RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 RHODO00212 210 aa10.45□□□□□ -0.74
RAB40B-203ENST00000570676 MGPP08493 103 aa10.45□□□□□ -0.74
RAB40B-203ENST00000570676 GATD1Q8NB37 220 aa10.45□□□□□ -0.74
RAB40B-203ENST00000570676 KRTAP17-1Q9BYP8 105 aa10.45□□□□□ -0.74
RAB40B-203ENST00000570676 KIF25-AS1Q9Y6Z4 181 aa10.45□□□□□ -0.74
RAB40B-203ENST00000570676 DYNC1H1Q14204 4646 aaKnown RBP10.45□□□□□ -0.74
RAB40B-203ENST00000570676 ZFP2Q6ZN57 461 aa10.44□□□□□ -0.74
RAB40B-203ENST00000570676 VSIG2Q96IQ7 327 aa10.44□□□□□ -0.74
RAB40B-203ENST00000570676 TRGV4A0A0C4DH28 118 aa10.43□□□□□ -0.74
RAB40B-203ENST00000570676 CIDEAO60543 219 aa10.43□□□□□ -0.74
RAB40B-203ENST00000570676 LINC00315P59091 139 aa10.43□□□□□ -0.74
RAB40B-203ENST00000570676 ZNF56Q15929 161 aa10.43□□□□□ -0.74
RAB40B-203ENST00000570676 COX19Q49B96 90 aa10.43□□□□□ -0.74
RAB40B-203ENST00000570676 UFSP1Q6NVU6 142 aa10.43□□□□□ -0.74
RAB40B-203ENST00000570676 TMEM136Q6ZRR5 245 aa10.43□□□□□ -0.74
RAB40B-203ENST00000570676 AMN1Q8IY45 258 aa10.43□□□□□ -0.74
RAB40B-203ENST00000570676 C6orf223Q8N319 242 aa10.43□□□□□ -0.74
RAB40B-203ENST00000570676 UPK3BQ9BT76 320 aa10.43□□□□□ -0.74
RAB40B-203ENST00000570676 KRTAP1-5Q9BYS1 174 aa10.43□□□□□ -0.74
RAB40B-203ENST00000570676 COLCA2A8K830 154 aa10.42□□□□□ -0.74
RAB40B-203ENST00000570676 F5H697 171 aa10.42□□□□□ -0.74
RAB40B-203ENST00000570676 TNP2Q05952 138 aa10.42□□□□□ -0.74
RAB40B-203ENST00000570676 FHL2Q14192 279 aa10.42□□□□□ -0.74
RAB40B-203ENST00000570676 ESRGQ1W209 222 aa10.42□□□□□ -0.74
RAB40B-203ENST00000570676 FAM104BQ5XKR9 115 aa10.42□□□□□ -0.74
RAB40B-203ENST00000570676 GNB1LQ9BYB4 327 aa10.42□□□□□ -0.74
RAB40B-203ENST00000570676 MRPS16Q9Y3D3 137 aaKnown RBP10.42□□□□□ -0.74
RAB40B-203ENST00000570676 HLA-DQA1P01909 254 aa10.41□□□□□ -0.74
RAB40B-203ENST00000570676 RAB4AP20338 218 aa10.41□□□□□ -0.74
RAB40B-203ENST00000570676 Q6ZSN1 163 aa10.41□□□□□ -0.74
RAB40B-203ENST00000570676 RNF185Q96GF1 192 aa10.41□□□□□ -0.74
RAB40B-203ENST00000570676 Q9H8V8 135 aa10.41□□□□□ -0.74
RAB40B-203ENST00000570676 A0A096LPF7 62 aa10.4□□□□□ -0.74
RAB40B-203ENST00000570676 MT-ND6P03923 174 aa10.4□□□□□ -0.74
RAB40B-203ENST00000570676 SUMO4Q6EEV6 95 aa10.4□□□□□ -0.74
RAB40B-203ENST00000570676 APCSP02743 223 aa10.39□□□□□ -0.75
RAB40B-203ENST00000570676 GATA1P15976 413 aaPredicted RBP10.39□□□□□ -0.75
RAB40B-203ENST00000570676 RAB5AP20339 215 aa10.39□□□□□ -0.75
RAB40B-203ENST00000570676 SLAQ13239 276 aa10.39□□□□□ -0.75
RAB40B-203ENST00000570676 MRPL51Q4U2R6 128 aaKnown RBP10.39□□□□□ -0.75
RAB40B-203ENST00000570676 FRZBQ92765 325 aa10.39□□□□□ -0.75
RAB40B-203ENST00000570676 MRPL18Q9H0U6 180 aaKnown RBP10.39□□□□□ -0.75
RAB40B-203ENST00000570676 TRAPPC1Q9Y5R8 145 aa10.39□□□□□ -0.75
RAB40B-203ENST00000570676 TRAV26-2A0A0B4J265 109 aa10.38□□□□□ -0.75
RAB40B-203ENST00000570676 RPS10P46783 165 aaKnown RBP10.38□□□□□ -0.75
RAB40B-203ENST00000570676 TTC32Q5I0X7 151 aa10.38□□□□□ -0.75
RAB40B-203ENST00000570676 SLC25A29Q8N8R3 303 aa10.38□□□□□ -0.75
RAB40B-203ENST00000570676 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.38□□□□□ -0.75
RAB40B-203ENST00000570676 MRAP2Q96G30 205 aa10.38□□□□□ -0.75
RAB40B-203ENST00000570676 PRO0255Q9UI72 69 aa10.38□□□□□ -0.75
RAB40B-203ENST00000570676 HHLA3Q9XRX5 114 aa10.38□□□□□ -0.75
RAB40B-203ENST00000570676 RYR1P21817 5038 aa10.37□□□□□ -0.75
RAB40B-203ENST00000570676 TRBV6-4A0A1B0GX49 114 aa10.37□□□□□ -0.75
RAB40B-203ENST00000570676 K7EQD1 137 aa10.37□□□□□ -0.75
RAB40B-203ENST00000570676 CRYBA4P53673 196 aa10.37□□□□□ -0.75
RAB40B-203ENST00000570676 FABP9Q0Z7S8 132 aa10.37□□□□□ -0.75
RAB40B-203ENST00000570676 PCLOQ9Y6V0 5065 aa10.37□□□□□ -0.75
RAB40B-203ENST00000570676 SMKR1H3BMG3 65 aa10.36□□□□□ -0.75
RAB40B-203ENST00000570676 H7C1H1 209 aa10.36□□□□□ -0.75
RAB40B-203ENST00000570676 M0QY20 66 aa10.36□□□□□ -0.75
RAB40B-203ENST00000570676 PAX4O43316 350 aa10.36□□□□□ -0.75
RAB40B-203ENST00000570676 NCR2O95944 276 aa10.36□□□□□ -0.75
RAB40B-203ENST00000570676 CKS2P33552 79 aa10.36□□□□□ -0.75
RAB40B-203ENST00000570676 ICOSQ9Y6W8 199 aa10.36□□□□□ -0.75
RAB40B-203ENST00000570676 D6R8Y8 96 aa10.35□□□□□ -0.75
RAB40B-203ENST00000570676 GAS8-AS1O95177 125 aa10.35□□□□□ -0.75
RAB40B-203ENST00000570676 RHOHQ15669 191 aa10.35□□□□□ -0.75
RAB40B-203ENST00000570676 KIAA1644Q3SXP7 199 aa10.35□□□□□ -0.75
RAB40B-203ENST00000570676 PRADC1Q9BSG0 188 aa10.35□□□□□ -0.75
RAB40B-203ENST00000570676 PPBPP02775 128 aa10.34□□□□□ -0.75
RAB40B-203ENST00000570676 ORMDL3Q8N138 153 aa10.34□□□□□ -0.75
RAB40B-203ENST00000570676 Q9UF83 564 aa10.34□□□□□ -0.75
RAB40B-203ENST00000570676 TRBV10-1A0A0K0K1A3 114 aa10.33□□□□□ -0.76
RAB40B-203ENST00000570676 LOC100131303A0A0U1RQF7 123 aa10.33□□□□□ -0.76
RAB40B-203ENST00000570676 TRGC2P03986 189 aa10.33□□□□□ -0.76
RAB40B-203ENST00000570676 OR10J3Q5JRS4 329 aa10.33□□□□□ -0.76
RAB40B-203ENST00000570676 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
RAB40B-203ENST00000570676 PRELID3AQ96N28 172 aa10.33□□□□□ -0.76
RAB40B-203ENST00000570676 NIT2Q9NQR4 276 aa10.33□□□□□ -0.76
RAB40B-203ENST00000570676 GAGE12JA6NER3 117 aa10.32□□□□□ -0.76
RAB40B-203ENST00000570676 GYPEP15421 78 aa10.32□□□□□ -0.76
RAB40B-203ENST00000570676 GAGE1Q13065 139 aa10.32□□□□□ -0.76
RAB40B-203ENST00000570676 GAGE4Q13068 117 aa10.32□□□□□ -0.76
RAB40B-203ENST00000570676 GAGE5Q13069 117 aa10.32□□□□□ -0.76
RAB40B-203ENST00000570676 GAGE13Q4V321 117 aa10.32□□□□□ -0.76
RAB40B-203ENST00000570676 NRACQ8N912 160 aa10.32□□□□□ -0.76
RAB40B-203ENST00000570676 NEXN-AS1Q8NBZ9 246 aa10.32□□□□□ -0.76
RAB40B-203ENST00000570676 SIVA1O15304 175 aa10.31□□□□□ -0.76
RAB40B-203ENST00000570676 TNFRSF6BO95407 300 aa10.31□□□□□ -0.76
RAB40B-203ENST00000570676 PPP1R17O96001 155 aa10.31□□□□□ -0.76
RAB40B-203ENST00000570676 NPYP01303 97 aa10.31□□□□□ -0.76
RAB40B-203ENST00000570676 BTF3P20290 206 aaKnown RBP10.31□□□□□ -0.76
RAB40B-203ENST00000570676 RPL36AP83881 106 aaKnown RBP10.31□□□□□ -0.76
RAB40B-203ENST00000570676 Q6ZRN7 208 aaPredicted RBP10.31□□□□□ -0.76
RAB40B-203ENST00000570676 RPL36ALQ969Q0 106 aaKnown RBP10.31□□□□□ -0.76
RAB40B-203ENST00000570676 DNAJC30Q96LL9 226 aa10.31□□□□□ -0.76
RAB40B-203ENST00000570676 TNFRSF18Q9Y5U5 241 aa10.31□□□□□ -0.76
RAB40B-203ENST00000570676 C16orf90A8MZG2 172 aa10.3□□□□□ -0.76
RAB40B-203ENST00000570676 SRIP30626 198 aa10.3□□□□□ -0.76
RAB40B-203ENST00000570676 MRPL23Q16540 153 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms