RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CIDEAO60543 219 aa9.62□□□□□ -0.87
RPAIN-209ENST00000571558 HLA-DQA1P01909 254 aa9.62□□□□□ -0.87
RPAIN-209ENST00000571558 MT-ND6P03923 174 aa9.62□□□□□ -0.87
RPAIN-209ENST00000571558 SMIM17P0DL12 118 aa9.62□□□□□ -0.87
RPAIN-209ENST00000571558 RAB4BP61018 213 aa9.62□□□□□ -0.87
RPAIN-209ENST00000571558 FAM74A4Q5TZK3 123 aa9.62□□□□□ -0.87
RPAIN-209ENST00000571558 Q6ZSN1 163 aa9.62□□□□□ -0.87
RPAIN-209ENST00000571558 IGHV3-73A0A0B4J1V6 119 aa9.61□□□□□ -0.87
RPAIN-209ENST00000571558 IGHV3-53P01767 116 aa9.61□□□□□ -0.87
RPAIN-209ENST00000571558 FHL2Q14192 279 aa9.61□□□□□ -0.87
RPAIN-209ENST00000571558 MRPL51Q4U2R6 128 aaKnown RBP9.61□□□□□ -0.87
RPAIN-209ENST00000571558 MRPL18Q9H0U6 180 aaKnown RBP9.61□□□□□ -0.87
RPAIN-209ENST00000571558 PHOX2AO14813 284 aa9.6□□□□□ -0.87
RPAIN-209ENST00000571558 CDK2AP2O75956 126 aa9.6□□□□□ -0.87
RPAIN-209ENST00000571558 APCSP02743 223 aa9.6□□□□□ -0.87
RPAIN-209ENST00000571558 MGPP08493 103 aa9.6□□□□□ -0.87
RPAIN-209ENST00000571558 HOXA5P20719 270 aa9.6□□□□□ -0.87
RPAIN-209ENST00000571558 Q6ZTC4 211 aa9.6□□□□□ -0.87
RPAIN-209ENST00000571558 GAS8-AS1O95177 125 aa9.59□□□□□ -0.87
RPAIN-209ENST00000571558 ATP5G1P05496 136 aa9.59□□□□□ -0.87
RPAIN-209ENST00000571558 GATA1P15976 413 aaPredicted RBP9.59□□□□□ -0.87
RPAIN-209ENST00000571558 RPS10P46783 165 aaKnown RBP9.59□□□□□ -0.87
RPAIN-209ENST00000571558 SUMO4Q6EEV6 95 aa9.59□□□□□ -0.87
RPAIN-209ENST00000571558 FRZBQ92765 325 aa9.59□□□□□ -0.87
RPAIN-209ENST00000571558 TRAPPC1Q9Y5R8 145 aa9.59□□□□□ -0.87
RPAIN-209ENST00000571558 TRAV26-2A0A0B4J265 109 aa9.58□□□□□ -0.88
RPAIN-209ENST00000571558 M0QY20 66 aa9.58□□□□□ -0.88
RPAIN-209ENST00000571558 FABP9Q0Z7S8 132 aa9.58□□□□□ -0.88
RPAIN-209ENST00000571558 ZNF56Q15929 161 aa9.58□□□□□ -0.88
RPAIN-209ENST00000571558 MRAP2Q96G30 205 aa9.58□□□□□ -0.88
RPAIN-209ENST00000571558 SLC25A29Q8N8R3 303 aa9.57□□□□□ -0.88
RPAIN-209ENST00000571558 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.57□□□□□ -0.88
RPAIN-209ENST00000571558 HSPG2P98160 4391 aa9.57□□□□□ -0.88
RPAIN-209ENST00000571558 DEFB131BA0A096LNP1 70 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 TRGV4A0A0C4DH28 118 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 D6R8Y8 96 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 F5H697 171 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 SMKR1H3BMG3 65 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 M0R2N4 97 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 NCR2O95944 276 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 TRGC2P03986 189 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 KIAA1644Q3SXP7 199 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 Q6ZR54 194 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 NRACQ8N912 160 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 Q9UF83 564 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 TRBV6-4A0A1B0GX49 114 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 PPBPP02775 128 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 CRYBA4P53673 196 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 ALKBH7Q9BT30 221 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-209ENST00000571558 HHLA3Q9XRX5 114 aa9.56□□□□□ -0.88
RPAIN-209ENST00000571558 F5H768 121 aa9.55□□□□□ -0.88
RPAIN-209ENST00000571558 K7EQD1 137 aa9.55□□□□□ -0.88
RPAIN-209ENST00000571558 CKS2P33552 79 aa9.55□□□□□ -0.88
RPAIN-209ENST00000571558 ORMDL3Q8N138 153 aa9.55□□□□□ -0.88
RPAIN-209ENST00000571558 RPL39LQ96EH5 51 aaKnown RBP9.55□□□□□ -0.88
RPAIN-209ENST00000571558 VSIG2Q96IQ7 327 aa9.55□□□□□ -0.88
RPAIN-209ENST00000571558 PRO0255Q9UI72 69 aa9.55□□□□□ -0.88
RPAIN-209ENST00000571558 TRBV10-1A0A0K0K1A3 114 aa9.54□□□□□ -0.88
RPAIN-209ENST00000571558 TRBV6-5A0A0K0K1A5 114 aa9.54□□□□□ -0.88
RPAIN-209ENST00000571558 HTN3P15516 51 aa9.54□□□□□ -0.88
RPAIN-209ENST00000571558 MAPKAPK5-AS1Q8N8E1 139 aa9.54□□□□□ -0.88
RPAIN-209ENST00000571558 PRELID3AQ96N28 172 aa9.54□□□□□ -0.88
RPAIN-209ENST00000571558 H7C1H1 209 aa9.53□□□□□ -0.88
RPAIN-209ENST00000571558 NPYP01303 97 aa9.53□□□□□ -0.88
RPAIN-209ENST00000571558 RHOHQ15669 191 aa9.53□□□□□ -0.88
RPAIN-209ENST00000571558 NEXN-AS1Q8NBZ9 246 aa9.53□□□□□ -0.88
RPAIN-209ENST00000571558 NIT2Q9NQR4 276 aa9.53□□□□□ -0.88
RPAIN-209ENST00000571558 LAMTOR2Q9Y2Q5 125 aa9.53□□□□□ -0.88
RPAIN-209ENST00000571558 HERC1Q15751 4861 aa9.52□□□□□ -0.89
RPAIN-209ENST00000571558 TRAV26-1A0A087WT03 109 aa9.52□□□□□ -0.89
RPAIN-209ENST00000571558 LOC100131303A0A0U1RQF7 123 aa9.52□□□□□ -0.89
RPAIN-209ENST00000571558 TNFRSF6BO95407 300 aa9.52□□□□□ -0.89
RPAIN-209ENST00000571558 LINC00694P0DN24 101 aa9.52□□□□□ -0.89
RPAIN-209ENST00000571558 SRIP30626 198 aa9.52□□□□□ -0.89
RPAIN-209ENST00000571558 C1orf134Q5TEV5 83 aa9.52□□□□□ -0.89
RPAIN-209ENST00000571558 PAX4O43316 350 aa9.51□□□□□ -0.89
RPAIN-209ENST00000571558 PPP1R17O96001 155 aa9.51□□□□□ -0.89
RPAIN-209ENST00000571558 OR10J3Q5JRS4 329 aa9.51□□□□□ -0.89
RPAIN-209ENST00000571558 Q8N1X5 172 aa9.51□□□□□ -0.89
RPAIN-209ENST00000571558 DNAJC30Q96LL9 226 aa9.51□□□□□ -0.89
RPAIN-209ENST00000571558 A0A0J9YY99 117 aa9.5□□□□□ -0.89
RPAIN-209ENST00000571558 PRSS47A8MTI9 375 aa9.5□□□□□ -0.89
RPAIN-209ENST00000571558 C16orf90A8MZG2 172 aa9.5□□□□□ -0.89
RPAIN-209ENST00000571558 H3BNG1 76 aa9.5□□□□□ -0.89
RPAIN-209ENST00000571558 UBE2DNLQ8IWF7 75 aa9.5□□□□□ -0.89
RPAIN-209ENST00000571558 C20orf78Q9BR46 151 aa9.5□□□□□ -0.89
RPAIN-209ENST00000571558 PRADC1Q9BSG0 188 aa9.5□□□□□ -0.89
RPAIN-209ENST00000571558 TRBV7-3A0A075B6L6 115 aa9.49□□□□□ -0.89
RPAIN-209ENST00000571558 POLR2KP53803 58 aaKnown RBP9.49□□□□□ -0.89
RPAIN-209ENST00000571558 C18orf32Q8TCD1 76 aa9.49□□□□□ -0.89
RPAIN-209ENST00000571558 TMEM70Q9BUB7 260 aa9.49□□□□□ -0.89
RPAIN-209ENST00000571558 TMA7Q9Y2S6 64 aaKnown RBP9.49□□□□□ -0.89
RPAIN-209ENST00000571558 HIST1H2BKO60814 126 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 HIST1H2BJP06899 126 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 GYPEP15421 78 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 HIST1H2BOP23527 126 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 HIST1H2BBP33778 126 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 HIST1H2BDP58876 126 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 UBE2D3P61077 147 aa9.48□□□□□ -0.89
RPAIN-209ENST00000571558 SUMO2P61956 95 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms