RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 C3orf79P0CE67 100 aa7.79□□□□□ -1.16
TOP3A-216ENST00000583804 KRTDAPP60985 99 aa7.79□□□□□ -1.16
TOP3A-216ENST00000583804 LGALS9BQ3B8N2 356 aa7.79□□□□□ -1.16
TOP3A-216ENST00000583804 MIEN1Q9BRT3 115 aa7.79□□□□□ -1.16
TOP3A-216ENST00000583804 TRAV26-2A0A0B4J265 109 aa7.78□□□□□ -1.16
TOP3A-216ENST00000583804 NCR2O95944 276 aa7.78□□□□□ -1.16
TOP3A-216ENST00000583804 PMCHL1Q16048 86 aa7.78□□□□□ -1.16
TOP3A-216ENST00000583804 LINC00469Q8N7U9 141 aa7.78□□□□□ -1.16
TOP3A-216ENST00000583804 M0R143 59 aa7.77□□□□□ -1.17
TOP3A-216ENST00000583804 HTN3P15516 51 aa7.77□□□□□ -1.17
TOP3A-216ENST00000583804 Q6ZTC4 211 aa7.77□□□□□ -1.17
TOP3A-216ENST00000583804 RASL10AQ92737 203 aa7.77□□□□□ -1.17
TOP3A-216ENST00000583804 URB1-AS1Q96HZ7 61 aa7.77□□□□□ -1.17
TOP3A-216ENST00000583804 AP1S3Q96PC3 154 aa7.77□□□□□ -1.17
TOP3A-216ENST00000583804 CNFNQ9BYD5 112 aa7.77□□□□□ -1.17
TOP3A-216ENST00000583804 C20orf202A1L168 122 aa7.76□□□□□ -1.17
TOP3A-216ENST00000583804 NXPH4O95158 308 aa7.76□□□□□ -1.17
TOP3A-216ENST00000583804 GAS8-AS1O95177 125 aa7.76□□□□□ -1.17
TOP3A-216ENST00000583804 SMIM17P0DL12 118 aa7.76□□□□□ -1.17
TOP3A-216ENST00000583804 ZNF56Q15929 161 aa7.76□□□□□ -1.17
TOP3A-216ENST00000583804 RNASEKQ6P5S7 137 aaKnown RBP7.76□□□□□ -1.17
TOP3A-216ENST00000583804 SMIM15Q7Z3B0 74 aa7.76□□□□□ -1.17
TOP3A-216ENST00000583804 FAM19A2Q8N3H0 131 aa7.76□□□□□ -1.17
TOP3A-216ENST00000583804 LINC00612Q8N6U2 182 aa7.76□□□□□ -1.17
TOP3A-216ENST00000583804 WWC2-AS2Q96NR7 200 aa7.76□□□□□ -1.17
TOP3A-216ENST00000583804 IGHV4-4A0A075B6R2 117 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 F5H697 171 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 EREGO14944 169 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 GATA1P15976 413 aaPredicted RBP7.75□□□□□ -1.17
TOP3A-216ENST00000583804 BTF3P20290 206 aaKnown RBP7.75□□□□□ -1.17
TOP3A-216ENST00000583804 OR4C5Q8NGB2 326 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 PTH2Q96A98 100 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 RNF185Q96GF1 192 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 SNHG12Q9BXW3 62 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 PAM16Q9Y3D7 125 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 A0A1B0GV90 55 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 F5H768 121 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 ATP5G1P05496 136 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 MRPL51Q4U2R6 128 aaKnown RBP7.75□□□□□ -1.17
TOP3A-216ENST00000583804 ZNF479Q96JC4 524 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 TMEM191AQ9H0A3 160 aa7.75□□□□□ -1.17
TOP3A-216ENST00000583804 DEFB131BA0A096LNP1 70 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 TRAV10A0A0B4J240 114 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 TRAV4A0A0B4J268 109 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 A8MWV9 139 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 D6R8Y8 96 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 RS1O15537 224 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 LINC00614P0C842 121 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 SPATA45Q537H7 98 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 PIK3CD-AS1Q5SR53 167 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 CFAP126Q5VTH2 177 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 FAM104BQ5XKR9 115 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 POM121L12Q8N7R1 296 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 PHLDA1Q8WV24 401 aaPredicted RBP7.74□□□□□ -1.17
TOP3A-216ENST00000583804 C18orf15Q96N68 181 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 DPH3P1Q9H4G8 78 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 UQCR10Q9UDW1 63 aa7.74□□□□□ -1.17
TOP3A-216ENST00000583804 TRGV4A0A0C4DH28 118 aa7.73□□□□□ -1.17
TOP3A-216ENST00000583804 IGHV1-24A0A0C4DH33 117 aa7.73□□□□□ -1.17
TOP3A-216ENST00000583804 CRYGDP07320 174 aa7.73□□□□□ -1.17
TOP3A-216ENST00000583804 P0DMU3 169 aa7.73□□□□□ -1.17
TOP3A-216ENST00000583804 FAM231AP0DMU4 169 aa7.73□□□□□ -1.17
TOP3A-216ENST00000583804 FAM231CP0DMU5 169 aa7.73□□□□□ -1.17
TOP3A-216ENST00000583804 SUMO4Q6EEV6 95 aa7.73□□□□□ -1.17
TOP3A-216ENST00000583804 ZFAND6Q6FIF0 208 aa7.73□□□□□ -1.17
TOP3A-216ENST00000583804 Q6ZSN1 163 aa7.73□□□□□ -1.17
TOP3A-216ENST00000583804 MUC7Q8TAX7 377 aa7.73□□□□□ -1.17
TOP3A-216ENST00000583804 DEFB104AQ8WTQ1 72 aa7.73□□□□□ -1.17
TOP3A-216ENST00000583804 RPL39LQ96EH5 51 aaKnown RBP7.73□□□□□ -1.17
TOP3A-216ENST00000583804 TMEM70Q9BUB7 260 aa7.73□□□□□ -1.17
TOP3A-216ENST00000583804 TRAV9-2A0A087WT02 112 aa7.72□□□□□ -1.17
TOP3A-216ENST00000583804 IGLC3P0DOY3 106 aa7.72□□□□□ -1.17
TOP3A-216ENST00000583804 CKS2P33552 79 aa7.72□□□□□ -1.17
TOP3A-216ENST00000583804 KIF25-AS1Q9Y6Z4 181 aa7.72□□□□□ -1.17
TOP3A-216ENST00000583804 NACAE9PAV3 2078 aa7.71□□□□□ -1.17
TOP3A-216ENST00000583804 LEPROTL1O95214 131 aa7.71□□□□□ -1.18
TOP3A-216ENST00000583804 LINC00315P59091 139 aa7.71□□□□□ -1.18
TOP3A-216ENST00000583804 LOC389332A0A1B0GUA5 103 aa7.7□□□□□ -1.18
TOP3A-216ENST00000583804 SYS1-DBNDD2H3BUS1 97 aa7.7□□□□□ -1.18
TOP3A-216ENST00000583804 NPYP01303 97 aa7.7□□□□□ -1.18
TOP3A-216ENST00000583804 FHL2Q14192 279 aa7.7□□□□□ -1.18
TOP3A-216ENST00000583804 CEMP1Q6PRD7 247 aaPredicted RBP7.7□□□□□ -1.18
TOP3A-216ENST00000583804 PET117Q6UWS5 81 aa7.7□□□□□ -1.18
TOP3A-216ENST00000583804 Q9UF83 564 aa7.7□□□□□ -1.18
TOP3A-216ENST00000583804 HSPB8Q9UJY1 196 aa7.7□□□□□ -1.18
TOP3A-216ENST00000583804 HHLA3Q9XRX5 114 aa7.7□□□□□ -1.18
TOP3A-216ENST00000583804 TRAV26-1A0A087WT03 109 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 A0A0J9YY99 117 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 LOC100131303A0A0U1RQF7 123 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 NUPR2A6NF83 97 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 IGLL5B9A064 214 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 RHODO00212 210 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 CIDEAO60543 219 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 UFSP1Q6NVU6 142 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 ZFP2Q6ZN57 461 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 NEGR1Q7Z3B1 354 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 SPATA12Q7Z6I5 190 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 ORMDL3Q8N138 153 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 PRELID3AQ96N28 172 aa7.69□□□□□ -1.18
TOP3A-216ENST00000583804 AP5S1Q9NUS5 200 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms