RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 MRPL36Q9P0J6 103 aaKnown RBP3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 ATG2AQ2TAZ0 1938 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 ATP5EP56381 51 aaPredicted RBP3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 Q6ZPA2 131 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 Q8N7P7 452 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 C10orf105Q8TEF2 133 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 BBC3Q96PG8 261 aaPredicted RBP3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 CNFNQ9BYD5 112 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 SS18L2Q9UHA2 77 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 TP53TG3Q9ULZ0 132 aa3.32□□□□□ -1.88
LPCAT2-208ENST00000566915 CADP27708 2225 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 TRAV26-1A0A087WT03 109 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 C9orf66Q5T8R8 295 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 Q6Q795 121 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 SPTAN1Q13813 2472 aaKnown RBP3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 DOCK10Q96BY6 2186 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 CACNA1GO43497 2377 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 IGHV4OR15-8A0A075B7B6 117 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 A0A087WW49 117 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 PRAC2D3DTV9 90 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 CCL24O00175 119 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 INSL3P51460 131 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 NDUFV3P56181 108 aaKnown RBP3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 RBX1P62877 108 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 DEFB112Q30KQ8 113 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 GDF5OSQ5U4N7 250 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 DEFB104AQ8WTQ1 72 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 TMEM263Q8WUH6 116 aaKnown RBP3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 NDUFA1O15239 70 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 TCL1BO95988 128 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 GRNP28799 593 aaKnown RBP3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 SEM1Q6ZVN7 128 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 RITA1Q96K30 269 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 PSMG3-AS1Q96PY0 264 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 NOP10Q9NPE3 64 aaKnown RBP3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 NACAE9PAV3 2078 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 E7EUB6 86 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 NDUFC1O43677 76 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 SPART-AS1P0CW21 52 aa3.31□□□□□ -1.88
LPCAT2-208ENST00000566915 A0A0J9YY99 117 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 TRBV27A0A0K0K1C4 114 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 A6NDX4 124 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 TNFRSF13BO14836 293 aaPredicted RBP3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 NREPQ16612 68 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 SPRNQ5BIV9 151 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 C4orf3Q8WVX3 66 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 C1orf43Q9BWL3 253 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 NUP210LQ5VU65 1888 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 FAM240AA0A1B0GVK7 77 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 TMEM223A0PJW6 202 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 SMIM9A6NGZ8 99 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 FRMD6-AS1P0C7T7 363 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 RPL39P62891 51 aaKnown RBP3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 LINC00322Q6ZN03 302 aaPredicted RBP3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 DIRC1Q969H9 104 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 MED13Q9UHV7 2174 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 ETDCA0A1B0GVM5 59 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 IBA57-AS1B1ANH7 110 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 NDUFB1O75438 58 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 XCL1P47992 114 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 GOLGB1Q14789 3259 aaKnown RBP3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 LY6LH3BQJ8 138 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 IGHV4-59P01825 116 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 NFE4Q86UQ8 179 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 TMEM61Q8N0U2 210 aa3.3□□□□□ -1.88
LPCAT2-208ENST00000566915 LECT2O14960 151 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 MRGPRG-AS1Q2M3A8 158 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 ASPHD1Q5U4P2 390 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 DAND5Q8N907 189 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 CAMK2N2Q96S95 79 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 ZMAT4Q9H898 229 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 ARFGEF3Q5TH69 2177 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 ZNF80P51504 273 aaPredicted RBP3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 HIGD2BQ4VC39 106 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 UFSP1Q6NVU6 142 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 SHISA2Q6UWI4 295 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 COX8CQ7Z4L0 72 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 ADAMTS20P59510 1910 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 CFHR3Q02985 330 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 C5orf38Q86SI9 138 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 TTTY13Q9BZ97 58 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 PRO0255Q9UI72 69 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 IGHV4-61A0A0C4DH41 118 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 K7EQG2 157 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 IGHV3-33P01772 117 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 GYPEP15421 78 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 ZNF22P17026 224 aaPredicted RBP3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 RNASE13Q5GAN3 156 aaKnown RBP3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 MIR7-3HGQ8N6C7 128 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 CCDC140Q96MF4 163 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 ZFAND3Q9H8U3 227 aa3.29□□□□□ -1.88
LPCAT2-208ENST00000566915 IGLV2-11P01706 119 aa3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 MRPS36P82909 103 aaKnown RBP3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 CFAP126Q5VTH2 177 aa3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 C2orf91Q6ZV80 131 aa3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 C3orf22Q8N5N4 141 aa3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 RNF185Q96GF1 192 aa3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 MSMPQ1L6U9 139 aa3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 HHLA3Q9XRX5 114 aa3.28□□□□□ -1.88
LPCAT2-208ENST00000566915 TNRC6BQ9UPQ9 1833 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms