RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 M0R2P5 195 aa10.26□□□□□ -0.77
VPS33B-208ENST00000574755 PROK1P58294 105 aa10.26□□□□□ -0.77
VPS33B-208ENST00000574755 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
VPS33B-208ENST00000574755 CLUHP3Q96NS8 147 aa10.26□□□□□ -0.77
VPS33B-208ENST00000574755 TP53TG1Q9Y2A0 90 aa10.26□□□□□ -0.77
VPS33B-208ENST00000574755 SETXQ7Z333 2677 aaKnown RBP10.26□□□□□ -0.77
VPS33B-208ENST00000574755 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
VPS33B-208ENST00000574755 TMEM208Q9BTX3 173 aa10.26□□□□□ -0.77
VPS33B-208ENST00000574755 CHTOPQ9Y3Y2 248 aaKnown RBP10.26□□□□□ -0.77
VPS33B-208ENST00000574755 NOTCH2Q04721 2471 aa10.25□□□□□ -0.77
VPS33B-208ENST00000574755 IGHV3-73A0A0B4J1V6 119 aa10.25□□□□□ -0.77
VPS33B-208ENST00000574755 DLEU1O43261 78 aa10.25□□□□□ -0.77
VPS33B-208ENST00000574755 OTOGQ6ZRI0 2925 aa10.25□□□□□ -0.77
VPS33B-208ENST00000574755 LINC01549A6NIU2 74 aa10.25□□□□□ -0.77
VPS33B-208ENST00000574755 ADARB2-AS1A8MUL3 147 aa10.24□□□□□ -0.77
VPS33B-208ENST00000574755 A8MWV9 139 aa10.24□□□□□ -0.77
VPS33B-208ENST00000574755 RPL39P62891 51 aaKnown RBP10.24□□□□□ -0.77
VPS33B-208ENST00000574755 LINC00467Q9BRT7 94 aa10.24□□□□□ -0.77
VPS33B-208ENST00000574755 IGHV3OR16-12A0A075B7B8 117 aa10.24□□□□□ -0.77
VPS33B-208ENST00000574755 C11orf72Q8NBR9 251 aa10.24□□□□□ -0.77
VPS33B-208ENST00000574755 SIVA1O15304 175 aa10.23□□□□□ -0.77
VPS33B-208ENST00000574755 TTTY13Q9BZ97 58 aa10.23□□□□□ -0.77
VPS33B-208ENST00000574755 RIPPLY3P57055 190 aa10.23□□□□□ -0.77
VPS33B-208ENST00000574755 PIK3CD-AS1Q5SR53 167 aa10.23□□□□□ -0.77
VPS33B-208ENST00000574755 Q6ZVH6 145 aa10.23□□□□□ -0.77
VPS33B-208ENST00000574755 NACAE9PAV3 2078 aa10.22□□□□□ -0.77
VPS33B-208ENST00000574755 PRSS29PA6NIE9 313 aa10.22□□□□□ -0.77
VPS33B-208ENST00000574755 IGIPA6NJ69 53 aa10.22□□□□□ -0.77
VPS33B-208ENST00000574755 IGLV1-51P01701 117 aa10.22□□□□□ -0.77
VPS33B-208ENST00000574755 TMEM97Q5BJF2 176 aa10.22□□□□□ -0.77
VPS33B-208ENST00000574755 I3L3M4 83 aa10.22□□□□□ -0.77
VPS33B-208ENST00000574755 SPXQ9BT56 116 aa10.22□□□□□ -0.77
VPS33B-208ENST00000574755 MRPL16Q9NX20 251 aaKnown RBP10.22□□□□□ -0.77
VPS33B-208ENST00000574755 TSHBP01222 138 aa10.21□□□□□ -0.77
VPS33B-208ENST00000574755 CMC4P56277 68 aaPredicted RBP10.21□□□□□ -0.77
VPS33B-208ENST00000574755 C1orf158Q8N1D5 194 aa10.21□□□□□ -0.77
VPS33B-208ENST00000574755 PTH2Q96A98 100 aa10.21□□□□□ -0.77
VPS33B-208ENST00000574755 EDA2RQ9HAV5 297 aa10.21□□□□□ -0.77
VPS33B-208ENST00000574755 COX11Q9Y6N1 276 aa10.21□□□□□ -0.77
VPS33B-208ENST00000574755 P0DMU3 169 aa10.21□□□□□ -0.78
VPS33B-208ENST00000574755 FAM231AP0DMU4 169 aa10.21□□□□□ -0.78
VPS33B-208ENST00000574755 FAM231CP0DMU5 169 aa10.21□□□□□ -0.78
VPS33B-208ENST00000574755 AZU1P20160 251 aa10.21□□□□□ -0.78
VPS33B-208ENST00000574755 RHOHQ15669 191 aa10.21□□□□□ -0.78
VPS33B-208ENST00000574755 CFAP126Q5VTH2 177 aa10.21□□□□□ -0.78
VPS33B-208ENST00000574755 UFSP1Q6NVU6 142 aa10.21□□□□□ -0.78
VPS33B-208ENST00000574755 TMEM141Q96I45 108 aa10.21□□□□□ -0.78
VPS33B-208ENST00000574755 TIMM17AQ99595 171 aa10.21□□□□□ -0.78
VPS33B-208ENST00000574755 TRAV8-6A0A0B4J262 113 aa10.2□□□□□ -0.78
VPS33B-208ENST00000574755 INAFM1C9JVW0 142 aa10.2□□□□□ -0.78
VPS33B-208ENST00000574755 HSD52Q0P140 79 aa10.19□□□□□ -0.78
VPS33B-208ENST00000574755 WFDC10AQ9H1F0 79 aa10.19□□□□□ -0.78
VPS33B-208ENST00000574755 JMJD1CQ15652 2540 aa10.19□□□□□ -0.78
VPS33B-208ENST00000574755 GAGE1Q13065 139 aa10.19□□□□□ -0.78
VPS33B-208ENST00000574755 PMVKQ15126 192 aa10.19□□□□□ -0.78
VPS33B-208ENST00000574755 TNFRSF18Q9Y5U5 241 aa10.19□□□□□ -0.78
VPS33B-208ENST00000574755 RHODO00212 210 aa10.18□□□□□ -0.78
VPS33B-208ENST00000574755 KRTAP10-3P60369 221 aa10.18□□□□□ -0.78
VPS33B-208ENST00000574755 NDUFA11Q86Y39 141 aa10.18□□□□□ -0.78
VPS33B-208ENST00000574755 ORAOV1Q8WV07 137 aa10.18□□□□□ -0.78
VPS33B-208ENST00000574755 TRBV25-1A0A075B6N4 114 aa10.18□□□□□ -0.78
VPS33B-208ENST00000574755 PF4P02776 101 aa10.18□□□□□ -0.78
VPS33B-208ENST00000574755 SEC11AP67812 179 aa10.18□□□□□ -0.78
VPS33B-208ENST00000574755 BEAN1Q3B7T3 259 aa10.18□□□□□ -0.78
VPS33B-208ENST00000574755 TAX1BP3O14907 124 aa10.17□□□□□ -0.78
VPS33B-208ENST00000574755 Q6ZSN1 163 aa10.17□□□□□ -0.78
VPS33B-208ENST00000574755 C20orf203Q8NBC4 194 aa10.17□□□□□ -0.78
VPS33B-208ENST00000574755 FAM110AQ9BQ89 295 aa10.17□□□□□ -0.78
VPS33B-208ENST00000574755 CST9LQ9H4G1 147 aa10.17□□□□□ -0.78
VPS33B-208ENST00000574755 NPSP0C0P6 89 aa10.17□□□□□ -0.78
VPS33B-208ENST00000574755 EMP1P54849 157 aa10.17□□□□□ -0.78
VPS33B-208ENST00000574755 OR11H2Q8NH07 326 aa10.17□□□□□ -0.78
VPS33B-208ENST00000574755 HIGD1BQ9P298 99 aa10.17□□□□□ -0.78
VPS33B-208ENST00000574755 NSD1Q96L73 2696 aaPredicted RBP10.16□□□□□ -0.78
VPS33B-208ENST00000574755 MAPKAPK5-AS1Q8N8E1 139 aa10.16□□□□□ -0.78
VPS33B-208ENST00000574755 RNASE8Q8TDE3 154 aaKnown RBP10.16□□□□□ -0.78
VPS33B-208ENST00000574755 CHAC1Q9BUX1 264 aa10.16□□□□□ -0.78
VPS33B-208ENST00000574755 Q9UF83 564 aa10.16□□□□□ -0.78
VPS33B-208ENST00000574755 IGLV4-69A0A075B6H9 119 aa10.16□□□□□ -0.78
VPS33B-208ENST00000574755 TRGV1A0A0A0MS02 117 aa10.16□□□□□ -0.78
VPS33B-208ENST00000574755 RS1O15537 224 aa10.16□□□□□ -0.78
VPS33B-208ENST00000574755 RPL35AP18077 110 aaKnown RBP10.16□□□□□ -0.78
VPS33B-208ENST00000574755 PAPPA-AS1Q5QFB9 102 aa10.16□□□□□ -0.78
VPS33B-208ENST00000574755 C19orf73Q9NVV2 129 aa10.16□□□□□ -0.78
VPS33B-208ENST00000574755 IGHV3-53P01767 116 aa10.15□□□□□ -0.78
VPS33B-208ENST00000574755 TMEM263Q8WUH6 116 aaKnown RBP10.15□□□□□ -0.78
VPS33B-208ENST00000574755 A6NDN8 102 aa10.15□□□□□ -0.79
VPS33B-208ENST00000574755 C11orf86A6NJI1 115 aa10.15□□□□□ -0.79
VPS33B-208ENST00000574755 IL17DQ8TAD2 202 aa10.15□□□□□ -0.79
VPS33B-208ENST00000574755 OPRPNQ99935 248 aaPredicted RBP10.15□□□□□ -0.79
VPS33B-208ENST00000574755 NOTCH3Q9UM47 2321 aa10.14□□□□□ -0.79
VPS33B-208ENST00000574755 E9PLD3 99 aa10.14□□□□□ -0.79
VPS33B-208ENST00000574755 GIG44P09565 113 aaPredicted RBP10.14□□□□□ -0.79
VPS33B-208ENST00000574755 OR4C5Q8NGB2 326 aa10.14□□□□□ -0.79
VPS33B-208ENST00000574755 PRADC1Q9BSG0 188 aa10.14□□□□□ -0.79
VPS33B-208ENST00000574755 GCSHP23434 173 aa10.13□□□□□ -0.79
VPS33B-208ENST00000574755 LINC00482Q8N8I6 264 aa10.13□□□□□ -0.79
VPS33B-208ENST00000574755 DNAJC30Q96LL9 226 aa10.12□□□□□ -0.79
VPS33B-208ENST00000574755 C1QTNF4Q9BXJ3 329 aa10.12□□□□□ -0.79
VPS33B-208ENST00000574755 C2CD3Q4AC94 2353 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms