RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 TCTAP57738 103 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 KRTAP10-12P60413 245 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 PKIAP61925 76 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 HBBP68871 147 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 OR5I1Q13606 314 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 KLF5Q13887 457 aaPredicted RBP2.29□□□□□ -2.04
SPG11-225ENST00000561391 ECSCRQ19T08 205 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 FAM106AQ4KMX7 169 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 LCN12Q6JVE5 192 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 TOMM20LQ6UXN7 152 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 TMEM136Q6ZRR5 245 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 GOLT1AQ6ZVE7 132 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 SMIM15Q7Z3B0 74 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 Q86TA4 180 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 NUP35Q8NFH5 326 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 OR2D3Q8NGH3 330 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 C4orf3Q8WVX3 66 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 CHCHD1Q96BP2 118 aaKnown RBP2.29□□□□□ -2.04
SPG11-225ENST00000561391 LINC00477Q96M19 166 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 VGLL1Q99990 258 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 FAM103A1Q9BTL3 118 aaKnown RBP2.29□□□□□ -2.04
SPG11-225ENST00000561391 SAMD10Q9BYL1 202 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 GNB4Q9HAV0 340 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 UFC1Q9Y3C8 167 aa2.29□□□□□ -2.04
SPG11-225ENST00000561391 LRP2P98164 4655 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 FSIP2Q5CZC0 6907 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 A0A1B0GXF2 115 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 C20orf202A1L168 122 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 PCP4L1A6NKN8 68 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 LGALS9O00182 355 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 HSBP1O75506 76 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 IGLV1-51P01701 117 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 IGHG4P01861 327 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 GPX1P07203 203 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 ZNF138P52744 262 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 HIST1H1AQ02539 215 aaPredicted RBP2.28□□□□□ -2.04
SPG11-225ENST00000561391 SRSF9Q13242 221 aaKnown RBP eCLIP2.28□□□□□ -2.04
SPG11-225ENST00000561391 PMCHL1Q16048 86 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 TMEM78Q5T7P6 136 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 LELP1Q5T871 98 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 LEMD1Q68G75 181 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 MRPL54Q6P161 138 aaKnown RBP2.28□□□□□ -2.04
SPG11-225ENST00000561391 CLEC19AQ6UXS0 136 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 Q6ZR54 194 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 MRPL52Q86TS9 123 aaKnown RBP2.28□□□□□ -2.04
SPG11-225ENST00000561391 GPHB5Q86YW7 130 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 EXOC3-AS1Q8N2X6 119 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 GATD1Q8NB37 220 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 OR10J6PQ8NGY7 276 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 C11orf45Q8TAV5 145 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 HSPB9Q9BQS6 159 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 WFDC10AQ9H1F0 79 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 DAZ1Q9NQZ3 744 aaKnown RBP2.28□□□□□ -2.04
SPG11-225ENST00000561391 PEF1Q9UBV8 284 aaKnown RBP2.28□□□□□ -2.04
SPG11-225ENST00000561391 RPH3ALQ9UNE2 315 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 LAMTOR2Q9Y2Q5 125 aa2.28□□□□□ -2.04
SPG11-225ENST00000561391 LOC102724200A0A096LPH7 203 aaPredicted RBP2.27□□□□□ -2.05
SPG11-225ENST00000561391 OR11H12B2RN74 326 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 G3V318 75 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 SPINK4O60575 86 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 ZNF324O75467 553 aaPredicted RBP2.27□□□□□ -2.05
SPG11-225ENST00000561391 SERF1AO75920 110 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 PPP1R17O96001 155 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 CD7P09564 240 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 LINC00614P0C842 121 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 GZMBP10144 247 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 G0S2P27469 103 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 SRIP30626 198 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 FUSP35637 526 aaKnown RBP eCLIP2.27□□□□□ -2.05
SPG11-225ENST00000561391 TCL1AP56279 114 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 CACNG7P62955 275 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 GNG5P63218 68 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 NDPQ00604 133 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 PDZD11Q5EBL8 140 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 PYY3Q5JQD4 70 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 ZNF493Q6ZR52 646 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 TCF24Q7RTU0 167 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 KRTAP7-1Q8IUC3 87 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 GTSF1Q8WW33 167 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 KCNS1Q96KK3 526 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 PGLYRP4Q96LB8 373 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 NAGKQ9UJ70 344 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 HSPB8Q9UJY1 196 aa2.27□□□□□ -2.05
SPG11-225ENST00000561391 TRAV8-1A0A0A6YYK1 113 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 TRAV21A0A0B4J279 112 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 IGHV7-4-1A0A0J9YVY3 117 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 LINC01549A6NIU2 74 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 ZNF705FA8MVS1 300 aaPredicted RBP2.26□□□□□ -2.05
SPG11-225ENST00000561391 LINC01619G3V211 115 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 H3BTX0 84 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 K7EMI3 77 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 M0R2Z0 102 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 M0R3E3 92 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 SH2D1AO60880 128 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 CA1P00915 261 aaPredicted RBP2.26□□□□□ -2.05
SPG11-225ENST00000561391 IGHV3-23P01764 117 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 ORM1P02763 201 aa2.26□□□□□ -2.05
SPG11-225ENST00000561391 ZNF705DP0CH99 300 aaPredicted RBP2.26□□□□□ -2.05
SPG11-225ENST00000561391 ZNF705BP0CI00 300 aaPredicted RBP2.26□□□□□ -2.05
SPG11-225ENST00000561391 P0DMU3 169 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms