RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	LINC00173	Q6ZV60	143 aa		3.09	□□□□□ -1.91
MSI2-216	ENST00000582772	GOLT1A	Q6ZVE7	132 aa		3.09	□□□□□ -1.91
MSI2-216	ENST00000582772	PRNT	Q86SH4	94 aa		3.09	□□□□□ -1.91
MSI2-216	ENST00000582772	C1orf158	Q8N1D5	194 aa		3.09	□□□□□ -1.91
MSI2-216	ENST00000582772	STXBP6	Q8NFX7	210 aa		3.09	□□□□□ -1.91
MSI2-216	ENST00000582772	ZC2HC1A	Q96GY0	325 aa		3.09	□□□□□ -1.91
MSI2-216	ENST00000582772	FMC1	Q96HJ9	113 aa		3.09	□□□□□ -1.91
MSI2-216	ENST00000582772	PGLYRP4	Q96LB8	373 aa		3.09	□□□□□ -1.91
MSI2-216	ENST00000582772	LINC00467	Q9BRT7	94 aa		3.09	□□□□□ -1.91
MSI2-216	ENST00000582772	SAMD10	Q9BYL1	202 aa		3.09	□□□□□ -1.91
MSI2-216	ENST00000582772	ZNF331	Q9NQX6	463 aa	Predicted RBP	3.09	□□□□□ -1.91
MSI2-216	ENST00000582772	PAM16	Q9Y3D7	125 aa		3.09	□□□□□ -1.91
MSI2-216	ENST00000582772	CBY3	A6NI87	242 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	NPIPB5	A8MRT5	1133 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772		A8MWL6	223 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772		M0R3E3	92 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	IGHV3-23	P01764	117 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	CHTF8	P0CG12	524 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	NTF3	P20783	257 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	CAMP	P49913	170 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	NUTF2	P61970	127 aa	Known RBP	3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	TPRXL	Q17RH7	258 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	CT83	Q5H943	113 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	ATP5L2	Q7Z4Y8	100 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	C10orf126	Q8N4M7	172 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	GATD1	Q8NB37	220 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	SMIM12	Q96EX1	92 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	C8orf49	Q96NF6	230 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	MIEN1	Q9BRT3	115 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	VAMP8	Q9BV40	100 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	PSG8	Q9UQ74	426 aa		3.08	□□□□□ -1.92
MSI2-216	ENST00000582772	TRAV26-1	A0A087WT03	109 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	FAM231B	A6NCW3	169 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772		K7EMT4	169 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772		M0R143	59 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	TCAP	O15273	167 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	IGKV2D-40	P01614	121 aa	Predicted RBP	3.07	□□□□□ -1.92
MSI2-216	ENST00000582772		P01737	135 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	IL4	P05112	153 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	ARMS2	P0C7Q2	107 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	IGLC3	P0DOY3	106 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	MFAP4	P55083	255 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	FOXA3	P55318	350 aa	Predicted RBP	3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	HBB	P68871	147 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	PMCHL1	Q16048	86 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	KLK9	Q2XQG4	91 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	SPATA45	Q537H7	98 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	RNASEK	Q6P5S7	137 aa	Known RBP	3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	ATOH7	Q8N100	152 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	TTC9C	Q8N5M4	171 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	TMEM75	Q8N9X5	138 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	OR2D3	Q8NGH3	330 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	GFRA4	Q9GZZ7	299 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	KLK9	Q9UKQ9	250 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	KIF25-AS1	Q9Y6Z4	181 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	AHNAK2	Q8IVF2	5795 aa		3.07	□□□□□ -1.92
MSI2-216	ENST00000582772	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	IGHV1-24	A0A0C4DH33	117 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	PRAC2	D3DTV9	90 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772		M0R2Z0	102 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	SH2D1A	O60880	128 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	GHRH	P01286	108 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	CTSG	P08311	255 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	G0S2	P27469	103 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	ZNF80	P51504	273 aa	Predicted RBP	3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	ZNF138	P52744	262 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	SST	P61278	116 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	PSG3	Q16557	428 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	ASB16-AS1	Q495Z4	193 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	LBH	Q53QV2	105 aa	Predicted RBP	3.06	□□□□□ -1.92
MSI2-216	ENST00000582772		Q56UQ5	140 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	IGFL4	Q6B9Z1	124 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	MRPL52	Q86TS9	123 aa	Known RBP	3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	BPIFA4P	Q86YQ2	179 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	ZNF502	Q8TBZ5	544 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	VGLL1	Q99990	258 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	CDIP1	Q9H305	208 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	C21orf62	Q9NYP8	219 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	XCL2	Q9UBD3	114 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	TP73-AS1	Q9UF72	201 aa		3.06	□□□□□ -1.92
MSI2-216	ENST00000582772	TRAV30	A0A087WSZ9	112 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	TMSB15B	A0A087X1C1	80 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772		A0A096LNJ9	63 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	IGHV3-35	A0A0C4DH35	117 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772		H7C1H1	209 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	CHEK1	O14757	476 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	GNG7	O60262	68 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	HSBP1	O75506	76 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	EVI2A	P22794	236 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	KRTAP5-9	P26371	169 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	PRR3	P79522	188 aa	Known RBP	3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	ERCC8	Q13216	396 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	COX8C	Q7Z4L0	72 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	STPG4	Q8N801	248 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772		Q8TAT8	98 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	NDFIP1	Q9BT67	221 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772	ZFP30	Q9Y2G7	519 aa		3.05	□□□□□ -1.92
MSI2-216	ENST00000582772		A0A087X0K7	114 aa		3.04	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms