RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 GSN-AS1Q9NRJ2 163 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 ZMAT5Q9UDW3 170 aaKnown RBP4.45□□□□□ -1.7
CAPN3-218ENST00000568153 GOLT1BQ9Y3E0 138 aa4.45□□□□□ -1.7
CAPN3-218ENST00000568153 CUBNO60494 3623 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 IGHV3OR16-12A0A075B7B8 117 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 PRM2P04554 102 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 MGPP08493 103 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 GIG44P09565 113 aaPredicted RBP4.44□□□□□ -1.7
CAPN3-218ENST00000568153 AZU1P20160 251 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 IFI27P40305 119 aaPredicted RBP4.44□□□□□ -1.7
CAPN3-218ENST00000568153 AMTP48728 403 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 FAM19A2Q8N3H0 131 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 POM121L12Q8N7R1 296 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 SPATA3Q8NHX4 192 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 URB1-AS1Q96HZ7 61 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 C12orf57Q99622 126 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 C20orf78Q9BR46 151 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 JPT2Q9H910 190 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 NXT2Q9NPJ8 142 aaKnown RBP4.44□□□□□ -1.7
CAPN3-218ENST00000568153 KIF25-AS1Q9Y6Z4 181 aa4.44□□□□□ -1.7
CAPN3-218ENST00000568153 TRAV26-2A0A0B4J265 109 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 A8MWV9 139 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 GAS8-AS1O95177 125 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 NCR2O95944 276 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 SCGB1D1O95968 90 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 NPYP01303 97 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 CRYGDP07320 174 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 SMIM6P0DI80 62 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 GATA1P15976 413 aaPredicted RBP4.43□□□□□ -1.7
CAPN3-218ENST00000568153 LINC00315P59091 139 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 JOSD1Q15040 202 aaPredicted RBP4.43□□□□□ -1.7
CAPN3-218ENST00000568153 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 Q8N8P6 123 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 CSNK1G2-AS1Q8NCQ2 148 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 NDUFAF3Q9BU61 184 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 WFDC10AQ9H1F0 79 aa4.43□□□□□ -1.7
CAPN3-218ENST00000568153 KIR2DL5BA0A0G2JN68 375 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 KIR2DL5BA0A0G2JPC4 375 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 LINC01546A6NGU7 62 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 VCYO14598 125 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 KRTDAPP60985 99 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 RRN3P1Q2M238 152 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 LGALS9BQ3B8N2 356 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 PYY3Q5JQD4 70 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 KIR2DL5AQ8N109 375 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 C11orf72Q8NBR9 251 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 KIR2DL5BQ8NHK3 375 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 RASL10AQ92737 203 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 ST20Q9HBF5 79 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 NIT2Q9NQR4 276 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 HSPB8Q9UJY1 196 aa4.42□□□□□ -1.7
CAPN3-218ENST00000568153 IGHV1-24A0A0C4DH33 117 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 SMIM9A6NGZ8 99 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 H7C1H1 209 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 RS1O15537 224 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 LEPROTL1O95214 131 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 G0S2P27469 103 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 FCER1GP30273 86 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 APOC4P55056 127 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 DAZ2Q13117 558 aaKnown RBP4.41□□□□□ -1.7
CAPN3-218ENST00000568153 LAGE3Q14657 143 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 PMCHL1Q16048 86 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 FAM74A4Q5TZK3 123 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 ZNF705AQ6ZN79 300 aaPredicted RBP4.41□□□□□ -1.7
CAPN3-218ENST00000568153 RNASE8Q8TDE3 154 aaKnown RBP4.41□□□□□ -1.7
CAPN3-218ENST00000568153 TMEM263Q8WUH6 116 aaKnown RBP4.41□□□□□ -1.7
CAPN3-218ENST00000568153 C16orf74Q96GX8 76 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 OVOL2Q9BRP0 275 aa4.41□□□□□ -1.7
CAPN3-218ENST00000568153 IGLV2-18A0A075B6J9 118 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 TRGV1A0A0A0MS02 117 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 TRBV6-5A0A0K0K1A5 114 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 K7EMI3 77 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 M0QY20 66 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 CIDEAO60543 219 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 C3orf79P0CE67 100 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 RPL32P62910 135 aaKnown RBP4.4□□□□□ -1.71
CAPN3-218ENST00000568153 S100A12P80511 92 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 ZNF56Q15929 161 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 ORMDL2Q53FV1 153 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 CFAP126Q5VTH2 177 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 ZFP2Q6ZN57 461 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 OR4C5Q8NGB2 326 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 RPL39LQ96EH5 51 aaKnown RBP4.4□□□□□ -1.71
CAPN3-218ENST00000568153 TMEM70Q9BUB7 260 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 MAP1LC3CQ9BXW4 147 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 NOP10Q9NPE3 64 aaKnown RBP4.4□□□□□ -1.71
CAPN3-218ENST00000568153 F8P00451 2351 aa4.4□□□□□ -1.71
CAPN3-218ENST00000568153 NSD1Q96L73 2696 aaPredicted RBP4.39□□□□□ -1.71
CAPN3-218ENST00000568153 IGHV3-73A0A0B4J1V6 119 aa4.39□□□□□ -1.71
CAPN3-218ENST00000568153 TCAPO15273 167 aa4.39□□□□□ -1.71
CAPN3-218ENST00000568153 HBDP02042 147 aa4.39□□□□□ -1.71
CAPN3-218ENST00000568153 POLR2KP53803 58 aaKnown RBP4.39□□□□□ -1.71
CAPN3-218ENST00000568153 UFSP1Q6NVU6 142 aa4.39□□□□□ -1.71
CAPN3-218ENST00000568153 PET117Q6UWS5 81 aa4.39□□□□□ -1.71
CAPN3-218ENST00000568153 SMIM2Q9BVW6 85 aa4.39□□□□□ -1.71
CAPN3-218ENST00000568153 MRPL16Q9NX20 251 aaKnown RBP4.39□□□□□ -1.71
CAPN3-218ENST00000568153 SORL1Q92673 2214 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 NIPBLQ6KC79 2804 aaeCLIP4.38□□□□□ -1.71
CAPN3-218ENST00000568153 NBEAL1Q6ZS30 2694 aa4.38□□□□□ -1.71
CAPN3-218ENST00000568153 TRGV2A0A075B6R0 118 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms