RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 PPP1R17O96001 155 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 RPL39P62891 51 aaKnown RBP3.99□□□□□ -1.77
VAPA-203ENST00000577539 MRPL23Q16540 153 aaKnown RBP3.99□□□□□ -1.77
VAPA-203ENST00000577539 PRADC1Q9BSG0 188 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 MDFICQ9P1T7 246 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 HIGD1BQ9P298 99 aa3.99□□□□□ -1.77
VAPA-203ENST00000577539 NACAE9PAV3 2078 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 SDHAF1A6NFY7 115 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 LINC01546A6NGU7 62 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 SLC25A16P16260 332 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 FOXI1Q12951 378 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 SUMO4Q6EEV6 95 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 MTURNQ8N3F0 131 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 NEXN-AS1Q8NBZ9 246 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 BAALCQ8WXS3 180 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 TOMM6Q96B49 74 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 CELSR1Q9NYQ6 3014 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 IGHV3-73A0A0B4J1V6 119 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 KLHL30-AS1Q8NEE0 82 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 TM2D2Q9BX73 214 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 ITPR1Q14643 2758 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 MYMXA0A1B0GTQ4 84 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 NDUFA7O95182 113 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 COX6B1P14854 86 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 DEFB136Q30KP8 78 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 AMTNQ6UX39 209 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 OR5A1Q8NGJ0 315 aa3.98□□□□□ -1.77
VAPA-203ENST00000577539 APOMO95445 188 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 HERVK_113P61574 105 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 C12orf74Q32Q52 190 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 ZNF876PQ49A33 203 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 DCANP1Q8TF63 244 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 DUX3Q96PT4 197 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 MUC4Q99102 2169 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 IGHV3-64A0A075B6Q5 118 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 IGHV4OR15-8A0A075B7B6 117 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 A0A087WW49 117 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 TRAV12-1A0A0B4J245 112 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 KNCNA6PVL3 124 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 K7EMT4 169 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 PSMB8P28062 276 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 UFSP1Q6NVU6 142 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 CD164L2Q6UWJ8 174 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 ZFP2Q6ZN57 461 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 EPG5Q9HCE0 2579 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 IGHV1OR15-1A0A075B7D0 117 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 LOC107984156A0A0G2JMH3 177 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 C11orf86A6NJI1 115 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 KLLNB2CW77 178 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 HOXD3P31249 432 aaPredicted RBP3.97□□□□□ -1.77
VAPA-203ENST00000577539 SAMD13Q5VXD3 122 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 ARL17AQ8IVW1 177 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 IGSF10Q6WRI0 2623 aa3.97□□□□□ -1.77
VAPA-203ENST00000577539 A0A0J9YX75 114 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 IGLL5B9A064 214 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 PRRC2AP48634 2157 aaKnown RBP3.96□□□□□ -1.78
VAPA-203ENST00000577539 DSCR9P59020 149 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 DEFB131AP59861 70 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 TCTEX1D4Q5JR98 221 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 Q8N3U1 123 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 Q96MF0 132 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 OPRPNQ99935 248 aaPredicted RBP3.96□□□□□ -1.78
VAPA-203ENST00000577539 MRPL16Q9NX20 251 aaKnown RBP3.96□□□□□ -1.78
VAPA-203ENST00000577539 H3BMG7 143 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 LGALS1P09382 135 aaKnown RBP3.96□□□□□ -1.78
VAPA-203ENST00000577539 TRBV7-9A0A0J9YWB2 115 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 PRM2P04554 102 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 PMVKQ15126 192 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 PLEKHB2Q96CS7 222 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 FAM19A4Q96LR4 140 aa3.96□□□□□ -1.78
VAPA-203ENST00000577539 ZANQ9Y493 2812 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 IGHV3-16A0A0C4DH30 117 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 E9PLD3 99 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 K7EQG2 157 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 LINC00315P59091 139 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 DYNLRB2Q8TF09 96 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 VPREB3Q9UKI3 123 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 KIF25-AS1Q9Y6Z4 181 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 MTORP42345 2549 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 TEX48A0A1B0GUV7 120 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 LGALS3P17931 250 aaKnown RBP3.95□□□□□ -1.78
VAPA-203ENST00000577539 POLR2KP53803 58 aaKnown RBP3.95□□□□□ -1.78
VAPA-203ENST00000577539 TAL2Q16559 108 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 C18orf65Q6ZTR6 163 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 CRYBG3Q68DQ2 2970 aa3.95□□□□□ -1.78
VAPA-203ENST00000577539 IGHV3OR16-12A0A075B7B8 117 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 LINC01549A6NIU2 74 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 WFDC2Q14508 124 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 ETDBQ3ZM63 59 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 PAPPA-AS1Q5QFB9 102 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 APRG1Q8IVJ8 170 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 ACANP16112 2415 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 TMEM238C9JI98 176 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 H7C2G1 150 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 RRN3P1Q2M238 152 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 SH2D6Q7Z4S9 175 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 NOTCH2Q04721 2471 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 UTP20O75691 2785 aaKnown RBP3.94□□□□□ -1.78
VAPA-203ENST00000577539 TRBV7-3A0A075B6L6 115 aa3.94□□□□□ -1.78
VAPA-203ENST00000577539 A0A1B0GWB2 263 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms