RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 TRBV25-1A0A075B6N4 114 aa6.27□□□□□ -1.41
RFFL-208ENST00000581039 TRAV8-4A0A0B4J246 113 aa6.27□□□□□ -1.41
RFFL-208ENST00000581039 P01737 135 aa6.27□□□□□ -1.41
RFFL-208ENST00000581039 UBE2G1P62253 170 aa6.27□□□□□ -1.41
RFFL-208ENST00000581039 ODF1Q14990 250 aa6.27□□□□□ -1.41
RFFL-208ENST00000581039 ZNF674Q2M3X9 581 aa6.27□□□□□ -1.41
RFFL-208ENST00000581039 FMC1Q96HJ9 113 aa6.27□□□□□ -1.41
RFFL-208ENST00000581039 ZNF471Q9BX82 626 aaPredicted RBP6.27□□□□□ -1.41
RFFL-208ENST00000581039 PLAC8Q9NZF1 115 aa6.27□□□□□ -1.41
RFFL-208ENST00000581039 KIF25-AS1Q9Y6Z4 181 aa6.27□□□□□ -1.41
RFFL-208ENST00000581039 A0A0J9YXV3 536 aa6.26□□□□□ -1.41
RFFL-208ENST00000581039 TRBV6-1A0A0K0K1D8 114 aa6.26□□□□□ -1.41
RFFL-208ENST00000581039 SLPIP03973 132 aa6.26□□□□□ -1.41
RFFL-208ENST00000581039 RAB5CP51148 216 aa6.26□□□□□ -1.41
RFFL-208ENST00000581039 WDR73Q6P4I2 378 aa6.26□□□□□ -1.41
RFFL-208ENST00000581039 S100ZQ8WXG8 99 aa6.26□□□□□ -1.41
RFFL-208ENST00000581039 MARVELD1Q9BSK0 173 aa6.26□□□□□ -1.41
RFFL-208ENST00000581039 NDUFA13Q9P0J0 144 aa6.26□□□□□ -1.41
RFFL-208ENST00000581039 VAX2Q9UIW0 290 aa6.26□□□□□ -1.41
RFFL-208ENST00000581039 IGHV1-24A0A0C4DH33 117 aa6.25□□□□□ -1.41
RFFL-208ENST00000581039 FAM74A7A6NL05 159 aa6.25□□□□□ -1.41
RFFL-208ENST00000581039 UPK1BO75841 260 aa6.25□□□□□ -1.41
RFFL-208ENST00000581039 GAS8-AS1O95177 125 aa6.25□□□□□ -1.41
RFFL-208ENST00000581039 GZMBP10144 247 aa6.25□□□□□ -1.41
RFFL-208ENST00000581039 LINC00299Q6ZSB3 139 aa6.25□□□□□ -1.41
RFFL-208ENST00000581039 OR10AG1Q8NH19 301 aa6.25□□□□□ -1.41
RFFL-208ENST00000581039 CTXND1A0A1B0GTU2 59 aa6.24□□□□□ -1.41
RFFL-208ENST00000581039 LTAP01374 205 aa6.24□□□□□ -1.41
RFFL-208ENST00000581039 SMIM17P0DL12 118 aa6.24□□□□□ -1.41
RFFL-208ENST00000581039 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
RFFL-208ENST00000581039 SSTP61278 116 aa6.24□□□□□ -1.41
RFFL-208ENST00000581039 PRR3P79522 188 aaKnown RBP6.24□□□□□ -1.41
RFFL-208ENST00000581039 COX6A2Q02221 97 aa6.24□□□□□ -1.41
RFFL-208ENST00000581039 IQCJQ1A5X6 159 aa6.24□□□□□ -1.41
RFFL-208ENST00000581039 MAJINQ3KP22 176 aa6.24□□□□□ -1.41
RFFL-208ENST00000581039 SPANXN1Q5VSR9 72 aa6.24□□□□□ -1.41
RFFL-208ENST00000581039 CFAP161Q6P656 301 aa6.24□□□□□ -1.41
RFFL-208ENST00000581039 REG3GQ6UW15 175 aa6.24□□□□□ -1.41
RFFL-208ENST00000581039 MUC21A0A0G2JKD1 596 aa6.23□□□□□ -1.41
RFFL-208ENST00000581039 MUC21A0A140T8X8 626 aa6.23□□□□□ -1.41
RFFL-208ENST00000581039 NDUFS6O75380 124 aaKnown RBP6.23□□□□□ -1.41
RFFL-208ENST00000581039 RPS10P46783 165 aaKnown RBP6.23□□□□□ -1.41
RFFL-208ENST00000581039 ZNF726P1Q15940 193 aa6.23□□□□□ -1.41
RFFL-208ENST00000581039 SPINK6Q6UWN8 80 aa6.23□□□□□ -1.41
RFFL-208ENST00000581039 C20orf203Q8NBC4 194 aa6.23□□□□□ -1.41
RFFL-208ENST00000581039 LYPD6BQ8NI32 183 aa6.23□□□□□ -1.41
RFFL-208ENST00000581039 AQP10Q96PS8 301 aa6.23□□□□□ -1.41
RFFL-208ENST00000581039 IGKV2-24A0A0C4DH68 120 aa6.22□□□□□ -1.41
RFFL-208ENST00000581039 A0A1B0GUV1 79 aa6.22□□□□□ -1.41
RFFL-208ENST00000581039 DEFA3P59666 94 aa6.22□□□□□ -1.41
RFFL-208ENST00000581039 IFITM3Q01628 133 aa6.22□□□□□ -1.41
RFFL-208ENST00000581039 CST9LP1Q5W188 147 aa6.22□□□□□ -1.41
RFFL-208ENST00000581039 STPG4Q8N801 248 aa6.22□□□□□ -1.41
RFFL-208ENST00000581039 TCEAL7Q9BRU2 100 aa6.22□□□□□ -1.41
RFFL-208ENST00000581039 SSBP4Q9BWG4 385 aaPredicted RBP6.22□□□□□ -1.41
RFFL-208ENST00000581039 IGLV4-60A0A075B6I1 120 aa6.21□□□□□ -1.42
RFFL-208ENST00000581039 BORCS7-ASMTA0A0B4J1R7 106 aa6.21□□□□□ -1.42
RFFL-208ENST00000581039 SNAI2O43623 268 aa6.21□□□□□ -1.42
RFFL-208ENST00000581039 CXCL1P09341 107 aa6.21□□□□□ -1.42
RFFL-208ENST00000581039 OR5AL1P0C617 328 aa6.21□□□□□ -1.42
RFFL-208ENST00000581039 AKR1C3P42330 323 aa6.21□□□□□ -1.42
RFFL-208ENST00000581039 SULT1A2P50226 295 aa6.21□□□□□ -1.42
RFFL-208ENST00000581039 PRSS3P2Q8NHM4 247 aa6.21□□□□□ -1.42
RFFL-208ENST00000581039 STOML3Q8TAV4 291 aa6.21□□□□□ -1.42
RFFL-208ENST00000581039 TMEM243Q9BU79 118 aa6.21□□□□□ -1.42
RFFL-208ENST00000581039 GAGE12HA6NDE8 117 aa6.2□□□□□ -1.42
RFFL-208ENST00000581039 H7C1H1 209 aa6.2□□□□□ -1.42
RFFL-208ENST00000581039 UBE2L6O14933 153 aa6.2□□□□□ -1.42
RFFL-208ENST00000581039 FHITP49789 147 aa6.2□□□□□ -1.42
RFFL-208ENST00000581039 DEFA1P59665 94 aa6.2□□□□□ -1.42
RFFL-208ENST00000581039 AKR1C8PQ5T2L2 129 aa6.2□□□□□ -1.42
RFFL-208ENST00000581039 RPL7L1Q6DKI1 246 aaKnown RBP6.2□□□□□ -1.42
RFFL-208ENST00000581039 INO80EQ8NBZ0 244 aaPredicted RBP6.2□□□□□ -1.42
RFFL-208ENST00000581039 AP1S3Q96PC3 154 aa6.2□□□□□ -1.42
RFFL-208ENST00000581039 GFRA4Q9GZZ7 299 aa6.2□□□□□ -1.42
RFFL-208ENST00000581039 MAP1LC3B2A6NCE7 125 aa6.19□□□□□ -1.42
RFFL-208ENST00000581039 M0QY20 66 aa6.19□□□□□ -1.42
RFFL-208ENST00000581039 S100A9P06702 114 aaKnown RBP6.19□□□□□ -1.42
RFFL-208ENST00000581039 MGPP08493 103 aa6.19□□□□□ -1.42
RFFL-208ENST00000581039 HIGD2BQ4VC39 106 aa6.19□□□□□ -1.42
RFFL-208ENST00000581039 C15orf56Q8N910 161 aa6.19□□□□□ -1.42
RFFL-208ENST00000581039 MAP1LC3BQ9GZQ8 125 aa6.19□□□□□ -1.42
RFFL-208ENST00000581039 LINC00474Q9P2X8 69 aa6.19□□□□□ -1.42
RFFL-208ENST00000581039 IGKV3OR2-268A0A0C4DH90 116 aa6.18□□□□□ -1.42
RFFL-208ENST00000581039 NKX2-5P52952 324 aaPredicted RBP6.18□□□□□ -1.42
RFFL-208ENST00000581039 SRSF9Q13242 221 aaKnown RBP eCLIP6.18□□□□□ -1.42
RFFL-208ENST00000581039 Q6ZRP5 223 aa6.18□□□□□ -1.42
RFFL-208ENST00000581039 BAGE2Q86Y30 109 aa6.18□□□□□ -1.42
RFFL-208ENST00000581039 A0A096LNI7 61 aa6.17□□□□□ -1.42
RFFL-208ENST00000581039 PAGE4O60829 102 aa6.17□□□□□ -1.42
RFFL-208ENST00000581039 SUMO4Q6EEV6 95 aa6.17□□□□□ -1.42
RFFL-208ENST00000581039 MLST8Q9BVC4 326 aa6.17□□□□□ -1.42
RFFL-208ENST00000581039 TPPP3Q9BW30 176 aa6.17□□□□□ -1.42
RFFL-208ENST00000581039 AMTP48728 403 aa6.16□□□□□ -1.42
RFFL-208ENST00000581039 COTL1Q14019 142 aa6.16□□□□□ -1.42
RFFL-208ENST00000581039 Q5BKY6 102 aa6.16□□□□□ -1.42
RFFL-208ENST00000581039 RASL11AQ6T310 242 aa6.16□□□□□ -1.42
RFFL-208ENST00000581039 PGLYRP4Q96LB8 373 aa6.16□□□□□ -1.42
RFFL-208ENST00000581039 PKIGQ9Y2B9 76 aa6.16□□□□□ -1.42
RFFL-208ENST00000581039 ALG5Q9Y673 324 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms