RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 TCRAP04437 139 aa8.16□□□□□ -1.1
CSNK1D-213ENST00000580446 TPT1P13693 172 aaKnown RBP8.16□□□□□ -1.1
CSNK1D-213ENST00000580446 KRTAP10-6P60371 365 aaPredicted RBP8.16□□□□□ -1.1
CSNK1D-213ENST00000580446 HBG1P69891 147 aa8.16□□□□□ -1.1
CSNK1D-213ENST00000580446 HBG2P69892 147 aa8.16□□□□□ -1.1
CSNK1D-213ENST00000580446 SYCNQ0VAF6 134 aa8.16□□□□□ -1.1
CSNK1D-213ENST00000580446 ZNF674Q2M3X9 581 aa8.16□□□□□ -1.1
CSNK1D-213ENST00000580446 STX12Q86Y82 276 aa8.16□□□□□ -1.1
CSNK1D-213ENST00000580446 SSBP4Q9BWG4 385 aaPredicted RBP8.16□□□□□ -1.1
CSNK1D-213ENST00000580446 RPP21Q9H633 154 aaKnown RBP8.16□□□□□ -1.1
CSNK1D-213ENST00000580446 TRAV34A0A0B4J273 112 aa8.15□□□□□ -1.1
CSNK1D-213ENST00000580446 LOC107984640A0A0U1RRK4 108 aa8.15□□□□□ -1.1
CSNK1D-213ENST00000580446 MUC21A0A140T8X8 626 aa8.15□□□□□ -1.1
CSNK1D-213ENST00000580446 FAM168BA1KXE4 195 aa8.15□□□□□ -1.1
CSNK1D-213ENST00000580446 SSTP61278 116 aa8.15□□□□□ -1.1
CSNK1D-213ENST00000580446 TMEM97Q5BJF2 176 aa8.15□□□□□ -1.1
CSNK1D-213ENST00000580446 TOMM5Q8N4H5 51 aa8.15□□□□□ -1.1
CSNK1D-213ENST00000580446 TMEM243Q9BU79 118 aa8.15□□□□□ -1.1
CSNK1D-213ENST00000580446 Q9H521 79 aa8.15□□□□□ -1.1
CSNK1D-213ENST00000580446 RPL18AQ02543 176 aaKnown RBP8.14□□□□□ -1.11
CSNK1D-213ENST00000580446 NHLH2Q02577 135 aa8.14□□□□□ -1.11
CSNK1D-213ENST00000580446 FOXI1Q12951 378 aa8.14□□□□□ -1.11
CSNK1D-213ENST00000580446 ZFP82Q8N141 532 aa8.14□□□□□ -1.11
CSNK1D-213ENST00000580446 VCX3AQ9NNX9 186 aa8.14□□□□□ -1.11
CSNK1D-213ENST00000580446 RSL24D1Q9UHA3 163 aaKnown RBP8.14□□□□□ -1.11
CSNK1D-213ENST00000580446 PKIGQ9Y2B9 76 aa8.14□□□□□ -1.11
CSNK1D-213ENST00000580446 SSPOA2VEC9 5147 aa8.14□□□□□ -1.11
CSNK1D-213ENST00000580446 A0A1B0GUV1 79 aa8.13□□□□□ -1.11
CSNK1D-213ENST00000580446 CRIP1P50238 77 aa8.13□□□□□ -1.11
CSNK1D-213ENST00000580446 OR5C1Q8NGR4 320 aa8.13□□□□□ -1.11
CSNK1D-213ENST00000580446 CARHSP1Q9Y2V2 147 aaKnown RBP8.13□□□□□ -1.11
CSNK1D-213ENST00000580446 FABP5P3A8MUU1 101 aa8.12□□□□□ -1.11
CSNK1D-213ENST00000580446 CFC1BP0CG36 223 aa8.12□□□□□ -1.11
CSNK1D-213ENST00000580446 XCL1P47992 114 aa8.12□□□□□ -1.11
CSNK1D-213ENST00000580446 ATP6V1FQ16864 119 aa8.12□□□□□ -1.11
CSNK1D-213ENST00000580446 ASB16-AS1Q495Z4 193 aa8.12□□□□□ -1.11
CSNK1D-213ENST00000580446 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
CSNK1D-213ENST00000580446 PPDPFQ9H3Y8 114 aa8.12□□□□□ -1.11
CSNK1D-213ENST00000580446 SH2D1AO60880 128 aa8.11□□□□□ -1.11
CSNK1D-213ENST00000580446 TAS2R45P59539 299 aa8.11□□□□□ -1.11
CSNK1D-213ENST00000580446 SPCS2Q15005 226 aa8.11□□□□□ -1.11
CSNK1D-213ENST00000580446 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
CSNK1D-213ENST00000580446 LINC00173Q6ZV60 143 aa8.11□□□□□ -1.11
CSNK1D-213ENST00000580446 WDR61Q9GZS3 305 aaKnown RBP8.11□□□□□ -1.11
CSNK1D-213ENST00000580446 ARL2-SNX15V9GYD0 113 aa8.11□□□□□ -1.11
CSNK1D-213ENST00000580446 PVALBP20472 110 aaPredicted RBP8.1□□□□□ -1.11
CSNK1D-213ENST00000580446 TMBIM6P55061 237 aa8.1□□□□□ -1.11
CSNK1D-213ENST00000580446 FAM19A5Q7Z5A7 132 aaPredicted RBP8.1□□□□□ -1.11
CSNK1D-213ENST00000580446 C5orf17Q8NAS9 161 aa8.1□□□□□ -1.11
CSNK1D-213ENST00000580446 OR10AG1Q8NH19 301 aa8.1□□□□□ -1.11
CSNK1D-213ENST00000580446 OPRPNQ99935 248 aaPredicted RBP8.1□□□□□ -1.11
CSNK1D-213ENST00000580446 ZNF471Q9BX82 626 aaPredicted RBP8.1□□□□□ -1.11
CSNK1D-213ENST00000580446 ANAPC11Q9NYG5 84 aa8.1□□□□□ -1.11
CSNK1D-213ENST00000580446 USH2AO75445 5202 aa8.09□□□□□ -1.11
CSNK1D-213ENST00000580446 A0A087WXM4 84 aa8.09□□□□□ -1.11
CSNK1D-213ENST00000580446 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.09□□□□□ -1.11
CSNK1D-213ENST00000580446 K7EQM0 130 aa8.09□□□□□ -1.11
CSNK1D-213ENST00000580446 UBE2L6O14933 153 aa8.09□□□□□ -1.11
CSNK1D-213ENST00000580446 AP3S2P59780 193 aa8.09□□□□□ -1.11
CSNK1D-213ENST00000580446 MEF2BQ02080 365 aaPredicted RBP8.09□□□□□ -1.11
CSNK1D-213ENST00000580446 RAB32Q13637 225 aa8.09□□□□□ -1.11
CSNK1D-213ENST00000580446 PYDC2Q56P42 97 aa8.09□□□□□ -1.11
CSNK1D-213ENST00000580446 DNLZQ5SXM8 178 aa8.09□□□□□ -1.11
CSNK1D-213ENST00000580446 ZNF561-AS1K7EIQ3 104 aa8.08□□□□□ -1.12
CSNK1D-213ENST00000580446 RPL12P30050 165 aaKnown RBP8.08□□□□□ -1.12
CSNK1D-213ENST00000580446 CAMPP49913 170 aa8.08□□□□□ -1.12
CSNK1D-213ENST00000580446 SAPCD1Q5SSQ6 148 aa8.08□□□□□ -1.12
CSNK1D-213ENST00000580446 FAM162BQ5T6X4 162 aa8.08□□□□□ -1.12
CSNK1D-213ENST00000580446 EIF5AL1Q6IS14 154 aaKnown RBP8.08□□□□□ -1.12
CSNK1D-213ENST00000580446 KCNIP2Q9NS61 270 aa8.08□□□□□ -1.12
CSNK1D-213ENST00000580446 IGLV4-69A0A075B6H9 119 aa8.07□□□□□ -1.12
CSNK1D-213ENST00000580446 IGHV1-58A0A0C4DH39 117 aa8.07□□□□□ -1.12
CSNK1D-213ENST00000580446 SERTM2A0A1B0GWG4 89 aa8.07□□□□□ -1.12
CSNK1D-213ENST00000580446 FGF6P10767 208 aa8.07□□□□□ -1.12
CSNK1D-213ENST00000580446 NKX2-5P52952 324 aaPredicted RBP8.07□□□□□ -1.12
CSNK1D-213ENST00000580446 FCGBPQ9Y6R7 5405 aaPredicted RBP8.06□□□□□ -1.12
CSNK1D-213ENST00000580446 NDUFB6O95139 128 aa8.06□□□□□ -1.12
CSNK1D-213ENST00000580446 ARL14EPLP0DKL9 152 aa8.06□□□□□ -1.12
CSNK1D-213ENST00000580446 SUMO1P63165 101 aaKnown RBP8.06□□□□□ -1.12
CSNK1D-213ENST00000580446 EPDR1Q9UM22 224 aa8.06□□□□□ -1.12
CSNK1D-213ENST00000580446 SYNE2Q8WXH0 6885 aaKnown RBP8.05□□□□□ -1.12
CSNK1D-213ENST00000580446 C17orf112F2Z3M2 114 aa8.05□□□□□ -1.12
CSNK1D-213ENST00000580446 H3BMQ9 156 aa8.05□□□□□ -1.12
CSNK1D-213ENST00000580446 CCL25O15444 150 aa8.05□□□□□ -1.12
CSNK1D-213ENST00000580446 APOMO95445 188 aa8.05□□□□□ -1.12
CSNK1D-213ENST00000580446 TRAV6A0A075B6T7 132 aa8.04□□□□□ -1.12
CSNK1D-213ENST00000580446 MGPP08493 103 aa8.04□□□□□ -1.12
CSNK1D-213ENST00000580446 UBE2BP63146 152 aa8.04□□□□□ -1.12
CSNK1D-213ENST00000580446 Q86TA4 180 aa8.04□□□□□ -1.12
CSNK1D-213ENST00000580446 NUP35Q8NFH5 326 aa8.04□□□□□ -1.12
CSNK1D-213ENST00000580446 OR5A1Q8NGJ0 315 aa8.04□□□□□ -1.12
CSNK1D-213ENST00000580446 MRPS26Q9BYN8 205 aaKnown RBP8.04□□□□□ -1.12
CSNK1D-213ENST00000580446 LRRC37A5PQ49AS3 106 aa8.03□□□□□ -1.12
CSNK1D-213ENST00000580446 KRTAP13-2Q52LG2 175 aa8.03□□□□□ -1.12
CSNK1D-213ENST00000580446 RNASEKQ6P5S7 137 aaKnown RBP8.03□□□□□ -1.12
CSNK1D-213ENST00000580446 PQLC2Q6ZP29 291 aa8.03□□□□□ -1.12
CSNK1D-213ENST00000580446 KRTAP7-1Q8IUC3 87 aa8.03□□□□□ -1.12
CSNK1D-213ENST00000580446 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
CSNK1D-213ENST00000580446 M0QY20 66 aa8.02□□□□□ -1.13
CSNK1D-213ENST00000580446 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms