B8 117 aa13.31□□□□□ -0.28
RETREG3-205ENST00000586870 I3L3M4 83 aa13.31□□□□□ -0.28
RETREG3-205ENST00000586870 NEXN-AS1Q8NBZ9 246 aa13.31□□□□□ -0.28
RETREG3-205ENST00000586870 MRPL16Q9NX20 251 aaKnown RBP13.31□□□□□ -0.28
RETREG3-205ENST00000586870 MRPL35Q9NZE8 188 aaKnown RBP13.31□□□□□ -0.28
RETREG3-205ENST00000586870 HHLA3Q9XRX5 114 aa13.31□□□□□ -0.28
RETREG3-205ENST00000586870 GIG44P09565 113 aaPredicted RBP13.3□□□□□ -0.28
RETREG3-205ENST00000586870 RNASE8Q8TDE3 154 aaKnown RBP13.3□□□□□ -0.28
RETREG3-205ENST00000586870 TMEM263Q8WUH6 116 aaKnown RBP13.3□□□□□ -0.28
RETREG3-205ENST00000586870 TMEM141Q96I45 108 aa13.3□□□□□ -0.28
RETREG3-205ENST00000586870 F8VRH5 84 aa13.29□□□□□ -0.28
RETREG3-205ENST00000586870 RPL35AP18077 110 aaKnown RBP13.29□□□□□ -0.28
RETREG3-205ENST00000586870 PLNP26678 52 aa13.29□□□□□ -0.28
RETREG3-205ENST00000586870 BAALCQ8WXS3 180 aa13.29□□□□□ -0.28
RETREG3-205ENST00000586870 TP53TG1Q9Y2A0 90 aa13.29□□□□□ -0.28
RETREG3-205ENST00000586870 IGHV3-73A0A0B4J1V6 119 aa13.28□□□□□ -0.28
RETREG3-205ENST00000586870 A0A1B0GV90 55 aa13.28□□□□□ -0.28
RETREG3-205ENST00000586870 DLEU1O43261 78 aa13.28□□□□□ -0.28
RETREG3-205ENST00000586870 APOC4P55056 127 aa13.28□□□□□ -0.28
RETREG3-205ENST00000586870 BATFQ16520 125 aa13.28□□□□□ -0.28
RETREG3-205ENST00000586870 TIMM17AQ99595 171 aa13.28□□□□□ -0.28
RETREG3-205ENST00000586870 CHTOPQ9Y3Y2 248 aaKnown RBP13.28□□□□□ -0.28
RETREG3-205ENST00000586870 IGIPA6NJ69 53 aa13.28□□□□□ -0.28
RETREG3-205ENST00000586870 TSHBP01222 138 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms