RNA–Protein interactions for RNA: ENST00000573169.1

NUP88-206, Transcript of nucleoporin 88, humanhuman

TSL 1 (best)

Gene NUP88, Length 1,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-206ENST00000573169 ETDBQ3ZM63 59 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 ORMDL2Q53FV1 153 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 LYRM7Q5U5X0 104 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 C9orf47Q6ZRZ4 202 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 Q8N2B8 174 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 NEXN-AS1Q8NBZ9 246 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 DPM3Q9P2X0 92 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 CYSLTR1Q9Y271 337 aa4.98□□□□□ -1.61
NUP88-206ENST00000573169 TRBV20-1A0A075B6N2 111 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 OR11H12B2RN74 326 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 BUB3O43684 328 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 CNIH1O95406 144 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 ORM1P02763 201 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 LGALS1P09382 135 aaKnown RBP4.97□□□□□ -1.61
NUP88-206ENST00000573169 CD7P09564 240 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 C10orf99Q6UWK7 81 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 SH2D6Q7Z4S9 175 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 OR11H1Q8NG94 326 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 OR11H2Q8NH07 326 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 MRAPQ8TCY5 172 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 DLX4Q92988 240 aaPredicted RBP4.97□□□□□ -1.61
NUP88-206ENST00000573169 HIST1H4GQ99525 98 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 SMIM2Q9BVW6 85 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 TTTY13Q9BZ97 58 aa4.97□□□□□ -1.61
NUP88-206ENST00000573169 PLXNB1O43157 2135 aa4.96□□□□□ -1.62
NUP88-206ENST00000573169 TRBV7-9A0A0J9YWB2 115 aa4.96□□□□□ -1.62
NUP88-206ENST00000573169 PPP1R17O96001 155 aa4.96□□□□□ -1.62
NUP88-206ENST00000573169 PLA2G1BP04054 148 aaKnown RBP4.96□□□□□ -1.62
NUP88-206ENST00000573169 APELAP0DMC3 54 aa4.96□□□□□ -1.62
NUP88-206ENST00000573169 GATA1P15976 413 aaPredicted RBP4.96□□□□□ -1.62
NUP88-206ENST00000573169 PAPPA-AS1Q5QFB9 102 aa4.96□□□□□ -1.62
NUP88-206ENST00000573169 LCE4AQ5TA78 99 aa4.96□□□□□ -1.62
NUP88-206ENST00000573169 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.96□□□□□ -1.62
NUP88-206ENST00000573169 NDUFA11Q86Y39 141 aa4.96□□□□□ -1.62
NUP88-206ENST00000573169 Q8TAT8 98 aa4.96□□□□□ -1.62
NUP88-206ENST00000573169 PPDPFLQ8WWR9 84 aa4.96□□□□□ -1.62
NUP88-206ENST00000573169 AGPAT4-IT1Q9H0P7 198 aa4.96□□□□□ -1.62
NUP88-206ENST00000573169 C11orf21Q9P2W6 132 aa4.96□□□□□ -1.62
NUP88-206ENST00000573169 IGHV4OR15-8A0A075B7B6 117 aa4.95□□□□□ -1.62
NUP88-206ENST00000573169 A0A087WW49 117 aa4.95□□□□□ -1.62
NUP88-206ENST00000573169 TMEM262E9PQX1 116 aa4.95□□□□□ -1.62
NUP88-206ENST00000573169 NXPH4O95158 308 aa4.95□□□□□ -1.62
NUP88-206ENST00000573169 APOMO95445 188 aa4.95□□□□□ -1.62
NUP88-206ENST00000573169 PF4V1P10720 104 aa4.95□□□□□ -1.62
NUP88-206ENST00000573169 TCTAP57738 103 aa4.95□□□□□ -1.62
NUP88-206ENST00000573169 MINOS1Q5TGZ0 78 aa4.95□□□□□ -1.62
NUP88-206ENST00000573169 TEN1Q86WV5 123 aa4.95□□□□□ -1.62
NUP88-206ENST00000573169 APRG1Q8IVJ8 170 aa4.95□□□□□ -1.62
NUP88-206ENST00000573169 MINOS1-NBL1R4GNA1 71 aa4.95□□□□□ -1.62
NUP88-206ENST00000573169 TRAV8-2A0A0B4J237 113 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 PRAC2D3DTV9 90 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 K7EIL1 84 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 TRGV3P03979 118 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 INSL3P51460 131 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 KRTAP10-11P60412 298 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 SUMO2P61956 95 aaKnown RBP4.94□□□□□ -1.62
NUP88-206ENST00000573169 NDPQ00604 133 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 TMEM78Q5T7P6 136 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 Q6ZUT4 128 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 NFE4Q86UQ8 179 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 WFDC9Q8NEX5 89 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 CARD19Q96LW7 228 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 GEMIN7Q9H840 131 aaKnown RBP4.94□□□□□ -1.62
NUP88-206ENST00000573169 SPANXA1Q9NS26 97 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 ERG28Q9UKR5 140 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 DNAH9Q9NYC9 4486 aa4.94□□□□□ -1.62
NUP88-206ENST00000573169 TRAV26-1A0A087WT03 109 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 A0A0J9YY99 117 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 SPINK8P0C7L1 97 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 HLA-DMBP28068 263 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 HOXD3P31249 432 aaPredicted RBP4.93□□□□□ -1.62
NUP88-206ENST00000573169 ASIPP42127 132 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 ATP5G2Q06055 141 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 KHDC1LQ5JSQ8 128 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 Q6Q795 121 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 AMTNQ6UX39 209 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 C18orf65Q6ZTR6 163 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 SLC25A29Q8N8R3 303 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 SYT8Q8NBV8 401 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 BAALCQ8WXS3 180 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 RASL10AQ92737 203 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 TMEM141Q96I45 108 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 RAX2Q96IS3 184 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 FAM19A4Q96LR4 140 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 LINC00477Q96M19 166 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 SCGB3A1Q96QR1 104 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 PRADC1Q9BSG0 188 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 LINC00527Q9UJ94 153 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 SELENOKQ9Y6D0 94 aa4.93□□□□□ -1.62
NUP88-206ENST00000573169 IGHV7-81A0A0B4J1V7 117 aa4.92□□□□□ -1.62
NUP88-206ENST00000573169 PRSS29PA6NIE9 313 aa4.92□□□□□ -1.62
NUP88-206ENST00000573169 IGIPA6NJ69 53 aa4.92□□□□□ -1.62
NUP88-206ENST00000573169 C11orf86A6NJI1 115 aa4.92□□□□□ -1.62
NUP88-206ENST00000573169 LINC01548A6NM66 108 aa4.92□□□□□ -1.62
NUP88-206ENST00000573169 BRI3O95415 125 aa4.92□□□□□ -1.62
NUP88-206ENST00000573169 IGHV3-30P01768 117 aa4.92□□□□□ -1.62
NUP88-206ENST00000573169 CLEC3BP05452 202 aa4.92□□□□□ -1.62
NUP88-206ENST00000573169 ZNF688P0C7X2 276 aa4.92□□□□□ -1.62
NUP88-206ENST00000573169 P0DMU3 169 aa4.92□□□□□ -1.62
NUP88-206ENST00000573169 FAM231AP0DMU4 169 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms