RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 ORMDL2Q53FV1 153 aa12.23□□□□□ -0.45
SREBF1-218ENST00000578469 CDPF1Q6NVV7 123 aa12.23□□□□□ -0.45
SREBF1-218ENST00000578469 KIR2DL5AQ8N109 375 aa12.23□□□□□ -0.45
SREBF1-218ENST00000578469 KIR2DL5BQ8NHK3 375 aa12.23□□□□□ -0.45
SREBF1-218ENST00000578469 M0QY20 66 aa12.22□□□□□ -0.45
SREBF1-218ENST00000578469 VCYO14598 125 aa12.22□□□□□ -0.45
SREBF1-218ENST00000578469 DAZ2Q13117 558 aaKnown RBP12.22□□□□□ -0.45
SREBF1-218ENST00000578469 LGALS9BQ3B8N2 356 aa12.22□□□□□ -0.45
SREBF1-218ENST00000578469 CFAP126Q5VTH2 177 aa12.22□□□□□ -0.45
SREBF1-218ENST00000578469 PET117Q6UWS5 81 aa12.22□□□□□ -0.45
SREBF1-218ENST00000578469 EDA2RQ9HAV5 297 aa12.22□□□□□ -0.45
SREBF1-218ENST00000578469 A0A096LNJ9 63 aa12.21□□□□□ -0.45
SREBF1-218ENST00000578469 TRGV1A0A0A0MS02 117 aa12.21□□□□□ -0.45
SREBF1-218ENST00000578469 SYS1-DBNDD2H3BUS1 97 aa12.21□□□□□ -0.45
SREBF1-218ENST00000578469 TCAPO15273 167 aa12.21□□□□□ -0.45
SREBF1-218ENST00000578469 G0S2P27469 103 aa12.21□□□□□ -0.45
SREBF1-218ENST00000578469 PCP4L1A6NKN8 68 aa12.2□□□□□ -0.46
SREBF1-218ENST00000578469 NUDT3O95989 172 aa12.2□□□□□ -0.46
SREBF1-218ENST00000578469 ZFP2Q6ZN57 461 aa12.2□□□□□ -0.46
SREBF1-218ENST00000578469 LINC00173Q6ZV60 143 aa12.2□□□□□ -0.46
SREBF1-218ENST00000578469 Q8N976 141 aa12.2□□□□□ -0.46
SREBF1-218ENST00000578469 IGHV3-73A0A0B4J1V6 119 aa12.19□□□□□ -0.46
SREBF1-218ENST00000578469 SMIM9A6NGZ8 99 aa12.19□□□□□ -0.46
SREBF1-218ENST00000578469 POLR2KP53803 58 aaKnown RBP12.19□□□□□ -0.46
SREBF1-218ENST00000578469 UFSP1Q6NVU6 142 aa12.19□□□□□ -0.46
SREBF1-218ENST00000578469 TEX43Q6ZNM6 134 aa12.19□□□□□ -0.46
SREBF1-218ENST00000578469 OR4C5Q8NGB2 326 aa12.19□□□□□ -0.46
SREBF1-218ENST00000578469 KIR2DL4Q99706 377 aa12.19□□□□□ -0.46
SREBF1-218ENST00000578469 COL7A1Q02388 2944 aa12.19□□□□□ -0.46
SREBF1-218ENST00000578469 SDHAF1A6NFY7 115 aa12.18□□□□□ -0.46
SREBF1-218ENST00000578469 DEFB121Q5J5C9 76 aa12.18□□□□□ -0.46
SREBF1-218ENST00000578469 IFI27L1Q96BM0 104 aa12.18□□□□□ -0.46
SREBF1-218ENST00000578469 WWC2-AS2Q96NR7 200 aa12.18□□□□□ -0.46
SREBF1-218ENST00000578469 OVOL2Q9BRP0 275 aa12.18□□□□□ -0.46
SREBF1-218ENST00000578469 NOP10Q9NPE3 64 aaKnown RBP12.18□□□□□ -0.46
SREBF1-218ENST00000578469 TRAV4A0A0B4J268 109 aa12.17□□□□□ -0.46
SREBF1-218ENST00000578469 LINC01549A6NIU2 74 aa12.17□□□□□ -0.46
SREBF1-218ENST00000578469 K7EIL1 84 aa12.17□□□□□ -0.46
SREBF1-218ENST00000578469 CIDEAO60543 219 aa12.17□□□□□ -0.46
SREBF1-218ENST00000578469 ATP5LO75964 103 aa12.17□□□□□ -0.46
SREBF1-218ENST00000578469 PKIAP61925 76 aa12.17□□□□□ -0.46
SREBF1-218ENST00000578469 SPATA12Q7Z6I5 190 aa12.17□□□□□ -0.46
SREBF1-218ENST00000578469 VAMP8Q9BV40 100 aa12.17□□□□□ -0.46
SREBF1-218ENST00000578469 TRBV27A0A0K0K1C4 114 aa12.16□□□□□ -0.46
SREBF1-218ENST00000578469 TSTD3H0UI37 97 aa12.16□□□□□ -0.46
SREBF1-218ENST00000578469 IGHV3-53P01767 116 aa12.16□□□□□ -0.46
SREBF1-218ENST00000578469 Q6ZTI0 123 aa12.16□□□□□ -0.46
SREBF1-218ENST00000578469 DNAJC30Q96LL9 226 aa12.16□□□□□ -0.46
SREBF1-218ENST00000578469 TNFRSF18Q9Y5U5 241 aa12.16□□□□□ -0.46
SREBF1-218ENST00000578469 PLAC8L1A1L4L8 177 aa12.15□□□□□ -0.46
SREBF1-218ENST00000578469 H0Y8G0 127 aa12.15□□□□□ -0.46
SREBF1-218ENST00000578469 I3L3M4 83 aa12.14□□□□□ -0.47
SREBF1-218ENST00000578469 IGHV4-30-4P0DP06 118 aa12.14□□□□□ -0.47
SREBF1-218ENST00000578469 NEGR1Q7Z3B1 354 aa12.14□□□□□ -0.47
SREBF1-218ENST00000578469 ZNF664Q8N3J9 261 aa12.14□□□□□ -0.47
SREBF1-218ENST00000578469 C18orf15Q96N68 181 aa12.14□□□□□ -0.47
SREBF1-218ENST00000578469 TRGV2A0A075B6R0 118 aa12.13□□□□□ -0.47
SREBF1-218ENST00000578469 GAGE12BA1L429 117 aa12.13□□□□□ -0.47
SREBF1-218ENST00000578469 GAGE7O76087 117 aa12.13□□□□□ -0.47
SREBF1-218ENST00000578469 GAGE12FP0CL80 117 aa12.13□□□□□ -0.47
SREBF1-218ENST00000578469 GAGE12GP0CL81 117 aa12.13□□□□□ -0.47
SREBF1-218ENST00000578469 GAGE12IP0CL82 117 aa12.13□□□□□ -0.47
SREBF1-218ENST00000578469 EGFEM1PQ0D2K5 195 aa12.13□□□□□ -0.47
SREBF1-218ENST00000578469 RHOHQ15669 191 aa12.13□□□□□ -0.47
SREBF1-218ENST00000578469 LINC01545Q5VT33 79 aa12.13□□□□□ -0.47
SREBF1-218ENST00000578469 TOMM6Q96B49 74 aa12.13□□□□□ -0.47
SREBF1-218ENST00000578469 DNAH9Q9NYC9 4486 aa12.13□□□□□ -0.47
SREBF1-218ENST00000578469 PRSS1P07477 247 aa12.12□□□□□ -0.47
SREBF1-218ENST00000578469 LGALS9CQ6DKI2 356 aa12.12□□□□□ -0.47
SREBF1-218ENST00000578469 Q6ZSN1 163 aa12.12□□□□□ -0.47
SREBF1-218ENST00000578469 B9D2Q9BPU9 175 aa12.12□□□□□ -0.47
SREBF1-218ENST00000578469 PRO1933Q9H354 126 aa12.12□□□□□ -0.47
SREBF1-218ENST00000578469 CYSLTR1Q9Y271 337 aa12.12□□□□□ -0.47
SREBF1-218ENST00000578469 X6R8D5 127 aa12.12□□□□□ -0.47
SREBF1-218ENST00000578469 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.11□□□□□ -0.47
SREBF1-218ENST00000578469 EMP1P54849 157 aa12.11□□□□□ -0.47
SREBF1-218ENST00000578469 C2orf66Q6UXQ4 117 aa12.11□□□□□ -0.47
SREBF1-218ENST00000578469 ZNF479Q96JC4 524 aa12.11□□□□□ -0.47
SREBF1-218ENST00000578469 SCGB3A1Q96QR1 104 aa12.11□□□□□ -0.47
SREBF1-218ENST00000578469 PAM16Q9Y3D7 125 aa12.11□□□□□ -0.47
SREBF1-218ENST00000578469 TRAV9-2A0A087WT02 112 aa12.1□□□□□ -0.47
SREBF1-218ENST00000578469 TRBV10-1A0A0K0K1A3 114 aa12.1□□□□□ -0.47
SREBF1-218ENST00000578469 DEFB135Q30KP9 77 aa12.1□□□□□ -0.47
SREBF1-218ENST00000578469 Q6ZN92 141 aa12.1□□□□□ -0.47
SREBF1-218ENST00000578469 ATOH7Q8N100 152 aa12.1□□□□□ -0.47
SREBF1-218ENST00000578469 HSBP1L1C9JCN9 74 aa12.09□□□□□ -0.47
SREBF1-218ENST00000578469 P0DMU3 169 aa12.09□□□□□ -0.47
SREBF1-218ENST00000578469 FAM231AP0DMU4 169 aa12.09□□□□□ -0.47
SREBF1-218ENST00000578469 FAM231CP0DMU5 169 aa12.09□□□□□ -0.47
SREBF1-218ENST00000578469 KRTAP10-11P60412 298 aa12.09□□□□□ -0.47
SREBF1-218ENST00000578469 NEXN-AS1Q8NBZ9 246 aa12.09□□□□□ -0.47
SREBF1-218ENST00000578469 OR11H2Q8NH07 326 aa12.09□□□□□ -0.47
SREBF1-218ENST00000578469 A8MZ25 164 aa12.08□□□□□ -0.48
SREBF1-218ENST00000578469 K7EQD1 137 aa12.08□□□□□ -0.48
SREBF1-218ENST00000578469 TSHBP01222 138 aa12.08□□□□□ -0.48
SREBF1-218ENST00000578469 RPL36AP83881 106 aaKnown RBP12.08□□□□□ -0.48
SREBF1-218ENST00000578469 SPATA45Q537H7 98 aa12.08□□□□□ -0.48
SREBF1-218ENST00000578469 ERASQ7Z444 233 aa12.08□□□□□ -0.48
SREBF1-218ENST00000578469 RPL36ALQ969Q0 106 aaKnown RBP12.08□□□□□ -0.48
SREBF1-218ENST00000578469 TRGV4A0A0C4DH28 118 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms