RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 FAM74A4Q5TZK3 123 aa8.25□□□□□ -1.09
LIG3-204ENST00000585740 SCGB3A1Q96QR1 104 aa8.25□□□□□ -1.09
LIG3-204ENST00000585740 JPT2Q9H910 190 aa8.25□□□□□ -1.09
LIG3-204ENST00000585740 WNK1Q9H4A3 2382 aa8.25□□□□□ -1.09
LIG3-204ENST00000585740 A0A087WX48 190 aa8.24□□□□□ -1.09
LIG3-204ENST00000585740 RHODO00212 210 aa8.24□□□□□ -1.09
LIG3-204ENST00000585740 DPM2O94777 84 aa8.24□□□□□ -1.09
LIG3-204ENST00000585740 IGKCP01834 107 aa8.24□□□□□ -1.09
LIG3-204ENST00000585740 RHOHQ15669 191 aa8.24□□□□□ -1.09
LIG3-204ENST00000585740 HIST2H2BDQ6DRA6 164 aa8.24□□□□□ -1.09
LIG3-204ENST00000585740 CYSLTR1Q9Y271 337 aa8.24□□□□□ -1.09
LIG3-204ENST00000585740 TRBV27A0A0K0K1C4 114 aa8.23□□□□□ -1.09
LIG3-204ENST00000585740 SDHAF1A6NFY7 115 aa8.23□□□□□ -1.09
LIG3-204ENST00000585740 M0QY20 66 aa8.23□□□□□ -1.09
LIG3-204ENST00000585740 DLEU1O43261 78 aa8.23□□□□□ -1.09
LIG3-204ENST00000585740 PF4P02776 101 aa8.23□□□□□ -1.09
LIG3-204ENST00000585740 BEAN1Q3B7T3 259 aa8.23□□□□□ -1.09
LIG3-204ENST00000585740 COL5A1-AS1Q5SY13 56 aa8.23□□□□□ -1.09
LIG3-204ENST00000585740 C2orf66Q6UXQ4 117 aa8.23□□□□□ -1.09
LIG3-204ENST00000585740 TMEM208Q9BTX3 173 aa8.23□□□□□ -1.09
LIG3-204ENST00000585740 DKK2Q9UBU2 259 aa8.23□□□□□ -1.09
LIG3-204ENST00000585740 PLNP26678 52 aa8.22□□□□□ -1.09
LIG3-204ENST00000585740 MORN3Q6PF18 240 aaPredicted RBP8.22□□□□□ -1.09
LIG3-204ENST00000585740 ERASQ7Z444 233 aa8.22□□□□□ -1.09
LIG3-204ENST00000585740 C11orf72Q8NBR9 251 aa8.22□□□□□ -1.09
LIG3-204ENST00000585740 TMEM141Q96I45 108 aa8.22□□□□□ -1.09
LIG3-204ENST00000585740 C1QTNF4Q9BXJ3 329 aa8.22□□□□□ -1.09
LIG3-204ENST00000585740 F8VRH5 84 aa8.21□□□□□ -1.1
LIG3-204ENST00000585740 SIVA1O15304 175 aa8.21□□□□□ -1.1
LIG3-204ENST00000585740 HTN1P15515 57 aa8.21□□□□□ -1.1
LIG3-204ENST00000585740 ANKRD39Q53RE8 183 aa8.21□□□□□ -1.1
LIG3-204ENST00000585740 ZFP2Q6ZN57 461 aa8.21□□□□□ -1.1
LIG3-204ENST00000585740 XCL2Q9UBD3 114 aa8.21□□□□□ -1.1
LIG3-204ENST00000585740 A0A1B0GV90 55 aa8.2□□□□□ -1.1
LIG3-204ENST00000585740 I3L3M4 83 aa8.2□□□□□ -1.1
LIG3-204ENST00000585740 RS1O15537 224 aa8.2□□□□□ -1.1
LIG3-204ENST00000585740 INSL3P51460 131 aa8.2□□□□□ -1.1
LIG3-204ENST00000585740 BATFQ16520 125 aa8.2□□□□□ -1.1
LIG3-204ENST00000585740 PAPPA-AS1Q5QFB9 102 aa8.2□□□□□ -1.1
LIG3-204ENST00000585740 C12orf54Q6X4T0 127 aa8.2□□□□□ -1.1
LIG3-204ENST00000585740 BOD1L2Q8IYS8 172 aa8.2□□□□□ -1.1
LIG3-204ENST00000585740 DNAJC30Q96LL9 226 aa8.2□□□□□ -1.1
LIG3-204ENST00000585740 TIMM17AQ99595 171 aa8.2□□□□□ -1.1
LIG3-204ENST00000585740 CHTOPQ9Y3Y2 248 aaKnown RBP8.2□□□□□ -1.1
LIG3-204ENST00000585740 UFSP1Q6NVU6 142 aa8.19□□□□□ -1.1
LIG3-204ENST00000585740 C1orf158Q8N1D5 194 aa8.19□□□□□ -1.1
LIG3-204ENST00000585740 STPG4Q8N801 248 aa8.19□□□□□ -1.1
LIG3-204ENST00000585740 LINC00482Q8N8I6 264 aa8.19□□□□□ -1.1
LIG3-204ENST00000585740 NEXN-AS1Q8NBZ9 246 aa8.19□□□□□ -1.1
LIG3-204ENST00000585740 MRPL35Q9NZE8 188 aaKnown RBP8.19□□□□□ -1.1
LIG3-204ENST00000585740 TP53TG1Q9Y2A0 90 aa8.19□□□□□ -1.1
LIG3-204ENST00000585740 NACAE9PAV3 2078 aa8.18□□□□□ -1.1
LIG3-204ENST00000585740 MEGF8Q7Z7M0 2845 aa8.18□□□□□ -1.1
LIG3-204ENST00000585740 FGF6P10767 208 aa8.18□□□□□ -1.1
LIG3-204ENST00000585740 KRTAP10-3P60369 221 aa8.18□□□□□ -1.1
LIG3-204ENST00000585740 CFAP126Q5VTH2 177 aa8.18□□□□□ -1.1
LIG3-204ENST00000585740 NEGR1Q7Z3B1 354 aa8.18□□□□□ -1.1
LIG3-204ENST00000585740 IL17DQ8TAD2 202 aa8.18□□□□□ -1.1
LIG3-204ENST00000585740 TMEM263Q8WUH6 116 aaKnown RBP8.18□□□□□ -1.1
LIG3-204ENST00000585740 BAALCQ8WXS3 180 aa8.18□□□□□ -1.1
LIG3-204ENST00000585740 C19orf73Q9NVV2 129 aa8.18□□□□□ -1.1
LIG3-204ENST00000585740 HHLA3Q9XRX5 114 aa8.18□□□□□ -1.1
LIG3-204ENST00000585740 TNFRSF18Q9Y5U5 241 aa8.18□□□□□ -1.1
LIG3-204ENST00000585740 IGHV3-53P01767 116 aa8.17□□□□□ -1.1
LIG3-204ENST00000585740 HINT1P49773 126 aaPredicted RBP8.17□□□□□ -1.1
LIG3-204ENST00000585740 TMEM97Q5BJF2 176 aa8.17□□□□□ -1.1
LIG3-204ENST00000585740 C9orf66Q5T8R8 295 aa8.17□□□□□ -1.1
LIG3-204ENST00000585740 ZC2HC1BQ5TFG8 222 aa8.17□□□□□ -1.1
LIG3-204ENST00000585740 PRSS29PA6NIE9 313 aa8.16□□□□□ -1.1
LIG3-204ENST00000585740 IGIPA6NJ69 53 aa8.16□□□□□ -1.1
LIG3-204ENST00000585740 CIDEAO60543 219 aa8.16□□□□□ -1.1
LIG3-204ENST00000585740 TSHBP01222 138 aa8.16□□□□□ -1.1
LIG3-204ENST00000585740 NPSP0C0P6 89 aa8.16□□□□□ -1.1
LIG3-204ENST00000585740 NMUP48645 174 aa8.16□□□□□ -1.1
LIG3-204ENST00000585740 PMVKQ15126 192 aa8.16□□□□□ -1.1
LIG3-204ENST00000585740 RNASE8Q8TDE3 154 aaKnown RBP8.16□□□□□ -1.1
LIG3-204ENST00000585740 C16orf74Q96GX8 76 aa8.16□□□□□ -1.1
LIG3-204ENST00000585740 KRTAP3-3Q9BYR6 98 aa8.16□□□□□ -1.1
LIG3-204ENST00000585740 KRTAP3-2Q9BYR7 98 aa8.16□□□□□ -1.1
LIG3-204ENST00000585740 MRPL16Q9NX20 251 aaKnown RBP8.16□□□□□ -1.1
LIG3-204ENST00000585740 IGHV3OR16-12A0A075B7B8 117 aa8.15□□□□□ -1.1
LIG3-204ENST00000585740 HSD52Q0P140 79 aa8.15□□□□□ -1.1
LIG3-204ENST00000585740 DAZ2Q13117 558 aaKnown RBP8.15□□□□□ -1.1
LIG3-204ENST00000585740 C2orf91Q6ZV80 131 aa8.15□□□□□ -1.1
LIG3-204ENST00000585740 GTSCR1Q86UQ5 136 aa8.15□□□□□ -1.1
LIG3-204ENST00000585740 C20orf203Q8NBC4 194 aa8.15□□□□□ -1.1
LIG3-204ENST00000585740 HIGD1BQ9P298 99 aa8.15□□□□□ -1.1
LIG3-204ENST00000585740 TRGV1A0A0A0MS02 117 aa8.14□□□□□ -1.11
LIG3-204ENST00000585740 IGHV3-73A0A0B4J1V6 119 aa8.14□□□□□ -1.11
LIG3-204ENST00000585740 TRAV4A0A0B4J268 109 aa8.14□□□□□ -1.11
LIG3-204ENST00000585740 PRM2P04554 102 aa8.14□□□□□ -1.11
LIG3-204ENST00000585740 AZU1P20160 251 aa8.14□□□□□ -1.11
LIG3-204ENST00000585740 CRYBA4P53673 196 aa8.14□□□□□ -1.11
LIG3-204ENST00000585740 HERVK_113P61574 105 aa8.14□□□□□ -1.11
LIG3-204ENST00000585740 MPV17L2Q567V2 206 aa8.14□□□□□ -1.11
LIG3-204ENST00000585740 BVES-AS1Q5T3Y7 98 aa8.14□□□□□ -1.11
LIG3-204ENST00000585740 OR4C5Q8NGB2 326 aa8.14□□□□□ -1.11
LIG3-204ENST00000585740 TRBV10-1A0A0K0K1A3 114 aa8.13□□□□□ -1.11
LIG3-204ENST00000585740 GIG44P09565 113 aaPredicted RBP8.13□□□□□ -1.11
LIG3-204ENST00000585740 RPL35AP18077 110 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms