RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CRYGDP07320 174 aa4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 GATA1P15976 413 aaPredicted RBP4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 RPL36AP83881 106 aaKnown RBP4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 OR10J3Q5JRS4 329 aa4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 SUMO4Q6EEV6 95 aa4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 GATD1Q8NB37 220 aa4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 RPL36ALQ969Q0 106 aaKnown RBP4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 YPEL4Q96NS1 127 aa4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 AGRNO00468 2067 aa4.66□□□□□ -1.66
CTDNEP1-204ENST00000570484 TRAV26-1A0A087WT03 109 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 A0A0J9YY99 117 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 TRBV10-1A0A0K0K1A3 114 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 NUPR2A6NF83 97 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 COLCA2A8K830 154 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 RAB4AP20338 218 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 SRIP30626 198 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 MRPL51Q4U2R6 128 aaKnown RBP4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 UFSP1Q6NVU6 142 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 POM121L12Q8N7R1 296 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 SLC25A29Q8N8R3 303 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 PRELID3AQ96N28 172 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 EDA2RQ9HAV5 297 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 HHLA3Q9XRX5 114 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 LAMTOR2Q9Y2Q5 125 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 TNFRSF18Q9Y5U5 241 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 ICOSQ9Y6W8 199 aa4.65□□□□□ -1.67
CTDNEP1-204ENST00000570484 GAGE12JA6NER3 117 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 C1orf196B1AJZ1 125 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 SMKR1H3BMG3 65 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 TRGC2P03986 189 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 GYPEP15421 78 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 PMCHP20382 165 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 HOXA5P20719 270 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 GAGE1Q13065 139 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 GAGE4Q13068 117 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 GAGE5Q13069 117 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 FHL2Q14192 279 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 KIAA1644Q3SXP7 199 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 GAGE13Q4V321 117 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 PHLDA1Q8WV24 401 aaPredicted RBP4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 RNF185Q96GF1 192 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 MAP1LC3AQ9H492 121 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 ST20Q9HBF5 79 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 NIT2Q9NQR4 276 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 KLK5Q9Y337 293 aaPredicted RBP4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 KIF25-AS1Q9Y6Z4 181 aa4.64□□□□□ -1.67
CTDNEP1-204ENST00000570484 M0QY20 66 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 PHOX2AO14813 284 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 TNFRSF6BO95407 300 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 NUDT3O95989 172 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 NPYP01303 97 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 CRYBA4P53673 196 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 LINC00315P59091 139 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 RAB5BP61020 215 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 SUMO2P61956 95 aaKnown RBP4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 MRPL23Q16540 153 aaKnown RBP4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 SH2D6Q7Z4S9 175 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 C15orf53Q8NAA6 179 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 NEXN-AS1Q8NBZ9 246 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 RPL39LQ96EH5 51 aaKnown RBP4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 DNAJC30Q96LL9 226 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 WWC2-AS2Q96NR7 200 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 FBN3Q75N90 2809 aa4.63□□□□□ -1.67
CTDNEP1-204ENST00000570484 CMYA5Q8N3K9 4069 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 TRBV7-3A0A075B6L6 115 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 LOC100131303A0A0U1RQF7 123 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 SDHAF1A6NFY7 115 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 IGLL5B9A064 214 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 H3BNG1 76 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 TCAPO15273 167 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 P0DMU3 169 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 FAM231AP0DMU4 169 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 FAM231CP0DMU5 169 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 FCER1GP30273 86 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 Q6ZSN1 163 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 FA2HQ7L5A8 372 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 ZNRF2Q8NHG8 242 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 MUC7Q8TAX7 377 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 KIR2DL4Q99706 377 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 C20orf78Q9BR46 151 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 NXT2Q9NPJ8 142 aaKnown RBP4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 DNAH3Q8TD57 4116 aa4.62□□□□□ -1.67
CTDNEP1-204ENST00000570484 A0A096LPF7 62 aa4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 TRBV6-5A0A0K0K1A5 114 aa4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 LOC389332A0A1B0GUA5 103 aa4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 COTL1Q14019 142 aa4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 TMEM97Q5BJF2 176 aa4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 RNASEKQ6P5S7 137 aaKnown RBP4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 CEMP1Q6PRD7 247 aaPredicted RBP4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 NEGR1Q7Z3B1 354 aa4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 DAZ4Q86SG3 579 aaKnown RBP4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 BAGE3Q86Y29 109 aa4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 NRACQ8N912 160 aa4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 ATP6V0E2Q8NHE4 81 aa4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 PRSS3P2Q8NHM4 247 aa4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 VSIG2Q96IQ7 327 aa4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 ALKBH7Q9BT30 221 aaPredicted RBP4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 SMIM2Q9BVW6 85 aa4.61□□□□□ -1.67
CTDNEP1-204ENST00000570484 DAZ3Q9NR90 486 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms