RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 ZNF876PQ49A33 203 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 MORN3Q6PF18 240 aaPredicted RBP4.48□□□□□ -1.69
PTPRM-213ENST00000580949 C12orf54Q6X4T0 127 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 SMIM15Q7Z3B0 74 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 TMEM158Q8WZ71 300 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 RASL10AQ92737 203 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 PTH2Q96A98 100 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 RPL39LQ96EH5 51 aaKnown RBP4.48□□□□□ -1.69
PTPRM-213ENST00000580949 AP1S3Q96PC3 154 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 DPH3P1Q9H4G8 78 aa4.48□□□□□ -1.69
PTPRM-213ENST00000580949 TRRAPQ9Y4A5 3859 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 IGLV2-18A0A075B6J9 118 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 IGHV1-24A0A0C4DH33 117 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 PLAC8L1A1L4L8 177 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 LINC01546A6NGU7 62 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 M0R2P5 195 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 PRYO14603 147 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 MGPP08493 103 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 AMTP48728 403 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 UFSP1Q6NVU6 142 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 ZNF705AQ6ZN79 300 aaPredicted RBP4.47□□□□□ -1.69
PTPRM-213ENST00000580949 LINC00173Q6ZV60 143 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 GTSCR1Q86UQ5 136 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 PRSS3P2Q8NHM4 247 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 RNASE8Q8TDE3 154 aaKnown RBP4.47□□□□□ -1.69
PTPRM-213ENST00000580949 CHCHD1Q96BP2 118 aaKnown RBP4.47□□□□□ -1.69
PTPRM-213ENST00000580949 MRAP2Q96G30 205 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 TMEM208Q9BTX3 173 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 CSTL1Q9H114 145 aa4.47□□□□□ -1.69
PTPRM-213ENST00000580949 MRPL16Q9NX20 251 aaKnown RBP4.47□□□□□ -1.69
PTPRM-213ENST00000580949 A0A096LNJ9 63 aa4.46□□□□□ -1.7
PTPRM-213ENST00000580949 M0QY20 66 aa4.46□□□□□ -1.7
PTPRM-213ENST00000580949 HSBP1O75506 76 aa4.46□□□□□ -1.7
PTPRM-213ENST00000580949 SMIM6P0DI80 62 aa4.46□□□□□ -1.7
PTPRM-213ENST00000580949 ZNF415Q09FC8 603 aa4.46□□□□□ -1.7
PTPRM-213ENST00000580949 JOSD1Q15040 202 aaPredicted RBP4.46□□□□□ -1.7
PTPRM-213ENST00000580949 FA2HQ7L5A8 372 aa4.46□□□□□ -1.7
PTPRM-213ENST00000580949 Q8N976 141 aa4.46□□□□□ -1.7
PTPRM-213ENST00000580949 C12orf57Q99622 126 aa4.46□□□□□ -1.7
PTPRM-213ENST00000580949 SPXQ9BT56 116 aa4.46□□□□□ -1.7
PTPRM-213ENST00000580949 Q9UF83 564 aa4.46□□□□□ -1.7
PTPRM-213ENST00000580949 LAMTOR2Q9Y2Q5 125 aa4.46□□□□□ -1.7
PTPRM-213ENST00000580949 GOLT1BQ9Y3E0 138 aa4.46□□□□□ -1.7
PTPRM-213ENST00000580949 PKD1L1Q8TDX9 2849 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 IGHV3-73A0A0B4J1V6 119 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 USP17L23D6RBM5 183 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 RS1O15537 224 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 EGFEM1PQ0D2K5 195 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 PIK3CD-AS1Q5SR53 167 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 SERTAD4-AS1Q5TG53 156 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 FAM74A4Q5TZK3 123 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 CFAP126Q5VTH2 177 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 Q6ZTI0 123 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 SPATA12Q7Z6I5 190 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 Q8N8P6 123 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 C1QTNF4Q9BXJ3 329 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 MAP1LC3AQ9H492 121 aa4.45□□□□□ -1.7
PTPRM-213ENST00000580949 TRGV1A0A0A0MS02 117 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 KIR2DL5BA0A0G2JN68 375 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 KIR2DL5BA0A0G2JPC4 375 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 TCAPO15273 167 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 C3orf79P0CE67 100 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 SMIM17P0DL12 118 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 P0DMU3 169 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 FAM231AP0DMU4 169 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 FAM231CP0DMU5 169 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 POLR2KP53803 58 aaKnown RBP4.44□□□□□ -1.7
PTPRM-213ENST00000580949 KRTDAPP60985 99 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 DAZ2Q13117 558 aaKnown RBP4.44□□□□□ -1.7
PTPRM-213ENST00000580949 NEGR1Q7Z3B1 354 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 KIR2DL5AQ8N109 375 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 KIR2DL5BQ8NHK3 375 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 TMEM263Q8WUH6 116 aaKnown RBP4.44□□□□□ -1.7
PTPRM-213ENST00000580949 C20orf78Q9BR46 151 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 OVOL2Q9BRP0 275 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 SMIM2Q9BVW6 85 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 NOP10Q9NPE3 64 aaKnown RBP4.44□□□□□ -1.7
PTPRM-213ENST00000580949 NXT2Q9NPJ8 142 aaKnown RBP4.44□□□□□ -1.7
PTPRM-213ENST00000580949 NBEAL2Q6ZNJ1 2754 aa4.44□□□□□ -1.7
PTPRM-213ENST00000580949 TRBV6-5A0A0K0K1A5 114 aa4.43□□□□□ -1.7
PTPRM-213ENST00000580949 A8MWV9 139 aa4.43□□□□□ -1.7
PTPRM-213ENST00000580949 G3V4G9 280 aa4.43□□□□□ -1.7
PTPRM-213ENST00000580949 IGHV4-30-4P0DP06 118 aa4.43□□□□□ -1.7
PTPRM-213ENST00000580949 ZNF56Q15929 161 aa4.43□□□□□ -1.7
PTPRM-213ENST00000580949 RRN3P1Q2M238 152 aa4.43□□□□□ -1.7
PTPRM-213ENST00000580949 DEFB104AQ8WTQ1 72 aa4.43□□□□□ -1.7
PTPRM-213ENST00000580949 RPL36ALQ969Q0 106 aaKnown RBP4.43□□□□□ -1.7
PTPRM-213ENST00000580949 TMEM70Q9BUB7 260 aa4.43□□□□□ -1.7
PTPRM-213ENST00000580949 ST20Q9HBF5 79 aa4.43□□□□□ -1.7
PTPRM-213ENST00000580949 NIT2Q9NQR4 276 aa4.43□□□□□ -1.7
PTPRM-213ENST00000580949 LEPROTL1O95214 131 aa4.42□□□□□ -1.7
PTPRM-213ENST00000580949 PPP1R17O96001 155 aa4.42□□□□□ -1.7
PTPRM-213ENST00000580949 IGHV3-53P01767 116 aa4.42□□□□□ -1.7
PTPRM-213ENST00000580949 HBDP02042 147 aa4.42□□□□□ -1.7
PTPRM-213ENST00000580949 FCER1GP30273 86 aa4.42□□□□□ -1.7
PTPRM-213ENST00000580949 EMP1P54849 157 aa4.42□□□□□ -1.7
PTPRM-213ENST00000580949 APOC4P55056 127 aa4.42□□□□□ -1.7
PTPRM-213ENST00000580949 RPL32P62910 135 aaKnown RBP4.42□□□□□ -1.7
PTPRM-213ENST00000580949 LAGE3Q14657 143 aa4.42□□□□□ -1.7
PTPRM-213ENST00000580949 DEFB135Q30KP9 77 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms