RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 LINC00173Q6ZV60 143 aa3.72□□□□□ -1.81
NUP85-221ENST00000583548 ZFP82Q8N141 532 aa3.72□□□□□ -1.81
NUP85-221ENST00000583548 LINC00337Q8N6G1 96 aa3.72□□□□□ -1.81
NUP85-221ENST00000583548 MCFD2Q8NI22 146 aa3.72□□□□□ -1.81
NUP85-221ENST00000583548 TYMSOSQ8TAI1 123 aa3.72□□□□□ -1.81
NUP85-221ENST00000583548 ISOC2Q96AB3 205 aa3.72□□□□□ -1.81
NUP85-221ENST00000583548 RETNLBQ9BQ08 111 aa3.72□□□□□ -1.81
NUP85-221ENST00000583548 NPCDR1Q9BY65 106 aa3.72□□□□□ -1.81
NUP85-221ENST00000583548 NAA50Q9GZZ1 169 aaKnown RBP3.72□□□□□ -1.81
NUP85-221ENST00000583548 VCX3AQ9NNX9 186 aa3.72□□□□□ -1.81
NUP85-221ENST00000583548 GSKIPQ9P0R6 139 aa3.72□□□□□ -1.81
NUP85-221ENST00000583548 IGLV4-60A0A075B6I1 120 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 IGKV3D-20A0A0C4DH25 116 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 IGHV1-58A0A0C4DH39 117 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 FABP5P3A8MUU1 101 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 ZNF561-AS1K7EIQ3 104 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 RGS5O15539 181 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 ARMS2P0C7Q2 107 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 PVALBP20472 110 aaPredicted RBP3.71□□□□□ -1.82
NUP85-221ENST00000583548 SULT1A1P50225 295 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 AP3S2P59780 193 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 PHF5AQ7RTV0 110 aaKnown RBP3.71□□□□□ -1.82
NUP85-221ENST00000583548 STX12Q86Y82 276 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 OR5C1Q8NGR4 320 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 TMEM243Q9BU79 118 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 MED28Q9H204 178 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 PPDPFQ9H3Y8 114 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 Q9H521 79 aa3.71□□□□□ -1.82
NUP85-221ENST00000583548 C9orf170A2RU37 121 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 B4DEV8 164 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 H3BMQ9 156 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 M0R381 172 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 UBE2L6O14933 153 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 MBPP02686 304 aaPredicted RBP3.7□□□□□ -1.82
NUP85-221ENST00000583548 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
NUP85-221ENST00000583548 VBP1P61758 197 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 NCS1P62166 190 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 MT1HP80294 61 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 FLI1Q01543 452 aaPredicted RBP3.7□□□□□ -1.82
NUP85-221ENST00000583548 PRNTQ86SH4 94 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 DEDD2Q8WXF8 326 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 CHCHD10Q8WYQ3 142 aaPredicted RBP3.7□□□□□ -1.82
NUP85-221ENST00000583548 MBD2Q9UBB5 411 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 RSL24D1Q9UHA3 163 aaKnown RBP3.7□□□□□ -1.82
NUP85-221ENST00000583548 FLVCR2Q9UPI3 526 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 PSG8Q9UQ74 426 aa3.7□□□□□ -1.82
NUP85-221ENST00000583548 TRAV34A0A0B4J273 112 aa3.69□□□□□ -1.82
NUP85-221ENST00000583548 C17orf112F2Z3M2 114 aa3.69□□□□□ -1.82
NUP85-221ENST00000583548 APOMO95445 188 aa3.69□□□□□ -1.82
NUP85-221ENST00000583548 PQLC2Q6ZP29 291 aa3.69□□□□□ -1.82
NUP85-221ENST00000583548 C5orf17Q8NAS9 161 aa3.69□□□□□ -1.82
NUP85-221ENST00000583548 SGK494Q96LW2 274 aa3.69□□□□□ -1.82
NUP85-221ENST00000583548 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
NUP85-221ENST00000583548 IGLV4-69A0A075B6H9 119 aa3.68□□□□□ -1.82
NUP85-221ENST00000583548 IGKV3OR2-268A0A0C4DH90 116 aa3.68□□□□□ -1.82
NUP85-221ENST00000583548 F5H697 171 aa3.68□□□□□ -1.82
NUP85-221ENST00000583548 TCRAP04437 139 aa3.68□□□□□ -1.82
NUP85-221ENST00000583548 CAMPP49913 170 aa3.68□□□□□ -1.82
NUP85-221ENST00000583548 GNG5P63218 68 aa3.68□□□□□ -1.82
NUP85-221ENST00000583548 SSBP4Q9BWG4 385 aaPredicted RBP3.68□□□□□ -1.82
NUP85-221ENST00000583548 LSM5Q9Y4Y9 91 aaKnown RBP3.68□□□□□ -1.82
NUP85-221ENST00000583548 A0A1B0GVG6 124 aa3.67□□□□□ -1.82
NUP85-221ENST00000583548 KRBOX1C9JBD0 128 aa3.67□□□□□ -1.82
NUP85-221ENST00000583548 ZNF861PO60384 105 aa3.67□□□□□ -1.82
NUP85-221ENST00000583548 TSHBP01222 138 aa3.67□□□□□ -1.82
NUP85-221ENST00000583548 TMBIM6P55061 237 aa3.67□□□□□ -1.82
NUP85-221ENST00000583548 RPL18AQ02543 176 aaKnown RBP3.67□□□□□ -1.82
NUP85-221ENST00000583548 FOXI1Q12951 378 aa3.67□□□□□ -1.82
NUP85-221ENST00000583548 FP248Q71RG6 208 aaPredicted RBP3.67□□□□□ -1.82
NUP85-221ENST00000583548 TMEM252Q8N6L7 170 aa3.67□□□□□ -1.82
NUP85-221ENST00000583548 LINC00304Q8N9R0 145 aa3.67□□□□□ -1.82
NUP85-221ENST00000583548 PGLYRP4Q96LB8 373 aa3.67□□□□□ -1.82
NUP85-221ENST00000583548 KRTAP4-1Q9BYQ7 146 aa3.67□□□□□ -1.82
NUP85-221ENST00000583548 SCO2A0A1W2PP80 73 aa3.66□□□□□ -1.82
NUP85-221ENST00000583548 A6NHS1 94 aa3.66□□□□□ -1.82
NUP85-221ENST00000583548 M0R036 132 aa3.66□□□□□ -1.82
NUP85-221ENST00000583548 SMIM17P0DL12 118 aa3.66□□□□□ -1.82
NUP85-221ENST00000583548 BCL2P10415 239 aa3.66□□□□□ -1.82
NUP85-221ENST00000583548 UBE2BP63146 152 aa3.66□□□□□ -1.82
NUP85-221ENST00000583548 TOMM5Q8N4H5 51 aa3.66□□□□□ -1.82
NUP85-221ENST00000583548 THAP6Q8TBB0 222 aa3.66□□□□□ -1.82
NUP85-221ENST00000583548 LINC00526Q96FQ7 95 aa3.66□□□□□ -1.82
NUP85-221ENST00000583548 SDHCQ99643 169 aaPredicted RBP3.66□□□□□ -1.82
NUP85-221ENST00000583548 FUNDC2Q9BWH2 189 aa3.66□□□□□ -1.82
NUP85-221ENST00000583548 ZNF471Q9BX82 626 aaPredicted RBP3.66□□□□□ -1.82
NUP85-221ENST00000583548 A0A087X002 238 aa3.65□□□□□ -1.83
NUP85-221ENST00000583548 IGSF23A1L1A6 192 aa3.65□□□□□ -1.83
NUP85-221ENST00000583548 GRIFINA4D1Z8 144 aa3.65□□□□□ -1.83
NUP85-221ENST00000583548 M0R2T5 61 aa3.65□□□□□ -1.83
NUP85-221ENST00000583548 CTDSP2O14595 271 aa3.65□□□□□ -1.83
NUP85-221ENST00000583548 AMMECR1LQ6DCA0 310 aa3.65□□□□□ -1.83
NUP85-221ENST00000583548 NUP35Q8NFH5 326 aa3.65□□□□□ -1.83
NUP85-221ENST00000583548 CAMK2N2Q96S95 79 aa3.65□□□□□ -1.83
NUP85-221ENST00000583548 WDR61Q9GZS3 305 aaKnown RBP3.65□□□□□ -1.83
NUP85-221ENST00000583548 C11orf1Q9H5F2 150 aa3.65□□□□□ -1.83
NUP85-221ENST00000583548 A0A1W2PPV4 95 aa3.64□□□□□ -1.83
NUP85-221ENST00000583548 C19orf71A6NCJ1 209 aa3.64□□□□□ -1.83
NUP85-221ENST00000583548 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.64□□□□□ -1.83
NUP85-221ENST00000583548 RPL12P30050 165 aaKnown RBP3.64□□□□□ -1.83
NUP85-221ENST00000583548 XCL1P47992 114 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms