RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 PMCHP20382 165 aa9.81□□□□□ -0.84
ERCC4-207ENST00000575156 NEGR1Q7Z3B1 354 aa9.81□□□□□ -0.84
ERCC4-207ENST00000575156 RHODO00212 210 aa9.81□□□□□ -0.84
ERCC4-207ENST00000575156 S100A2P29034 98 aa9.81□□□□□ -0.84
ERCC4-207ENST00000575156 SUMO2P61956 95 aaKnown RBP9.81□□□□□ -0.84
ERCC4-207ENST00000575156 LINC00612Q8N6U2 182 aa9.81□□□□□ -0.84
ERCC4-207ENST00000575156 DKK2Q9UBU2 259 aa9.81□□□□□ -0.84
ERCC4-207ENST00000575156 ZFP2Q6ZN57 461 aa9.8□□□□□ -0.84
ERCC4-207ENST00000575156 FA2HQ7L5A8 372 aa9.8□□□□□ -0.84
ERCC4-207ENST00000575156 TP53TG1Q9Y2A0 90 aa9.8□□□□□ -0.84
ERCC4-207ENST00000575156 DNAH9Q9NYC9 4486 aa9.8□□□□□ -0.84
ERCC4-207ENST00000575156 HSBP1O75506 76 aa9.79□□□□□ -0.84
ERCC4-207ENST00000575156 PRSS47A8MTI9 375 aa9.79□□□□□ -0.84
ERCC4-207ENST00000575156 TCAPO15273 167 aa9.79□□□□□ -0.84
ERCC4-207ENST00000575156 AMTP48728 403 aa9.79□□□□□ -0.84
ERCC4-207ENST00000575156 CHCHD1Q96BP2 118 aaKnown RBP9.79□□□□□ -0.84
ERCC4-207ENST00000575156 SMIM2Q9BVW6 85 aa9.79□□□□□ -0.84
ERCC4-207ENST00000575156 AP5S1Q9NUS5 200 aa9.79□□□□□ -0.84
ERCC4-207ENST00000575156 IGHV1-24A0A0C4DH33 117 aa9.78□□□□□ -0.84
ERCC4-207ENST00000575156 AKR1D1P51857 326 aa9.78□□□□□ -0.84
ERCC4-207ENST00000575156 Q8N8P6 123 aa9.78□□□□□ -0.84
ERCC4-207ENST00000575156 C20orf78Q9BR46 151 aa9.78□□□□□ -0.84
ERCC4-207ENST00000575156 TMEM70Q9BUB7 260 aa9.78□□□□□ -0.84
ERCC4-207ENST00000575156 ST20Q9HBF5 79 aa9.78□□□□□ -0.84
ERCC4-207ENST00000575156 NIT2Q9NQR4 276 aa9.78□□□□□ -0.84
ERCC4-207ENST00000575156 LYRM9A8MSI8 78 aa9.78□□□□□ -0.84
ERCC4-207ENST00000575156 A0A096LNJ9 63 aa9.77□□□□□ -0.85
ERCC4-207ENST00000575156 TRBV6-5A0A0K0K1A5 114 aa9.77□□□□□ -0.85
ERCC4-207ENST00000575156 SDHAF1A6NFY7 115 aa9.77□□□□□ -0.85
ERCC4-207ENST00000575156 POLR2KP53803 58 aaKnown RBP9.77□□□□□ -0.85
ERCC4-207ENST00000575156 FHL2Q14192 279 aa9.77□□□□□ -0.85
ERCC4-207ENST00000575156 SLC25A29Q8N8R3 303 aa9.77□□□□□ -0.85
ERCC4-207ENST00000575156 NEXN-AS1Q8NBZ9 246 aa9.77□□□□□ -0.85
ERCC4-207ENST00000575156 OR10D4PQ8NGN7 298 aa9.77□□□□□ -0.85
ERCC4-207ENST00000575156 TMEM18Q96B42 140 aa9.77□□□□□ -0.85
ERCC4-207ENST00000575156 EDA2RQ9HAV5 297 aa9.77□□□□□ -0.85
ERCC4-207ENST00000575156 NXT2Q9NPJ8 142 aaKnown RBP9.77□□□□□ -0.85
ERCC4-207ENST00000575156 PPP1R17O96001 155 aa9.76□□□□□ -0.85
ERCC4-207ENST00000575156 PACRGQ96M98 296 aaPredicted RBP9.76□□□□□ -0.85
ERCC4-207ENST00000575156 LINC01546A6NGU7 62 aa9.76□□□□□ -0.85
ERCC4-207ENST00000575156 H7C1H1 209 aa9.76□□□□□ -0.85
ERCC4-207ENST00000575156 LINC00173Q6ZV60 143 aa9.76□□□□□ -0.85
ERCC4-207ENST00000575156 TRGV4A0A0C4DH28 118 aa9.75□□□□□ -0.85
ERCC4-207ENST00000575156 LOC100131303A0A0U1RQF7 123 aa9.75□□□□□ -0.85
ERCC4-207ENST00000575156 C18orf15Q96N68 181 aa9.75□□□□□ -0.85
ERCC4-207ENST00000575156 TM2D3Q9BRN9 247 aa9.75□□□□□ -0.85
ERCC4-207ENST00000575156 K7EQD1 137 aa9.75□□□□□ -0.85
ERCC4-207ENST00000575156 SPART-AS1P0CW21 52 aa9.75□□□□□ -0.85
ERCC4-207ENST00000575156 DAD1P61803 113 aa9.75□□□□□ -0.85
ERCC4-207ENST00000575156 COL7A1Q02388 2944 aa9.74□□□□□ -0.85
ERCC4-207ENST00000575156 MEGF8Q7Z7M0 2845 aa9.74□□□□□ -0.85
ERCC4-207ENST00000575156 TNFRSF18Q9Y5U5 241 aa9.74□□□□□ -0.85
ERCC4-207ENST00000575156 A0A0J9YWU9 116 aa9.73□□□□□ -0.85
ERCC4-207ENST00000575156 TRBV27A0A0K0K1C4 114 aa9.73□□□□□ -0.85
ERCC4-207ENST00000575156 PRKDCP78527 4128 aaKnown RBP9.73□□□□□ -0.85
ERCC4-207ENST00000575156 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
ERCC4-207ENST00000575156 VCYO14598 125 aa9.73□□□□□ -0.85
ERCC4-207ENST00000575156 RPL32P62910 135 aaKnown RBP9.73□□□□□ -0.85
ERCC4-207ENST00000575156 LAGE3Q14657 143 aa9.73□□□□□ -0.85
ERCC4-207ENST00000575156 ZNRF2Q8NHG8 242 aa9.73□□□□□ -0.85
ERCC4-207ENST00000575156 PHLDA1Q8WV24 401 aaPredicted RBP9.73□□□□□ -0.85
ERCC4-207ENST00000575156 SPATA25Q9BR10 227 aa9.73□□□□□ -0.85
ERCC4-207ENST00000575156 GAGE12JA6NER3 117 aa9.72□□□□□ -0.85
ERCC4-207ENST00000575156 GAGE1Q13065 139 aa9.72□□□□□ -0.85
ERCC4-207ENST00000575156 GAGE4Q13068 117 aa9.72□□□□□ -0.85
ERCC4-207ENST00000575156 GAGE5Q13069 117 aa9.72□□□□□ -0.85
ERCC4-207ENST00000575156 GAGE13Q4V321 117 aa9.72□□□□□ -0.85
ERCC4-207ENST00000575156 TRBV6-4A0A1B0GX49 114 aa9.71□□□□□ -0.85
ERCC4-207ENST00000575156 TSHBP01222 138 aa9.71□□□□□ -0.85
ERCC4-207ENST00000575156 C12orf74Q32Q52 190 aa9.71□□□□□ -0.85
ERCC4-207ENST00000575156 C11orf68Q9H3H3 251 aaKnown RBP9.71□□□□□ -0.85
ERCC4-207ENST00000575156 HHLA3Q9XRX5 114 aa9.71□□□□□ -0.85
ERCC4-207ENST00000575156 CIDEAO60543 219 aa9.71□□□□□ -0.86
ERCC4-207ENST00000575156 HBDP02042 147 aa9.71□□□□□ -0.86
ERCC4-207ENST00000575156 BTF3P20290 206 aaKnown RBP9.71□□□□□ -0.86
ERCC4-207ENST00000575156 TRBV7-3A0A075B6L6 115 aa9.7□□□□□ -0.86
ERCC4-207ENST00000575156 TRBV10-1A0A0K0K1A3 114 aa9.7□□□□□ -0.86
ERCC4-207ENST00000575156 LEPROTL1O95214 131 aa9.7□□□□□ -0.86
ERCC4-207ENST00000575156 NUDT3O95989 172 aa9.7□□□□□ -0.86
ERCC4-207ENST00000575156 HTN3P15516 51 aa9.7□□□□□ -0.86
ERCC4-207ENST00000575156 FCER1GP30273 86 aa9.7□□□□□ -0.86
ERCC4-207ENST00000575156 DNAJC30Q96LL9 226 aa9.7□□□□□ -0.86
ERCC4-207ENST00000575156 KIR2DL4Q99706 377 aa9.7□□□□□ -0.86
ERCC4-207ENST00000575156 I3L3M4 83 aa9.7□□□□□ -0.86
ERCC4-207ENST00000575156 CRYBA4P53673 196 aa9.7□□□□□ -0.86
ERCC4-207ENST00000575156 ATP5G1P05496 136 aa9.69□□□□□ -0.86
ERCC4-207ENST00000575156 KRTDAPP60985 99 aa9.69□□□□□ -0.86
ERCC4-207ENST00000575156 RPL36AP83881 106 aaKnown RBP9.69□□□□□ -0.86
ERCC4-207ENST00000575156 RHOHQ15669 191 aa9.69□□□□□ -0.86
ERCC4-207ENST00000575156 PYY3Q5JQD4 70 aa9.69□□□□□ -0.86
ERCC4-207ENST00000575156 RPL36ALQ969Q0 106 aaKnown RBP9.69□□□□□ -0.86
ERCC4-207ENST00000575156 A0A0J9YY99 117 aa9.68□□□□□ -0.86
ERCC4-207ENST00000575156 C3orf79P0CE67 100 aa9.68□□□□□ -0.86
ERCC4-207ENST00000575156 UBE2D3P61077 147 aa9.68□□□□□ -0.86
ERCC4-207ENST00000575156 UBE2D2P62837 147 aa9.68□□□□□ -0.86
ERCC4-207ENST00000575156 ORMDL2Q53FV1 153 aa9.68□□□□□ -0.86
ERCC4-207ENST00000575156 F5H768 121 aa9.68□□□□□ -0.86
ERCC4-207ENST00000575156 NANOS2P60321 138 aaKnown RBP9.68□□□□□ -0.86
ERCC4-207ENST00000575156 RPL39P62891 51 aaKnown RBP9.68□□□□□ -0.86
ERCC4-207ENST00000575156 CDPF1Q6NVV7 123 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms