RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 TRBV7-3A0A075B6L6 115 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 COLCA2A8K830 154 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 D6R8Y8 96 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 NCR2O95944 276 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 P0DMU3 169 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 FAM231AP0DMU4 169 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 FAM231CP0DMU5 169 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 SRIP30626 198 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 TCTAP57738 103 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 FABP9Q0Z7S8 132 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 MRPL23Q16540 153 aaKnown RBP8.66□□□□□ -1.02
CDH8-208ENST00000582980 OR10J3Q5JRS4 329 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 SH2D6Q7Z4S9 175 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.66□□□□□ -1.02
CDH8-208ENST00000582980 NEXN-AS1Q8NBZ9 246 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 LAMTOR2Q9Y2Q5 125 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 TGP01266 2768 aa8.66□□□□□ -1.02
CDH8-208ENST00000582980 LOC100131303A0A0U1RQF7 123 aa8.65□□□□□ -1.02
CDH8-208ENST00000582980 GAGE12JA6NER3 117 aa8.65□□□□□ -1.02
CDH8-208ENST00000582980 SMKR1H3BMG3 65 aa8.65□□□□□ -1.02
CDH8-208ENST00000582980 C3orf84H3BNL1 204 aa8.65□□□□□ -1.02
CDH8-208ENST00000582980 NUDT3O95989 172 aa8.65□□□□□ -1.02
CDH8-208ENST00000582980 RAB5AP20339 215 aa8.65□□□□□ -1.02
CDH8-208ENST00000582980 RPS10P46783 165 aaKnown RBP8.65□□□□□ -1.02
CDH8-208ENST00000582980 GAGE1Q13065 139 aa8.65□□□□□ -1.02
CDH8-208ENST00000582980 GAGE4Q13068 117 aa8.65□□□□□ -1.02
CDH8-208ENST00000582980 GAGE5Q13069 117 aa8.65□□□□□ -1.02
CDH8-208ENST00000582980 GAGE13Q4V321 117 aa8.65□□□□□ -1.02
CDH8-208ENST00000582980 ZFAND6Q6FIF0 208 aa8.65□□□□□ -1.02
CDH8-208ENST00000582980 ZNRF2Q8NHG8 242 aa8.65□□□□□ -1.02
CDH8-208ENST00000582980 RPL39LQ96EH5 51 aaKnown RBP8.65□□□□□ -1.02
CDH8-208ENST00000582980 TRBV6-5A0A0K0K1A5 114 aa8.64□□□□□ -1.03
CDH8-208ENST00000582980 PHOX2AO14813 284 aa8.64□□□□□ -1.03
CDH8-208ENST00000582980 PRELID3AQ96N28 172 aa8.64□□□□□ -1.03
CDH8-208ENST00000582980 ST20Q9HBF5 79 aa8.64□□□□□ -1.03
CDH8-208ENST00000582980 A0A096LPF7 62 aa8.63□□□□□ -1.03
CDH8-208ENST00000582980 LINC00694P0DN24 101 aa8.63□□□□□ -1.03
CDH8-208ENST00000582980 KIAA1644Q3SXP7 199 aa8.63□□□□□ -1.03
CDH8-208ENST00000582980 NEGR1Q7Z3B1 354 aa8.63□□□□□ -1.03
CDH8-208ENST00000582980 DAZ4Q86SG3 579 aaKnown RBP8.63□□□□□ -1.03
CDH8-208ENST00000582980 NRACQ8N912 160 aa8.63□□□□□ -1.03
CDH8-208ENST00000582980 C20orf78Q9BR46 151 aa8.63□□□□□ -1.03
CDH8-208ENST00000582980 DAZ3Q9NR90 486 aaKnown RBP8.63□□□□□ -1.03
CDH8-208ENST00000582980 GAS8-AS1O95177 125 aa8.62□□□□□ -1.03
CDH8-208ENST00000582980 TNFRSF6BO95407 300 aa8.62□□□□□ -1.03
CDH8-208ENST00000582980 UBE2D3P61077 147 aa8.62□□□□□ -1.03
CDH8-208ENST00000582980 SUMO2P61956 95 aaKnown RBP8.62□□□□□ -1.03
CDH8-208ENST00000582980 UBE2D2P62837 147 aa8.62□□□□□ -1.03
CDH8-208ENST00000582980 ATP6V0E2Q8NHE4 81 aa8.62□□□□□ -1.03
CDH8-208ENST00000582980 MAP1LC3AQ9H492 121 aa8.62□□□□□ -1.03
CDH8-208ENST00000582980 Q9UF83 564 aa8.62□□□□□ -1.03
CDH8-208ENST00000582980 SDHAF1A6NFY7 115 aa8.61□□□□□ -1.03
CDH8-208ENST00000582980 NPYP01303 97 aa8.61□□□□□ -1.03
CDH8-208ENST00000582980 APLNQ9ULZ1 77 aa8.61□□□□□ -1.03
CDH8-208ENST00000582980 DYNC2H1Q8NCM8 4307 aaKnown RBP8.61□□□□□ -1.03
CDH8-208ENST00000582980 TRGC2P03986 189 aa8.6□□□□□ -1.03
CDH8-208ENST00000582980 TMEM97Q5BJF2 176 aa8.6□□□□□ -1.03
CDH8-208ENST00000582980 CASC10Q5T4H9 136 aa8.6□□□□□ -1.03
CDH8-208ENST00000582980 ALKBH7Q9BT30 221 aaPredicted RBP8.6□□□□□ -1.03
CDH8-208ENST00000582980 TMEM70Q9BUB7 260 aa8.6□□□□□ -1.03
CDH8-208ENST00000582980 I3L3M4 83 aa8.59□□□□□ -1.03
CDH8-208ENST00000582980 VCYO14598 125 aa8.59□□□□□ -1.03
CDH8-208ENST00000582980 PMCHP20382 165 aa8.59□□□□□ -1.03
CDH8-208ENST00000582980 RPL32P62910 135 aaKnown RBP8.59□□□□□ -1.03
CDH8-208ENST00000582980 SMIM2Q9BVW6 85 aa8.59□□□□□ -1.03
CDH8-208ENST00000582980 GTSF1LQ9H1H1 148 aa8.59□□□□□ -1.03
CDH8-208ENST00000582980 IGHV3-38A0A0C4DH36 116 aa8.58□□□□□ -1.04
CDH8-208ENST00000582980 TRBV27A0A0K0K1C4 114 aa8.58□□□□□ -1.04
CDH8-208ENST00000582980 PRSS47A8MTI9 375 aa8.58□□□□□ -1.04
CDH8-208ENST00000582980 TCAPO15273 167 aa8.58□□□□□ -1.04
CDH8-208ENST00000582980 POLR2KP53803 58 aaKnown RBP8.58□□□□□ -1.04
CDH8-208ENST00000582980 CCL18P55774 89 aa8.58□□□□□ -1.04
CDH8-208ENST00000582980 TIRAPP58753 221 aa8.58□□□□□ -1.04
CDH8-208ENST00000582980 COTL1Q14019 142 aa8.58□□□□□ -1.04
CDH8-208ENST00000582980 KIR2DL4Q99706 377 aa8.58□□□□□ -1.04
CDH8-208ENST00000582980 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
CDH8-208ENST00000582980 LOC389332A0A1B0GUA5 103 aa8.57□□□□□ -1.04
CDH8-208ENST00000582980 LYPD5Q6UWN5 251 aa8.57□□□□□ -1.04
CDH8-208ENST00000582980 STARD9Q9P2P6 4700 aa8.56□□□□□ -1.04
CDH8-208ENST00000582980 TRBV6-8A0A0A6YYG3 113 aa8.56□□□□□ -1.04
CDH8-208ENST00000582980 FCER1GP30273 86 aa8.56□□□□□ -1.04
CDH8-208ENST00000582980 ESRGQ1W209 222 aa8.56□□□□□ -1.04
CDH8-208ENST00000582980 LELP1Q5T871 98 aa8.56□□□□□ -1.04
CDH8-208ENST00000582980 UBE2DNLQ8IWF7 75 aa8.56□□□□□ -1.04
CDH8-208ENST00000582980 PRSS3P2Q8NHM4 247 aa8.56□□□□□ -1.04
CDH8-208ENST00000582980 CSMD3Q7Z407 3707 aa8.56□□□□□ -1.04
CDH8-208ENST00000582980 TRBV25-1A0A075B6N4 114 aa8.55□□□□□ -1.04
CDH8-208ENST00000582980 IGHV1-24A0A0C4DH33 117 aa8.55□□□□□ -1.04
CDH8-208ENST00000582980 K7EMI3 77 aa8.55□□□□□ -1.04
CDH8-208ENST00000582980 AMTP48728 403 aa8.55□□□□□ -1.04
CDH8-208ENST00000582980 Q8N8P6 123 aa8.55□□□□□ -1.04
CDH8-208ENST00000582980 C18orf32Q8TCD1 76 aa8.55□□□□□ -1.04
CDH8-208ENST00000582980 TRAV8-6A0A0B4J262 113 aa8.54□□□□□ -1.04
CDH8-208ENST00000582980 C1orf196B1AJZ1 125 aa8.54□□□□□ -1.04
CDH8-208ENST00000582980 TSHBP01222 138 aa8.54□□□□□ -1.04
CDH8-208ENST00000582980 IFI27P40305 119 aaPredicted RBP8.54□□□□□ -1.04
CDH8-208ENST00000582980 RAB5BP61020 215 aa8.54□□□□□ -1.04
CDH8-208ENST00000582980 FA2HQ7L5A8 372 aa8.54□□□□□ -1.04
CDH8-208ENST00000582980 MRPS16Q9Y3D3 137 aaKnown RBP8.54□□□□□ -1.04
CDH8-208ENST00000582980 IGLV2-18A0A075B6J9 118 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms