RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 ATP5LO75964 103 aa12.18□□□□□ -0.46
RAB40C-210ENST00000566290 MGPP08493 103 aa12.18□□□□□ -0.46
RAB40C-210ENST00000566290 POLR2KP53803 58 aaKnown RBP12.18□□□□□ -0.46
RAB40C-210ENST00000566290 EGFEM1PQ0D2K5 195 aa12.18□□□□□ -0.46
RAB40C-210ENST00000566290 SUMO4Q6EEV6 95 aa12.18□□□□□ -0.46
RAB40C-210ENST00000566290 LINC00173Q6ZV60 143 aa12.18□□□□□ -0.46
RAB40C-210ENST00000566290 AGRNO00468 2067 aa12.18□□□□□ -0.46
RAB40C-210ENST00000566290 DNAH1Q9P2D7 4330 aa12.18□□□□□ -0.46
RAB40C-210ENST00000566290 TRBV27A0A0K0K1C4 114 aa12.17□□□□□ -0.46
RAB40C-210ENST00000566290 FXYD7P58549 80 aa12.17□□□□□ -0.46
RAB40C-210ENST00000566290 UFSP1Q6NVU6 142 aa12.17□□□□□ -0.46
RAB40C-210ENST00000566290 C1orf158Q8N1D5 194 aa12.17□□□□□ -0.46
RAB40C-210ENST00000566290 IFI27L1Q96BM0 104 aa12.17□□□□□ -0.46
RAB40C-210ENST00000566290 M0QY20 66 aa12.16□□□□□ -0.46
RAB40C-210ENST00000566290 TMEM263Q8WUH6 116 aaKnown RBP12.16□□□□□ -0.46
RAB40C-210ENST00000566290 LINC01587Q99440 93 aa12.16□□□□□ -0.46
RAB40C-210ENST00000566290 ST20Q9HBF5 79 aa12.16□□□□□ -0.46
RAB40C-210ENST00000566290 DEFB121Q5J5C9 76 aa12.15□□□□□ -0.46
RAB40C-210ENST00000566290 ZFP2Q6ZN57 461 aa12.15□□□□□ -0.46
RAB40C-210ENST00000566290 RNASE8Q8TDE3 154 aaKnown RBP12.15□□□□□ -0.46
RAB40C-210ENST00000566290 GOLT1BQ9Y3E0 138 aa12.15□□□□□ -0.46
RAB40C-210ENST00000566290 VCYO14598 125 aa12.14□□□□□ -0.47
RAB40C-210ENST00000566290 GIG44P09565 113 aaPredicted RBP12.14□□□□□ -0.47
RAB40C-210ENST00000566290 RPL39LQ96EH5 51 aaKnown RBP12.14□□□□□ -0.47
RAB40C-210ENST00000566290 MIEN1Q9BRT3 115 aa12.14□□□□□ -0.47
RAB40C-210ENST00000566290 PRO1933Q9H354 126 aa12.14□□□□□ -0.47
RAB40C-210ENST00000566290 SPRY2O43597 315 aa12.13□□□□□ -0.47
RAB40C-210ENST00000566290 CIDEAO60543 219 aa12.13□□□□□ -0.47
RAB40C-210ENST00000566290 SPATA45Q537H7 98 aa12.13□□□□□ -0.47
RAB40C-210ENST00000566290 ZNF705AQ6ZN79 300 aaPredicted RBP12.13□□□□□ -0.47
RAB40C-210ENST00000566290 CSNK1G2-AS1Q8NCQ2 148 aa12.13□□□□□ -0.47
RAB40C-210ENST00000566290 TOMM6Q96B49 74 aa12.13□□□□□ -0.47
RAB40C-210ENST00000566290 JPT2Q9H910 190 aa12.13□□□□□ -0.47
RAB40C-210ENST00000566290 XCL2Q9UBD3 114 aa12.13□□□□□ -0.47
RAB40C-210ENST00000566290 PAM16Q9Y3D7 125 aa12.13□□□□□ -0.47
RAB40C-210ENST00000566290 A0A087WWL8 130 aa12.12□□□□□ -0.47
RAB40C-210ENST00000566290 RS1O15537 224 aa12.12□□□□□ -0.47
RAB40C-210ENST00000566290 DAZ2Q13117 558 aaKnown RBP12.12□□□□□ -0.47
RAB40C-210ENST00000566290 RHOHQ15669 191 aa12.12□□□□□ -0.47
RAB40C-210ENST00000566290 C16orf74Q96GX8 76 aa12.12□□□□□ -0.47
RAB40C-210ENST00000566290 ZNF56Q15929 161 aa12.11□□□□□ -0.47
RAB40C-210ENST00000566290 GTSCR1Q86UQ5 136 aa12.11□□□□□ -0.47
RAB40C-210ENST00000566290 KIR2DL4Q99706 377 aa12.11□□□□□ -0.47
RAB40C-210ENST00000566290 TMEM208Q9BTX3 173 aa12.11□□□□□ -0.47
RAB40C-210ENST00000566290 CSTL1Q9H114 145 aa12.11□□□□□ -0.47
RAB40C-210ENST00000566290 TRAV12-1A0A0B4J245 112 aa12.1□□□□□ -0.47
RAB40C-210ENST00000566290 SDHAF1A6NFY7 115 aa12.1□□□□□ -0.47
RAB40C-210ENST00000566290 IGLC3P0DOY3 106 aa12.1□□□□□ -0.47
RAB40C-210ENST00000566290 LBHQ53QV2 105 aaPredicted RBP12.1□□□□□ -0.47
RAB40C-210ENST00000566290 DNAJC30Q96LL9 226 aa12.1□□□□□ -0.47
RAB40C-210ENST00000566290 ZMAT4Q9H898 229 aa12.1□□□□□ -0.47
RAB40C-210ENST00000566290 UQCR10Q9UDW1 63 aa12.1□□□□□ -0.47
RAB40C-210ENST00000566290 HSBP1L1C9JCN9 74 aa12.09□□□□□ -0.47
RAB40C-210ENST00000566290 F5H697 171 aa12.09□□□□□ -0.47
RAB40C-210ENST00000566290 NUDT3O95989 172 aa12.09□□□□□ -0.47
RAB40C-210ENST00000566290 IGHV3-53P01767 116 aa12.09□□□□□ -0.47
RAB40C-210ENST00000566290 FAM74A4Q5TZK3 123 aa12.09□□□□□ -0.47
RAB40C-210ENST00000566290 CFAP126Q5VTH2 177 aa12.09□□□□□ -0.47
RAB40C-210ENST00000566290 SORL1Q92673 2214 aa12.09□□□□□ -0.47
RAB40C-210ENST00000566290 ERASQ7Z444 233 aa12.08□□□□□ -0.48
RAB40C-210ENST00000566290 KIR2DL5BQ8NHK3 375 aa12.08□□□□□ -0.48
RAB40C-210ENST00000566290 OVOL2Q9BRP0 275 aa12.08□□□□□ -0.48
RAB40C-210ENST00000566290 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.07□□□□□ -0.48
RAB40C-210ENST00000566290 NPSP0C0P6 89 aa12.07□□□□□ -0.48
RAB40C-210ENST00000566290 ODF1Q14990 250 aa12.07□□□□□ -0.48
RAB40C-210ENST00000566290 C2orf66Q6UXQ4 117 aa12.07□□□□□ -0.48
RAB40C-210ENST00000566290 C14orf144Q96I85 54 aa12.07□□□□□ -0.48
RAB40C-210ENST00000566290 TIMM17AQ99595 171 aa12.07□□□□□ -0.48
RAB40C-210ENST00000566290 B9D2Q9BPU9 175 aa12.07□□□□□ -0.48
RAB40C-210ENST00000566290 CYSLTR1Q9Y271 337 aa12.07□□□□□ -0.48
RAB40C-210ENST00000566290 C3orf84H3BNL1 204 aa12.06□□□□□ -0.48
RAB40C-210ENST00000566290 TRAV4A0A0B4J268 109 aa12.05□□□□□ -0.48
RAB40C-210ENST00000566290 TRBV10-1A0A0K0K1A3 114 aa12.05□□□□□ -0.48
RAB40C-210ENST00000566290 PLAC8L1A1L4L8 177 aa12.05□□□□□ -0.48
RAB40C-210ENST00000566290 SMIM9A6NGZ8 99 aa12.05□□□□□ -0.48
RAB40C-210ENST00000566290 I3L3M4 83 aa12.05□□□□□ -0.48
RAB40C-210ENST00000566290 AZU1P20160 251 aa12.05□□□□□ -0.48
RAB40C-210ENST00000566290 TMEM141Q96I45 108 aa12.05□□□□□ -0.48
RAB40C-210ENST00000566290 C18orf15Q96N68 181 aa12.05□□□□□ -0.48
RAB40C-210ENST00000566290 WFDC10AQ9H1F0 79 aa12.05□□□□□ -0.48
RAB40C-210ENST00000566290 HYDINQ4G0P3 5121 aa12.05□□□□□ -0.48
RAB40C-210ENST00000566290 STAB2Q8WWQ8 2551 aa12.04□□□□□ -0.48
RAB40C-210ENST00000566290 A0A087WX48 190 aa12.04□□□□□ -0.48
RAB40C-210ENST00000566290 HTN1P15515 57 aa12.04□□□□□ -0.48
RAB40C-210ENST00000566290 RRN3P1Q2M238 152 aa12.04□□□□□ -0.48
RAB40C-210ENST00000566290 ATOH7Q8N100 152 aa12.04□□□□□ -0.48
RAB40C-210ENST00000566290 PMCHL2Q9BQD1 86 aa12.04□□□□□ -0.48
RAB40C-210ENST00000566290 PLNP26678 52 aa12.03□□□□□ -0.48
RAB40C-210ENST00000566290 CTAG1AP78358 180 aa12.03□□□□□ -0.48
RAB40C-210ENST00000566290 SCGB3A1Q96QR1 104 aa12.03□□□□□ -0.48
RAB40C-210ENST00000566290 MRPL16Q9NX20 251 aaKnown RBP12.03□□□□□ -0.48
RAB40C-210ENST00000566290 MRPS16Q9Y3D3 137 aaKnown RBP12.03□□□□□ -0.48
RAB40C-210ENST00000566290 IGIPA6NJ69 53 aa12.02□□□□□ -0.49
RAB40C-210ENST00000566290 DPM2O94777 84 aa12.02□□□□□ -0.49
RAB40C-210ENST00000566290 TSHBP01222 138 aa12.02□□□□□ -0.49
RAB40C-210ENST00000566290 PRSS1P07477 247 aa12.02□□□□□ -0.49
RAB40C-210ENST00000566290 CRYBA4P53673 196 aa12.02□□□□□ -0.49
RAB40C-210ENST00000566290 Q6ZN92 141 aa12.02□□□□□ -0.49
RAB40C-210ENST00000566290 LINC00612Q8N6U2 182 aa12.02□□□□□ -0.49
RAB40C-210ENST00000566290 NEXN-AS1Q8NBZ9 246 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms