RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 TMEM219Q86XT9 240 aa12.22□□□□□ -0.45
LINC00554-201ENST00000564841 C20orf173Q96LM9 149 aa12.22□□□□□ -0.45
LINC00554-201ENST00000564841 DPH3P1Q9H4G8 78 aa12.22□□□□□ -0.45
LINC00554-201ENST00000564841 TRIAP1O43715 76 aa12.22□□□□□ -0.45
LINC00554-201ENST00000564841 ZFAND3Q9H8U3 227 aa12.22□□□□□ -0.45
LINC00554-201ENST00000564841 VPREB3Q9UKI3 123 aa12.22□□□□□ -0.45
LINC00554-201ENST00000564841 PMVKQ15126 192 aa12.21□□□□□ -0.45
LINC00554-201ENST00000564841 A0A087WWL8 130 aa12.21□□□□□ -0.45
LINC00554-201ENST00000564841 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
LINC00554-201ENST00000564841 FBN2P35556 2912 aa12.21□□□□□ -0.45
LINC00554-201ENST00000564841 SORL1Q92673 2214 aa12.21□□□□□ -0.46
LINC00554-201ENST00000564841 F6UB75 175 aa12.21□□□□□ -0.46
LINC00554-201ENST00000564841 BRD3OSQ6XYD6 125 aa12.21□□□□□ -0.46
LINC00554-201ENST00000564841 CLEC2BQ92478 149 aa12.21□□□□□ -0.46
LINC00554-201ENST00000564841 CCL19Q99731 98 aa12.21□□□□□ -0.46
LINC00554-201ENST00000564841 H3BMM0 161 aa12.2□□□□□ -0.46
LINC00554-201ENST00000564841 C2orf82Q6UX34 121 aa12.2□□□□□ -0.46
LINC00554-201ENST00000564841 UBE2WQ96B02 151 aa12.2□□□□□ -0.46
LINC00554-201ENST00000564841 ATP5J2P56134 94 aa12.2□□□□□ -0.46
LINC00554-201ENST00000564841 CEMP1Q6PRD7 247 aaPredicted RBP12.2□□□□□ -0.46
LINC00554-201ENST00000564841 IGHV7-81A0A0B4J1V7 117 aa12.19□□□□□ -0.46
LINC00554-201ENST00000564841 RBAKDNA6NC62 111 aa12.19□□□□□ -0.46
LINC00554-201ENST00000564841 M0QXV9 152 aa12.19□□□□□ -0.46
LINC00554-201ENST00000564841 LGALS9O00182 355 aa12.19□□□□□ -0.46
LINC00554-201ENST00000564841 ATXN8Q156A1 80 aa12.19□□□□□ -0.46
LINC00554-201ENST00000564841 OR10J6PQ8NGY7 276 aa12.19□□□□□ -0.46
LINC00554-201ENST00000564841 RNF5Q99942 180 aa12.19□□□□□ -0.46
LINC00554-201ENST00000564841 PRSS2P07478 247 aa12.19□□□□□ -0.46
LINC00554-201ENST00000564841 ZNF256Q9Y2P7 627 aaPredicted RBP12.19□□□□□ -0.46
LINC00554-201ENST00000564841 LOC107984640A0A0U1RRK4 108 aa12.19□□□□□ -0.46
LINC00554-201ENST00000564841 RNASE4P34096 147 aaKnown RBP12.19□□□□□ -0.46
LINC00554-201ENST00000564841 MAPK1IP1LQ8NDC0 245 aa12.19□□□□□ -0.46
LINC00554-201ENST00000564841 NPBQ8NG41 125 aa12.19□□□□□ -0.46
LINC00554-201ENST00000564841 C16orf92Q96LL3 132 aa12.19□□□□□ -0.46
LINC00554-201ENST00000564841 MYO9AB2RTY4 2548 aa12.18□□□□□ -0.46
LINC00554-201ENST00000564841 H7C423 109 aa12.18□□□□□ -0.46
LINC00554-201ENST00000564841 M0R1W7 72 aa12.18□□□□□ -0.46
LINC00554-201ENST00000564841 SAA4P35542 130 aa12.18□□□□□ -0.46
LINC00554-201ENST00000564841 LMO4P61968 165 aa12.18□□□□□ -0.46
LINC00554-201ENST00000564841 ATP6V0E1O15342 81 aa12.18□□□□□ -0.46
LINC00554-201ENST00000564841 LINC01587Q99440 93 aa12.18□□□□□ -0.46
LINC00554-201ENST00000564841 IGHV4-61A0A0C4DH41 118 aa12.17□□□□□ -0.46
LINC00554-201ENST00000564841 F5H697 171 aa12.17□□□□□ -0.46
LINC00554-201ENST00000564841 Q6Q795 121 aa12.17□□□□□ -0.46
LINC00554-201ENST00000564841 TRBV10-2A0A0K0K1G8 114 aa12.17□□□□□ -0.46
LINC00554-201ENST00000564841 UBE2E1P51965 193 aa12.17□□□□□ -0.46
LINC00554-201ENST00000564841 C9orf47Q6ZRZ4 202 aa12.17□□□□□ -0.46
LINC00554-201ENST00000564841 MDFICQ9P1T7 246 aa12.17□□□□□ -0.46
LINC00554-201ENST00000564841 KLK5Q9Y337 293 aaPredicted RBP12.17□□□□□ -0.46
LINC00554-201ENST00000564841 ZFAND2AQ8N6M9 145 aa12.16□□□□□ -0.46
LINC00554-201ENST00000564841 LINC00694P0DN24 101 aa12.16□□□□□ -0.46
LINC00554-201ENST00000564841 RNASE3P12724 160 aaKnown RBP12.16□□□□□ -0.46
LINC00554-201ENST00000564841 CCDC140Q96MF4 163 aa12.16□□□□□ -0.46
LINC00554-201ENST00000564841 TEX15Q9BXT5 2789 aa12.15□□□□□ -0.46
LINC00554-201ENST00000564841 OOSP1A8MZH6 123 aa12.15□□□□□ -0.46
LINC00554-201ENST00000564841 P0DMU3 169 aa12.15□□□□□ -0.46
LINC00554-201ENST00000564841 FAM231AP0DMU4 169 aa12.15□□□□□ -0.46
LINC00554-201ENST00000564841 FAM231CP0DMU5 169 aa12.15□□□□□ -0.46
LINC00554-201ENST00000564841 ZNF876PQ49A33 203 aa12.15□□□□□ -0.46
LINC00554-201ENST00000564841 FAM74A4Q5TZK3 123 aa12.15□□□□□ -0.46
LINC00554-201ENST00000564841 ODF3BA8MYP8 253 aa12.15□□□□□ -0.46
LINC00554-201ENST00000564841 SIRPDQ9H106 197 aa12.15□□□□□ -0.46
LINC00554-201ENST00000564841 YAE1D1Q9NRH1 226 aa12.15□□□□□ -0.46
LINC00554-201ENST00000564841 TRGV11A0A075B6L2 103 aa12.14□□□□□ -0.47
LINC00554-201ENST00000564841 A8MZ25 164 aa12.14□□□□□ -0.47
LINC00554-201ENST00000564841 RPL13AP40429 203 aaKnown RBP12.14□□□□□ -0.47
LINC00554-201ENST00000564841 MRPL23Q16540 153 aaKnown RBP12.14□□□□□ -0.47
LINC00554-201ENST00000564841 Q8N9W7 124 aa12.14□□□□□ -0.47
LINC00554-201ENST00000564841 EEF1AKMT3Q96AZ1 226 aa12.14□□□□□ -0.47
LINC00554-201ENST00000564841 IGHV4-30-2A0A087WSY4 118 aa12.14□□□□□ -0.47
LINC00554-201ENST00000564841 A0A0J9YXV3 536 aa12.14□□□□□ -0.47
LINC00554-201ENST00000564841 FAM236AA0A1B0GUQ0 79 aa12.14□□□□□ -0.47
LINC00554-201ENST00000564841 FAM236BA0A1B0GV22 79 aa12.14□□□□□ -0.47
LINC00554-201ENST00000564841 LINC00315P59091 139 aa12.14□□□□□ -0.47
LINC00554-201ENST00000564841 SDHAF1A6NFY7 115 aa12.13□□□□□ -0.47
LINC00554-201ENST00000564841 SUMO4Q6EEV6 95 aa12.13□□□□□ -0.47
LINC00554-201ENST00000564841 PRRC2AP48634 2157 aaKnown RBP12.13□□□□□ -0.47
LINC00554-201ENST00000564841 LY6EQ16553 131 aa12.13□□□□□ -0.47
LINC00554-201ENST00000564841 ADAMTSL4-AS1Q5T5F5 129 aa12.13□□□□□ -0.47
LINC00554-201ENST00000564841 SPXQ9BT56 116 aa12.13□□□□□ -0.47
LINC00554-201ENST00000564841 ACANP16112 2415 aa12.13□□□□□ -0.47
LINC00554-201ENST00000564841 A0A0B4J2C4 111 aa12.13□□□□□ -0.47
LINC00554-201ENST00000564841 RPL11P62913 178 aaKnown RBP12.13□□□□□ -0.47
LINC00554-201ENST00000564841 HELZ2Q9BYK8 2649 aaKnown RBP12.12□□□□□ -0.47
LINC00554-201ENST00000564841 TRAV8-3A0A0A6YYJ7 113 aa12.12□□□□□ -0.47
LINC00554-201ENST00000564841 IGHV3-11P01762 117 aa12.12□□□□□ -0.47
LINC00554-201ENST00000564841 POLR2KP53803 58 aaKnown RBP12.12□□□□□ -0.47
LINC00554-201ENST00000564841 PAPPA-AS1Q5QFB9 102 aa12.12□□□□□ -0.47
LINC00554-201ENST00000564841 TMEM223A0PJW6 202 aa12.11□□□□□ -0.47
LINC00554-201ENST00000564841 RNASE13Q5GAN3 156 aaKnown RBP12.11□□□□□ -0.47
LINC00554-201ENST00000564841 A0A0J9YXY3 114 aa12.11□□□□□ -0.47
LINC00554-201ENST00000564841 TRBV12-3P01733 135 aa12.11□□□□□ -0.47
LINC00554-201ENST00000564841 METTL26Q96S19 204 aa12.11□□□□□ -0.47
LINC00554-201ENST00000564841 PIMREGQ9BSJ6 248 aa12.11□□□□□ -0.47
LINC00554-201ENST00000564841 UBR5O95071 2799 aaPredicted RBP12.1□□□□□ -0.47
LINC00554-201ENST00000564841 TRAV21A0A0B4J279 112 aa12.1□□□□□ -0.47
LINC00554-201ENST00000564841 DAND5Q8N907 189 aa12.1□□□□□ -0.47
LINC00554-201ENST00000564841 ICOSQ9Y6W8 199 aa12.1□□□□□ -0.47
LINC00554-201ENST00000564841 KIF25-AS1Q9Y6Z4 181 aa12.1□□□□□ -0.47
LINC00554-201ENST00000564841 MXRA5Q9NR99 2828 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms