RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 SLC35E3Q7Z769 313 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 DEFB125Q8N687 156 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 LINC00337Q8N6G1 96 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 TCTEX1D1Q8N7M0 179 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 OR2K2Q8NGT1 345 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 OR4X1Q8NH49 305 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 ZNRF2Q8NHG8 242 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 GRPEL2Q8TAA5 225 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 ZNF431Q8TF32 576 aaPredicted RBP1.37□□□□□ -2.19
VAPA-206ENST00000583475 S100ZQ8WXG8 99 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 TSC22D3Q99576 134 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 SLC25A21Q9BQT8 299 aaPredicted RBP1.37□□□□□ -2.19
VAPA-206ENST00000583475 GINS4Q9BRT9 223 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 GINS3Q9BRX5 216 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 PBDC1Q9BVG4 233 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 ZNF436Q9C0F3 470 aaPredicted RBP1.37□□□□□ -2.19
VAPA-206ENST00000583475 METTL1Q9UBP6 276 aaKnown RBP1.37□□□□□ -2.19
VAPA-206ENST00000583475 ZNF706Q9Y5V0 76 aaPredicted RBP1.37□□□□□ -2.19
VAPA-206ENST00000583475 PXMP4Q9Y6I8 212 aa1.37□□□□□ -2.19
VAPA-206ENST00000583475 TRAV41A0A0B4J266 112 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 DUXBA0A1W2PPF3 345 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 A8MTW9 85 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 SNRPGP15A8MWD9 76 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 INMT-MINDY4F8WBC2 141 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 H3BUA1 57 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 M0QZK8 103 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 DEDDO75618 318 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 MT-CO2P00403 227 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 IGLV1-51P01701 117 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 CRYGDP07320 174 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 LGALS1P09382 135 aaKnown RBP1.36□□□□□ -2.19
VAPA-206ENST00000583475 NBEAP1P0C6P0 100 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 ESDP10768 282 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 HRES1P13985 223 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 SRP14P37108 136 aaKnown RBP1.36□□□□□ -2.19
VAPA-206ENST00000583475 RPL27AP46776 148 aaKnown RBP1.36□□□□□ -2.19
VAPA-206ENST00000583475 INPP1P49441 399 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 CMC4P56277 68 aaPredicted RBP1.36□□□□□ -2.19
VAPA-206ENST00000583475 HSPE1P61604 102 aaKnown RBP1.36□□□□□ -2.19
VAPA-206ENST00000583475 HERVK_113P63121 156 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 RHOGP84095 191 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 ATP5G2Q06055 141 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 CATR1Q13166 79 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 FXYD3Q14802 87 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 RTL8BQ17RB0 113 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 IAH1Q2TAA2 248 aaPredicted RBP1.36□□□□□ -2.19
VAPA-206ENST00000583475 AKR1C8PQ5T2L2 129 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 SAMD13Q5VXD3 122 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 Q6ZRU5 148 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 TCF24Q7RTU0 167 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 FAM19A3Q7Z5A8 133 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 NDUFA11Q86Y39 141 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 SGPP2Q8IWX5 399 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 ORMDL3Q8N138 153 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 FAM24BQ8N5W8 94 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 ANKRD29Q8N6D5 301 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 OR4A5Q8NH83 315 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 ZNF418Q8TF45 676 aaPredicted RBP1.36□□□□□ -2.19
VAPA-206ENST00000583475 C4orf3Q8WVX3 66 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 TMEM70Q9BUB7 260 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 TMEM147Q9BVK8 224 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 COMMD5Q9GZQ3 224 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 WFDC10AQ9H1F0 79 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 GTSF1LQ9H1H1 148 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 MED28Q9H204 178 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 SPANXA1Q9NS26 97 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 LYRM2Q9NU23 88 aaPredicted RBP1.36□□□□□ -2.19
VAPA-206ENST00000583475 MRPL27Q9P0M9 148 aaKnown RBP1.36□□□□□ -2.19
VAPA-206ENST00000583475 SCP2D1Q9UJQ7 156 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 DNAH8Q96JB1 4490 aa1.36□□□□□ -2.19
VAPA-206ENST00000583475 KIAA1109Q2LD37 5005 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 APOBP04114 4563 aaKnown RBP1.35□□□□□ -2.19
VAPA-206ENST00000583475 IGHV3-21A0A0B4J1V1 117 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 TRAV26-2A0A0B4J265 109 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 FAM236DA0A1B0GTK5 79 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 FAM24AA6NFZ4 105 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 KNCNA6PVL3 124 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 A8MWL6 223 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 TMEM250H0YL14 139 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.35□□□□□ -2.19
VAPA-206ENST00000583475 K7EIL1 84 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 SLC17A3O00476 420 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 ISLRO14498 428 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 SYNGR2O43760 224 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 NDUFC2O95298 119 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 MPC2O95563 127 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 CXorf1O96002 111 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 HRASP01112 189 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 IGLV2-8P01709 118 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 APOA2P02652 100 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 OR10J4P0C629 311 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 SEC11BP0C7V7 166 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 TRAPPC2P0DI81 140 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 TRAPPC2BP0DI82 140 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 FAM236CP0DP71 79 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 FGF6P10767 208 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 IAPPP10997 89 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 OR10J1P30954 320 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 BRS3P32247 399 aa1.35□□□□□ -2.19
VAPA-206ENST00000583475 DEFB1P60022 68 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms