RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 ZFP2Q6ZN57 461 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 C2orf91Q6ZV80 131 aa6.42□□□□□ -1.38
LINC01541-201ENST00000566582 F8VRH5 84 aa6.41□□□□□ -1.38
LINC01541-201ENST00000566582 RPL32P62910 135 aaKnown RBP6.41□□□□□ -1.38
LINC01541-201ENST00000566582 TMEM97Q5BJF2 176 aa6.41□□□□□ -1.38
LINC01541-201ENST00000566582 JMJD8Q96S16 334 aa6.41□□□□□ -1.38
LINC01541-201ENST00000566582 NOTCH2Q04721 2471 aa6.41□□□□□ -1.38
LINC01541-201ENST00000566582 IGKV2D-26A0A0A0MRZ7 120 aa6.41□□□□□ -1.38
LINC01541-201ENST00000566582 TRAV12-1A0A0B4J245 112 aa6.41□□□□□ -1.38
LINC01541-201ENST00000566582 M0R2P5 195 aa6.41□□□□□ -1.38
LINC01541-201ENST00000566582 BAALCQ8WXS3 180 aa6.41□□□□□ -1.38
LINC01541-201ENST00000566582 TRBV6-5A0A0K0K1A5 114 aa6.4□□□□□ -1.38
LINC01541-201ENST00000566582 TRBV27A0A0K0K1C4 114 aa6.4□□□□□ -1.38
LINC01541-201ENST00000566582 LY6G6DO95868 133 aa6.4□□□□□ -1.38
LINC01541-201ENST00000566582 RPL39P62891 51 aaKnown RBP6.4□□□□□ -1.38
LINC01541-201ENST00000566582 Q6ZVH6 145 aa6.4□□□□□ -1.38
LINC01541-201ENST00000566582 NEXN-AS1Q8NBZ9 246 aa6.4□□□□□ -1.38
LINC01541-201ENST00000566582 TTTY13Q9BZ97 58 aa6.4□□□□□ -1.38
LINC01541-201ENST00000566582 TRAV8-6A0A0B4J262 113 aa6.4□□□□□ -1.39
LINC01541-201ENST00000566582 LINC01549A6NIU2 74 aa6.4□□□□□ -1.39
LINC01541-201ENST00000566582 A8MWV9 139 aa6.4□□□□□ -1.39
LINC01541-201ENST00000566582 PRSS29PA6NIE9 313 aa6.39□□□□□ -1.39
LINC01541-201ENST00000566582 SIVA1O15304 175 aa6.39□□□□□ -1.39
LINC01541-201ENST00000566582 DLEU1O43261 78 aa6.39□□□□□ -1.39
LINC01541-201ENST00000566582 MORN3Q6PF18 240 aaPredicted RBP6.39□□□□□ -1.39
LINC01541-201ENST00000566582 I3L3M4 83 aa6.39□□□□□ -1.39
LINC01541-201ENST00000566582 PROK1P58294 105 aa6.39□□□□□ -1.39
LINC01541-201ENST00000566582 MRPL16Q9NX20 251 aaKnown RBP6.39□□□□□ -1.39
LINC01541-201ENST00000566582 COX11Q9Y6N1 276 aa6.39□□□□□ -1.39
LINC01541-201ENST00000566582 NDUFA7O95182 113 aa6.38□□□□□ -1.39
LINC01541-201ENST00000566582 P0DMU3 169 aa6.38□□□□□ -1.39
LINC01541-201ENST00000566582 FAM231AP0DMU4 169 aa6.38□□□□□ -1.39
LINC01541-201ENST00000566582 FAM231CP0DMU5 169 aa6.38□□□□□ -1.39
LINC01541-201ENST00000566582 TNFRSF18Q9Y5U5 241 aa6.38□□□□□ -1.39
LINC01541-201ENST00000566582 EMP1P54849 157 aa6.38□□□□□ -1.39
LINC01541-201ENST00000566582 CMC4P56277 68 aaPredicted RBP6.38□□□□□ -1.39
LINC01541-201ENST00000566582 HSD52Q0P140 79 aa6.38□□□□□ -1.39
LINC01541-201ENST00000566582 TMEM141Q96I45 108 aa6.38□□□□□ -1.39
LINC01541-201ENST00000566582 AKAP9Q99996 3911 aa6.38□□□□□ -1.39
LINC01541-201ENST00000566582 IGIPA6NJ69 53 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 NPSP0C0P6 89 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 AZU1P20160 251 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 RIPPLY3P57055 190 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 SEC11AP67812 179 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 PMVKQ15126 192 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 C11orf72Q8NBR9 251 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 ORAOV1Q8WV07 137 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 A6NDN8 102 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 GAGE1Q13065 139 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 RHOHQ15669 191 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 PIK3CD-AS1Q5SR53 167 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 CFAP126Q5VTH2 177 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 C1orf158Q8N1D5 194 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 OR11H2Q8NH07 326 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 TIMM17AQ99595 171 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 LINC00467Q9BRT7 94 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 WFDC10AQ9H1F0 79 aa6.37□□□□□ -1.39
LINC01541-201ENST00000566582 TRBV25-1A0A075B6N4 114 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 INAFM1C9JVW0 142 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 RHODO00212 210 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 TAX1BP3O14907 124 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 TSHBP01222 138 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 IGLV1-51P01701 117 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 RPL35AP18077 110 aaKnown RBP6.36□□□□□ -1.39
LINC01541-201ENST00000566582 VAMP3Q15836 100 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 CHAC1Q9BUX1 264 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 SETXQ7Z333 2677 aaKnown RBP6.36□□□□□ -1.39
LINC01541-201ENST00000566582 NIPBLQ6KC79 2804 aaeCLIP6.36□□□□□ -1.39
LINC01541-201ENST00000566582 TRGV1A0A0A0MS02 117 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 ADARB2-AS1A8MUL3 147 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 GCSHP23434 173 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 PAPPA-AS1Q5QFB9 102 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 CST9LQ9H4G1 147 aa6.36□□□□□ -1.39
LINC01541-201ENST00000566582 PTTG1IPP53801 180 aa6.35□□□□□ -1.39
LINC01541-201ENST00000566582 Q6ZSN1 163 aa6.35□□□□□ -1.39
LINC01541-201ENST00000566582 NDUFA11Q86Y39 141 aa6.35□□□□□ -1.39
LINC01541-201ENST00000566582 MAPKAPK5-AS1Q8N8E1 139 aa6.35□□□□□ -1.39
LINC01541-201ENST00000566582 C20orf203Q8NBC4 194 aa6.35□□□□□ -1.39
LINC01541-201ENST00000566582 OPRPNQ99935 248 aaPredicted RBP6.35□□□□□ -1.39
LINC01541-201ENST00000566582 TMEM170BQ5T4T1 132 aa6.35□□□□□ -1.39
LINC01541-201ENST00000566582 UFSP1Q6NVU6 142 aa6.35□□□□□ -1.39
LINC01541-201ENST00000566582 OR4C5Q8NGB2 326 aa6.35□□□□□ -1.39
LINC01541-201ENST00000566582 PTH2Q96A98 100 aa6.35□□□□□ -1.39
LINC01541-201ENST00000566582 HIGD1BQ9P298 99 aa6.35□□□□□ -1.39
LINC01541-201ENST00000566582 NOTCH3Q9UM47 2321 aa6.35□□□□□ -1.39
LINC01541-201ENST00000566582 C11orf86A6NJI1 115 aa6.34□□□□□ -1.39
LINC01541-201ENST00000566582 HERVK_113P61574 105 aa6.34□□□□□ -1.39
LINC01541-201ENST00000566582 PRADC1Q9BSG0 188 aa6.34□□□□□ -1.39
LINC01541-201ENST00000566582 EDA2RQ9HAV5 297 aa6.34□□□□□ -1.39
LINC01541-201ENST00000566582 Q9UF83 564 aa6.34□□□□□ -1.39
LINC01541-201ENST00000566582 JMJD1CQ15652 2540 aa6.34□□□□□ -1.39
LINC01541-201ENST00000566582 IGLV4-69A0A075B6H9 119 aa6.34□□□□□ -1.4
LINC01541-201ENST00000566582 E9PLD3 99 aa6.34□□□□□ -1.4
LINC01541-201ENST00000566582 KRTAP10-3P60369 221 aa6.34□□□□□ -1.4
LINC01541-201ENST00000566582 BEAN1Q3B7T3 259 aa6.34□□□□□ -1.4
LINC01541-201ENST00000566582 TMEM263Q8WUH6 116 aaKnown RBP6.34□□□□□ -1.4
LINC01541-201ENST00000566582 PHLDA1Q8WV24 401 aaPredicted RBP6.34□□□□□ -1.4
LINC01541-201ENST00000566582 RAB37Q96AX2 223 aa6.34□□□□□ -1.4
LINC01541-201ENST00000566582 VCX2Q9H322 139 aa6.34□□□□□ -1.4
LINC01541-201ENST00000566582 IGHV3-38A0A0C4DH36 116 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms