RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 XCL2Q9UBD3 114 aa11.33□□□□□ -0.6
SNX20-204ENST00000568993 FLNBO75369 2602 aaKnown RBP11.33□□□□□ -0.6
SNX20-204ENST00000568993 M0R2P5 195 aa11.33□□□□□ -0.6
SNX20-204ENST00000568993 HTN1P15515 57 aa11.33□□□□□ -0.6
SNX20-204ENST00000568993 ORMDL2Q53FV1 153 aa11.33□□□□□ -0.6
SNX20-204ENST00000568993 POLR2KP53803 58 aaKnown RBP11.32□□□□□ -0.6
SNX20-204ENST00000568993 C1orf158Q8N1D5 194 aa11.32□□□□□ -0.6
SNX20-204ENST00000568993 ST20Q9HBF5 79 aa11.32□□□□□ -0.6
SNX20-204ENST00000568993 F5H697 171 aa11.31□□□□□ -0.6
SNX20-204ENST00000568993 G3V4G9 280 aa11.31□□□□□ -0.6
SNX20-204ENST00000568993 M0QY20 66 aa11.31□□□□□ -0.6
SNX20-204ENST00000568993 IGLC3P0DOY3 106 aa11.31□□□□□ -0.6
SNX20-204ENST00000568993 IGLL1P15814 213 aa11.31□□□□□ -0.6
SNX20-204ENST00000568993 EDA2RQ9HAV5 297 aa11.31□□□□□ -0.6
SNX20-204ENST00000568993 PRM2P04554 102 aa11.31□□□□□ -0.6
SNX20-204ENST00000568993 INSL3P51460 131 aa11.31□□□□□ -0.6
SNX20-204ENST00000568993 FAM74A4Q5TZK3 123 aa11.31□□□□□ -0.6
SNX20-204ENST00000568993 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.31□□□□□ -0.6
SNX20-204ENST00000568993 CITED1Q99966 193 aa11.31□□□□□ -0.6
SNX20-204ENST00000568993 MCRIP2Q9BUT9 160 aaKnown RBP11.31□□□□□ -0.6
SNX20-204ENST00000568993 TNFRSF18Q9Y5U5 241 aa11.31□□□□□ -0.6
SNX20-204ENST00000568993 A8MWV9 139 aa11.3□□□□□ -0.6
SNX20-204ENST00000568993 ATP5LO75964 103 aa11.3□□□□□ -0.6
SNX20-204ENST00000568993 F8P00451 2351 aa11.3□□□□□ -0.6
SNX20-204ENST00000568993 GIG44P09565 113 aaPredicted RBP11.3□□□□□ -0.6
SNX20-204ENST00000568993 ZNF56Q15929 161 aa11.3□□□□□ -0.6
SNX20-204ENST00000568993 UFSP1Q6NVU6 142 aa11.3□□□□□ -0.6
SNX20-204ENST00000568993 UQCR10Q9UDW1 63 aa11.3□□□□□ -0.6
SNX20-204ENST00000568993 JMJD1CQ15652 2540 aa11.29□□□□□ -0.6
SNX20-204ENST00000568993 VCYO14598 125 aa11.29□□□□□ -0.6
SNX20-204ENST00000568993 NUDT3O95989 172 aa11.29□□□□□ -0.6
SNX20-204ENST00000568993 C18orf15Q96N68 181 aa11.29□□□□□ -0.6
SNX20-204ENST00000568993 TRBV27A0A0K0K1C4 114 aa11.28□□□□□ -0.6
SNX20-204ENST00000568993 HERV-K104P63124 156 aa11.28□□□□□ -0.6
SNX20-204ENST00000568993 MORN3Q6PF18 240 aaPredicted RBP11.28□□□□□ -0.6
SNX20-204ENST00000568993 IL17DQ8TAD2 202 aa11.28□□□□□ -0.6
SNX20-204ENST00000568993 TOMM6Q96B49 74 aa11.28□□□□□ -0.6
SNX20-204ENST00000568993 VAMP3Q15836 100 aa11.28□□□□□ -0.6
SNX20-204ENST00000568993 Q6ZVH6 145 aa11.28□□□□□ -0.6
SNX20-204ENST00000568993 PMCHL2Q9BQD1 86 aa11.28□□□□□ -0.6
SNX20-204ENST00000568993 hDV102S1A0JD36 115 aa11.27□□□□□ -0.61
SNX20-204ENST00000568993 SDHAF1A6NFY7 115 aa11.27□□□□□ -0.61
SNX20-204ENST00000568993 CKS1BP61024 79 aa11.27□□□□□ -0.61
SNX20-204ENST00000568993 WFDC10AQ9H1F0 79 aa11.27□□□□□ -0.61
SNX20-204ENST00000568993 TSPAN13O95857 204 aa11.26□□□□□ -0.61
SNX20-204ENST00000568993 AZU1P20160 251 aa11.26□□□□□ -0.61
SNX20-204ENST00000568993 C9orf66Q5T8R8 295 aa11.26□□□□□ -0.61
SNX20-204ENST00000568993 C1QTNF4Q9BXJ3 329 aa11.26□□□□□ -0.61
SNX20-204ENST00000568993 ZMAT4Q9H898 229 aa11.26□□□□□ -0.61
SNX20-204ENST00000568993 NACAE9PAV3 2078 aa11.26□□□□□ -0.61
SNX20-204ENST00000568993 LINC01549A6NIU2 74 aa11.26□□□□□ -0.61
SNX20-204ENST00000568993 H7C1H1 209 aa11.26□□□□□ -0.61
SNX20-204ENST00000568993 KIR2DL4Q99706 377 aa11.26□□□□□ -0.61
SNX20-204ENST00000568993 CFAP126Q5VTH2 177 aa11.25□□□□□ -0.61
SNX20-204ENST00000568993 TENM1Q9UKZ4 2725 aa11.25□□□□□ -0.61
SNX20-204ENST00000568993 RHODO00212 210 aa11.25□□□□□ -0.61
SNX20-204ENST00000568993 RS1O15537 224 aa11.25□□□□□ -0.61
SNX20-204ENST00000568993 PRSS1P07477 247 aa11.25□□□□□ -0.61
SNX20-204ENST00000568993 CSNK1G2-AS1Q8NCQ2 148 aa11.25□□□□□ -0.61
SNX20-204ENST00000568993 TMEM263Q8WUH6 116 aaKnown RBP11.25□□□□□ -0.61
SNX20-204ENST00000568993 GAGE12BA1L429 117 aa11.24□□□□□ -0.61
SNX20-204ENST00000568993 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.24□□□□□ -0.61
SNX20-204ENST00000568993 C2orf66Q6UXQ4 117 aa11.24□□□□□ -0.61
SNX20-204ENST00000568993 ZFP2Q6ZN57 461 aa11.24□□□□□ -0.61
SNX20-204ENST00000568993 TEP1Q99973 2627 aaKnown RBP11.24□□□□□ -0.61
SNX20-204ENST00000568993 DKK2Q9UBU2 259 aa11.24□□□□□ -0.61
SNX20-204ENST00000568993 RPL35AP18077 110 aaKnown RBP11.23□□□□□ -0.61
SNX20-204ENST00000568993 NEGR1Q7Z3B1 354 aa11.23□□□□□ -0.61
SNX20-204ENST00000568993 MTURNQ8N3F0 131 aa11.23□□□□□ -0.61
SNX20-204ENST00000568993 SCGB3A1Q96QR1 104 aa11.23□□□□□ -0.61
SNX20-204ENST00000568993 IGHV3OR16-12A0A075B7B8 117 aa11.23□□□□□ -0.61
SNX20-204ENST00000568993 TRAV12-1A0A0B4J245 112 aa11.23□□□□□ -0.61
SNX20-204ENST00000568993 MRPL16Q9NX20 251 aaKnown RBP11.23□□□□□ -0.61
SNX20-204ENST00000568993 ATRQ13535 2644 aa11.22□□□□□ -0.61
SNX20-204ENST00000568993 Q6ZN92 141 aa11.22□□□□□ -0.61
SNX20-204ENST00000568993 ERASQ7Z444 233 aa11.22□□□□□ -0.61
SNX20-204ENST00000568993 OR11H2Q8NH07 326 aa11.22□□□□□ -0.61
SNX20-204ENST00000568993 SPATA3Q8NHX4 192 aa11.22□□□□□ -0.61
SNX20-204ENST00000568993 MRPS16Q9Y3D3 137 aaKnown RBP11.22□□□□□ -0.61
SNX20-204ENST00000568993 VWFP04275 2813 aa11.22□□□□□ -0.61
SNX20-204ENST00000568993 HNRNPA3P51991 378 aaKnown RBP11.21□□□□□ -0.61
SNX20-204ENST00000568993 DAZ2Q13117 558 aaKnown RBP11.21□□□□□ -0.61
SNX20-204ENST00000568993 RHOHQ15669 191 aa11.21□□□□□ -0.61
SNX20-204ENST00000568993 GTSCR1Q86UQ5 136 aa11.21□□□□□ -0.61
SNX20-204ENST00000568993 WFDC9Q8NEX5 89 aa11.21□□□□□ -0.61
SNX20-204ENST00000568993 CYSLTR1Q9Y271 337 aa11.21□□□□□ -0.61
SNX20-204ENST00000568993 A0A087WX48 190 aa11.21□□□□□ -0.62
SNX20-204ENST00000568993 IGHV3-53P01767 116 aa11.21□□□□□ -0.62
SNX20-204ENST00000568993 A4D1N5 150 aa11.2□□□□□ -0.62
SNX20-204ENST00000568993 I3L3M4 83 aa11.2□□□□□ -0.62
SNX20-204ENST00000568993 C16orf74Q96GX8 76 aa11.2□□□□□ -0.62
SNX20-204ENST00000568993 SIGMAR1Q99720 223 aa11.2□□□□□ -0.62
SNX20-204ENST00000568993 IGHV3-73A0A0B4J1V6 119 aa11.19□□□□□ -0.62
SNX20-204ENST00000568993 Q6ZSN1 163 aa11.19□□□□□ -0.62
SNX20-204ENST00000568993 NEXN-AS1Q8NBZ9 246 aa11.19□□□□□ -0.62
SNX20-204ENST00000568993 HHLA3Q9XRX5 114 aa11.19□□□□□ -0.62
SNX20-204ENST00000568993 PLAC8L1A1L4L8 177 aa11.19□□□□□ -0.62
SNX20-204ENST00000568993 IGIPA6NJ69 53 aa11.19□□□□□ -0.62
SNX20-204ENST00000568993 DPM2O94777 84 aa11.19□□□□□ -0.62
SNX20-204ENST00000568993 TSHBP01222 138 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms