RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TRBV27A0A0K0K1C4 114 aa13.72□□□□□ -0.21
MSLN-207ENST00000566549 PROK1P58294 105 aa13.72□□□□□ -0.21
MSLN-207ENST00000566549 P0DMU3 169 aa13.72□□□□□ -0.21
MSLN-207ENST00000566549 FAM231AP0DMU4 169 aa13.72□□□□□ -0.21
MSLN-207ENST00000566549 FAM231CP0DMU5 169 aa13.72□□□□□ -0.21
MSLN-207ENST00000566549 IGIPA6NJ69 53 aa13.71□□□□□ -0.21
MSLN-207ENST00000566549 H3BUT2 72 aa13.71□□□□□ -0.21
MSLN-207ENST00000566549 TRPT1Q86TN4 253 aaKnown RBP13.71□□□□□ -0.21
MSLN-207ENST00000566549 TRBV6-5A0A0K0K1A5 114 aa13.71□□□□□ -0.22
MSLN-207ENST00000566549 OR11H12B2RN74 326 aa13.71□□□□□ -0.22
MSLN-207ENST00000566549 OR11H2Q8NH07 326 aa13.71□□□□□ -0.22
MSLN-207ENST00000566549 HIGD1BQ9P298 99 aa13.71□□□□□ -0.22
MSLN-207ENST00000566549 KRTAP1-1Q07627 177 aa13.7□□□□□ -0.22
MSLN-207ENST00000566549 JMJD8Q96S16 334 aa13.7□□□□□ -0.22
MSLN-207ENST00000566549 H3BRM9 83 aa13.7□□□□□ -0.22
MSLN-207ENST00000566549 K7ERJ3 54 aa13.7□□□□□ -0.22
MSLN-207ENST00000566549 PLA2G2AP14555 144 aa13.7□□□□□ -0.22
MSLN-207ENST00000566549 LINC01587Q99440 93 aa13.7□□□□□ -0.22
MSLN-207ENST00000566549 OPRPNQ99935 248 aaPredicted RBP13.7□□□□□ -0.22
MSLN-207ENST00000566549 CFAP161Q6P656 301 aa13.69□□□□□ -0.22
MSLN-207ENST00000566549 TEX29Q8N6K0 151 aa13.69□□□□□ -0.22
MSLN-207ENST00000566549 CITED2Q99967 270 aaPredicted RBP13.69□□□□□ -0.22
MSLN-207ENST00000566549 TRAV2A0A0B4J234 112 aa13.69□□□□□ -0.22
MSLN-207ENST00000566549 ANK3Q12955 4377 aaKnown RBP13.68□□□□□ -0.22
MSLN-207ENST00000566549 UNC79Q9P2D8 2635 aa13.68□□□□□ -0.22
MSLN-207ENST00000566549 C11orf86A6NJI1 115 aa13.68□□□□□ -0.22
MSLN-207ENST00000566549 A8MTW9 85 aa13.68□□□□□ -0.22
MSLN-207ENST00000566549 CCL24O00175 119 aa13.68□□□□□ -0.22
MSLN-207ENST00000566549 PRADC1Q9BSG0 188 aa13.68□□□□□ -0.22
MSLN-207ENST00000566549 IGLV4-69A0A075B6H9 119 aa13.68□□□□□ -0.22
MSLN-207ENST00000566549 C9orf118A6NHY6 69 aa13.68□□□□□ -0.22
MSLN-207ENST00000566549 XCL2Q9UBD3 114 aa13.68□□□□□ -0.22
MSLN-207ENST00000566549 J3QKU1 62 aa13.67□□□□□ -0.22
MSLN-207ENST00000566549 RIPPLY3P57055 190 aa13.67□□□□□ -0.22
MSLN-207ENST00000566549 PMVKQ15126 192 aa13.67□□□□□ -0.22
MSLN-207ENST00000566549 ODF3L2Q3SX64 289 aa13.67□□□□□ -0.22
MSLN-207ENST00000566549 IGHV3OR16-12A0A075B7B8 117 aa13.66□□□□□ -0.22
MSLN-207ENST00000566549 SPAG8Q99932 426 aaPredicted RBP13.66□□□□□ -0.22
MSLN-207ENST00000566549 CST9LQ9H4G1 147 aa13.66□□□□□ -0.22
MSLN-207ENST00000566549 NHP2Q9NX24 153 aaKnown RBP13.66□□□□□ -0.22
MSLN-207ENST00000566549 Q9UF83 564 aa13.66□□□□□ -0.22
MSLN-207ENST00000566549 CEND1Q8N111 149 aa13.66□□□□□ -0.22
MSLN-207ENST00000566549 MYMXA0A1B0GTQ4 84 aa13.65□□□□□ -0.22
MSLN-207ENST00000566549 HIST1H4GQ99525 98 aa13.65□□□□□ -0.22
MSLN-207ENST00000566549 TIMM17AQ99595 171 aa13.65□□□□□ -0.22
MSLN-207ENST00000566549 MRPL16Q9NX20 251 aaKnown RBP13.65□□□□□ -0.22
MSLN-207ENST00000566549 I3L3M4 83 aa13.65□□□□□ -0.22
MSLN-207ENST00000566549 LINC01006Q8NI28 216 aa13.65□□□□□ -0.22
MSLN-207ENST00000566549 TMEM141Q96I45 108 aa13.65□□□□□ -0.22
MSLN-207ENST00000566549 E9PLD3 99 aa13.64□□□□□ -0.23
MSLN-207ENST00000566549 M0R2P5 195 aa13.64□□□□□ -0.23
MSLN-207ENST00000566549 INSP01308 110 aa13.64□□□□□ -0.23
MSLN-207ENST00000566549 SMIM13P0DJ93 91 aa13.64□□□□□ -0.23
MSLN-207ENST00000566549 ZNF415Q09FC8 603 aa13.64□□□□□ -0.23
MSLN-207ENST00000566549 FHL3Q13643 280 aa13.64□□□□□ -0.23
MSLN-207ENST00000566549 GAGE10A6NGK3 116 aa13.64□□□□□ -0.23
MSLN-207ENST00000566549 NSUN5P1Q3KNT7 163 aa13.64□□□□□ -0.23
MSLN-207ENST00000566549 Q6ZSN1 163 aa13.64□□□□□ -0.23
MSLN-207ENST00000566549 SCGB2A2Q13296 93 aa13.63□□□□□ -0.23
MSLN-207ENST00000566549 TMEM170BQ5T4T1 132 aa13.63□□□□□ -0.23
MSLN-207ENST00000566549 FASNP49327 2511 aaKnown RBP13.63□□□□□ -0.23
MSLN-207ENST00000566549 ZNF815PA8K554 130 aa13.63□□□□□ -0.23
MSLN-207ENST00000566549 STHQ8IWL8 128 aa13.63□□□□□ -0.23
MSLN-207ENST00000566549 ZNRF2Q8NHG8 242 aa13.63□□□□□ -0.23
MSLN-207ENST00000566549 RHOHQ15669 191 aa13.62□□□□□ -0.23
MSLN-207ENST00000566549 LINC01549A6NIU2 74 aa13.62□□□□□ -0.23
MSLN-207ENST00000566549 AZU1P20160 251 aa13.62□□□□□ -0.23
MSLN-207ENST00000566549 C20orf203Q8NBC4 194 aa13.62□□□□□ -0.23
MSLN-207ENST00000566549 C11orf72Q8NBR9 251 aa13.62□□□□□ -0.23
MSLN-207ENST00000566549 RNASE8Q8TDE3 154 aaKnown RBP13.62□□□□□ -0.23
MSLN-207ENST00000566549 TM2D2Q9BX73 214 aa13.62□□□□□ -0.23
MSLN-207ENST00000566549 JMJD1CQ15652 2540 aa13.61□□□□□ -0.23
MSLN-207ENST00000566549 CFAP126Q5VTH2 177 aa13.61□□□□□ -0.23
MSLN-207ENST00000566549 SMR3AQ99954 134 aa13.61□□□□□ -0.23
MSLN-207ENST00000566549 KMT2BQ9UMN6 2715 aaPredicted RBP13.61□□□□□ -0.23
MSLN-207ENST00000566549 A8MWV9 139 aa13.61□□□□□ -0.23
MSLN-207ENST00000566549 PLEKHB2Q96CS7 222 aa13.61□□□□□ -0.23
MSLN-207ENST00000566549 TSSC4Q9Y5U2 329 aaPredicted RBP13.61□□□□□ -0.23
MSLN-207ENST00000566549 UFSP1Q6NVU6 142 aa13.6□□□□□ -0.23
MSLN-207ENST00000566549 SCGB1D4Q6XE38 83 aa13.6□□□□□ -0.23
MSLN-207ENST00000566549 TNFRSF18Q9Y5U5 241 aa13.6□□□□□ -0.23
MSLN-207ENST00000566549 SAP30O75446 220 aa13.6□□□□□ -0.23
MSLN-207ENST00000566549 A0A1W2PPM0 123 aa13.59□□□□□ -0.23
MSLN-207ENST00000566549 RNASE1P07998 156 aaKnown RBP13.59□□□□□ -0.23
MSLN-207ENST00000566549 SETXQ7Z333 2677 aaKnown RBP13.59□□□□□ -0.23
MSLN-207ENST00000566549 CEMP1Q6PRD7 247 aaPredicted RBP13.59□□□□□ -0.23
MSLN-207ENST00000566549 HECTD1Q9ULT8 2610 aa13.59□□□□□ -0.23
MSLN-207ENST00000566549 NOTCH3Q9UM47 2321 aa13.59□□□□□ -0.23
MSLN-207ENST00000566549 PAPPA-AS1Q5QFB9 102 aa13.58□□□□□ -0.24
MSLN-207ENST00000566549 SAMD5Q5TGI4 173 aa13.58□□□□□ -0.24
MSLN-207ENST00000566549 WFDC10AQ9H1F0 79 aa13.58□□□□□ -0.24
MSLN-207ENST00000566549 TRBV7-3A0A075B6L6 115 aa13.58□□□□□ -0.24
MSLN-207ENST00000566549 IGHV3-38A0A0C4DH36 116 aa13.58□□□□□ -0.24
MSLN-207ENST00000566549 GAGE12BA1L429 117 aa13.58□□□□□ -0.24
MSLN-207ENST00000566549 TSPEAR-AS2P59090 65 aa13.58□□□□□ -0.24
MSLN-207ENST00000566549 HERVK_113P61574 105 aa13.58□□□□□ -0.24
MSLN-207ENST00000566549 TRAV25A0A0B4J276 109 aa13.57□□□□□ -0.24
MSLN-207ENST00000566549 RNASE13Q5GAN3 156 aaKnown RBP13.57□□□□□ -0.24
MSLN-207ENST00000566549 GTF2H5Q6ZYL4 71 aa13.57□□□□□ -0.24
MSLN-207ENST00000566549 C1orf158Q8N1D5 194 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms