RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 C11orf21Q9P2W6 132 aa8.37□□□□□ -1.07
TCF4-222ENST00000564228 F8W735 103 aaPredicted RBP8.36□□□□□ -1.07
TCF4-222ENST00000564228 ANXA2RQ3ZCQ2 193 aa8.36□□□□□ -1.07
TCF4-222ENST00000564228 LINC01620Q4KN68 170 aa8.36□□□□□ -1.07
TCF4-222ENST00000564228 SPANXN1Q5VSR9 72 aa8.36□□□□□ -1.07
TCF4-222ENST00000564228 MRPL53Q96EL3 112 aaKnown RBP8.36□□□□□ -1.07
TCF4-222ENST00000564228 YAE1D1Q9NRH1 226 aa8.36□□□□□ -1.07
TCF4-222ENST00000564228 TRBV10-2A0A0K0K1G8 114 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 C11orf86A6NJI1 115 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 PPP1R17O96001 155 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 TNP2Q05952 138 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 TMEM263Q8WUH6 116 aaKnown RBP8.35□□□□□ -1.07
TCF4-222ENST00000564228 VPREB3Q9UKI3 123 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 IGLV4-69A0A075B6H9 119 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 H3BMM0 161 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 LGALS9O00182 355 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 NBR2O15453 112 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 KLHL30-AS1Q8NEE0 82 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 UBE2WQ96B02 151 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 KLK15Q9H2R5 256 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 C21orf62Q9NYP8 219 aa8.35□□□□□ -1.07
TCF4-222ENST00000564228 MXRA5Q9NR99 2828 aa8.34□□□□□ -1.07
TCF4-222ENST00000564228 TRAV2A0A0B4J234 112 aa8.34□□□□□ -1.07
TCF4-222ENST00000564228 TRBV7-7A0A0K0K1E9 115 aa8.34□□□□□ -1.07
TCF4-222ENST00000564228 CRIP2P52943 208 aaPredicted RBP8.34□□□□□ -1.07
TCF4-222ENST00000564228 Q6ZQT7 251 aa8.34□□□□□ -1.07
TCF4-222ENST00000564228 FANCD2OSQ96PS1 177 aa8.34□□□□□ -1.07
TCF4-222ENST00000564228 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.33□□□□□ -1.08
TCF4-222ENST00000564228 PRAC2D3DTV9 90 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 CRYGDP07320 174 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 EBI3Q14213 229 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 PMVKQ15126 192 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 OTOGQ6ZRI0 2925 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 Q6ZS46 218 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 TRPT1Q86TN4 253 aaKnown RBP8.33□□□□□ -1.08
TCF4-222ENST00000564228 AMELXQ99217 191 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 H3BUX3 64 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 LY6EQ16553 131 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 IGFL4Q6B9Z1 124 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 TMEM219Q86XT9 240 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 Q8N6K4 173 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 NPBQ8NG41 125 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 TMEM141Q96I45 108 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 LINC01587Q99440 93 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 DPH3P1Q9H4G8 78 aa8.33□□□□□ -1.08
TCF4-222ENST00000564228 TRBV30A0A0K0K1B3 111 aa8.32□□□□□ -1.08
TCF4-222ENST00000564228 A4D1N5 150 aa8.32□□□□□ -1.08
TCF4-222ENST00000564228 H3BT86 120 aa8.32□□□□□ -1.08
TCF4-222ENST00000564228 FSHBP01225 129 aa8.32□□□□□ -1.08
TCF4-222ENST00000564228 KRTAP1-1Q07627 177 aa8.32□□□□□ -1.08
TCF4-222ENST00000564228 DEFB112Q30KQ8 113 aa8.32□□□□□ -1.08
TCF4-222ENST00000564228 DEFB121Q5J5C9 76 aa8.32□□□□□ -1.08
TCF4-222ENST00000564228 C9orf47Q6ZRZ4 202 aa8.32□□□□□ -1.08
TCF4-222ENST00000564228 AGPAT4-IT1Q9H0P7 198 aa8.32□□□□□ -1.08
TCF4-222ENST00000564228 DUSP14O95147 198 aaKnown RBP8.31□□□□□ -1.08
TCF4-222ENST00000564228 MED14OSP0DP75 135 aa8.31□□□□□ -1.08
TCF4-222ENST00000564228 TSPEAR-AS2P59090 65 aa8.31□□□□□ -1.08
TCF4-222ENST00000564228 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.31□□□□□ -1.08
TCF4-222ENST00000564228 IMUPQ9GZP8 106 aa8.31□□□□□ -1.08
TCF4-222ENST00000564228 J3QQQ9 107 aa8.31□□□□□ -1.08
TCF4-222ENST00000564228 POM121L12Q8N7R1 296 aa8.31□□□□□ -1.08
TCF4-222ENST00000564228 Q8N9W7 124 aa8.31□□□□□ -1.08
TCF4-222ENST00000564228 DNAJC30Q96LL9 226 aa8.31□□□□□ -1.08
TCF4-222ENST00000564228 TIMM17AQ99595 171 aa8.31□□□□□ -1.08
TCF4-222ENST00000564228 SMR3AQ99954 134 aa8.31□□□□□ -1.08
TCF4-222ENST00000564228 LENEPQ9Y5L5 61 aa8.31□□□□□ -1.08
TCF4-222ENST00000564228 SETXQ7Z333 2677 aaKnown RBP8.3□□□□□ -1.08
TCF4-222ENST00000564228 MTORP42345 2549 aa8.3□□□□□ -1.08
TCF4-222ENST00000564228 A0A0J9YX75 114 aa8.3□□□□□ -1.08
TCF4-222ENST00000564228 TEX49A0A1B0GTD5 131 aa8.3□□□□□ -1.08
TCF4-222ENST00000564228 IGIPA6NJ69 53 aa8.3□□□□□ -1.08
TCF4-222ENST00000564228 M0R2P5 195 aa8.3□□□□□ -1.08
TCF4-222ENST00000564228 EIF4EBP3O60516 100 aaPredicted RBP8.3□□□□□ -1.08
TCF4-222ENST00000564228 CTSGP08311 255 aa8.3□□□□□ -1.08
TCF4-222ENST00000564228 LGALS3P17931 250 aaKnown RBP8.3□□□□□ -1.08
TCF4-222ENST00000564228 S4R3C0 116 aa8.3□□□□□ -1.08
TCF4-222ENST00000564228 LEPROTO15243 131 aa8.29□□□□□ -1.08
TCF4-222ENST00000564228 TSHBP01222 138 aa8.29□□□□□ -1.08
TCF4-222ENST00000564228 RPL39LQ96EH5 51 aaKnown RBP8.29□□□□□ -1.08
TCF4-222ENST00000564228 SPANXCQ9NY87 97 aa8.29□□□□□ -1.08
TCF4-222ENST00000564228 HIVEP2P31629 2446 aa8.29□□□□□ -1.08
TCF4-222ENST00000564228 IGHV4-59P01825 116 aa8.29□□□□□ -1.08
TCF4-222ENST00000564228 ZNF876PQ49A33 203 aa8.29□□□□□ -1.08
TCF4-222ENST00000564228 TMEM170BQ5T4T1 132 aa8.29□□□□□ -1.08
TCF4-222ENST00000564228 C9orf139Q6ZV77 190 aa8.29□□□□□ -1.08
TCF4-222ENST00000564228 TMEM101Q96IK0 257 aa8.29□□□□□ -1.08
TCF4-222ENST00000564228 MOB4Q9Y3A3 225 aa8.29□□□□□ -1.08
TCF4-222ENST00000564228 SDHAF1A6NFY7 115 aa8.28□□□□□ -1.08
TCF4-222ENST00000564228 BUB3O43684 328 aa8.28□□□□□ -1.08
TCF4-222ENST00000564228 RNF182Q8N6D2 247 aa8.28□□□□□ -1.08
TCF4-222ENST00000564228 C5orf56Q8N8D9 126 aa8.28□□□□□ -1.08
TCF4-222ENST00000564228 A6NDX4 124 aa8.27□□□□□ -1.09
TCF4-222ENST00000564228 NDPQ00604 133 aa8.27□□□□□ -1.09
TCF4-222ENST00000564228 C2orf82Q6UX34 121 aa8.27□□□□□ -1.09
TCF4-222ENST00000564228 PPDPFQ9H3Y8 114 aa8.27□□□□□ -1.09
TCF4-222ENST00000564228 TP53TG1Q9Y2A0 90 aa8.27□□□□□ -1.09
TCF4-222ENST00000564228 IGHV4OR15-8A0A075B7B6 117 aa8.27□□□□□ -1.09
TCF4-222ENST00000564228 A0A087WW49 117 aa8.27□□□□□ -1.09
TCF4-222ENST00000564228 IGHV7-81A0A0B4J1V7 117 aa8.27□□□□□ -1.09
TCF4-222ENST00000564228 ATP5G1P05496 136 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms