RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 MED9Q9NWA0 146 aa4.14□□□□□ -1.75
LRRC28-220ENST00000561253 TIMM8BQ9Y5J9 83 aaPredicted RBP4.14□□□□□ -1.75
LRRC28-220ENST00000561253 RPL37AP8A6NKH3 93 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 CXCL1P09341 107 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 SPART-AS1P0CW21 52 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 EMP1P54849 157 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 UBE2G1P62253 170 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 CASC10Q5T4H9 136 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 FAM162BQ5T6X4 162 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 Q6ZTI0 123 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 PTH2Q96A98 100 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 SPXQ9BT56 116 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 SMDT1Q9H4I9 107 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 LY96Q9Y6Y9 160 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 HECTD4Q9Y4D8 3996 aa4.13□□□□□ -1.75
LRRC28-220ENST00000561253 NACAE9PAV3 2078 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 LINC00862A6NCI5 91 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 C3orf84H3BNL1 204 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 HTN1P15515 57 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 GNG4P50150 75 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 RPL19P84098 196 aaKnown RBP4.12□□□□□ -1.75
LRRC28-220ENST00000561253 OR5I1Q13606 314 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 LGALS9BQ3B8N2 356 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 UFSP1Q6NVU6 142 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 CEMP1Q6PRD7 247 aaPredicted RBP4.12□□□□□ -1.75
LRRC28-220ENST00000561253 FAM159AQ6UWV7 190 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 LINC01551Q86U37 167 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 KCNS1Q96KK3 526 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 EIF5A2Q9GZV4 153 aaKnown RBP4.12□□□□□ -1.75
LRRC28-220ENST00000561253 Q9HAA7 133 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 IL36BQ9NZH7 164 aa4.12□□□□□ -1.75
LRRC28-220ENST00000561253 B4DEV8 164 aa4.11□□□□□ -1.75
LRRC28-220ENST00000561253 M0R036 132 aa4.11□□□□□ -1.75
LRRC28-220ENST00000561253 M0R2P5 195 aa4.11□□□□□ -1.75
LRRC28-220ENST00000561253 SNAI2O43623 268 aa4.11□□□□□ -1.75
LRRC28-220ENST00000561253 IGLC6P0CF74 106 aa4.11□□□□□ -1.75
LRRC28-220ENST00000561253 GATA1P15976 413 aaPredicted RBP4.11□□□□□ -1.75
LRRC28-220ENST00000561253 ADCYAP1P18509 176 aa4.11□□□□□ -1.75
LRRC28-220ENST00000561253 FAM231DQ6ZW35 169 aa4.11□□□□□ -1.75
LRRC28-220ENST00000561253 SMIM7Q9BQ49 75 aa4.11□□□□□ -1.75
LRRC28-220ENST00000561253 CNFNQ9BYD5 112 aa4.11□□□□□ -1.75
LRRC28-220ENST00000561253 MRPL16Q9NX20 251 aaKnown RBP4.11□□□□□ -1.75
LRRC28-220ENST00000561253 NAGKQ9UJ70 344 aa4.11□□□□□ -1.75
LRRC28-220ENST00000561253 PKHD1P08F94 4074 aa4.11□□□□□ -1.75
LRRC28-220ENST00000561253 TRGV1A0A0A0MS02 117 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 TRAV10A0A0B4J240 114 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 GRIFINA4D1Z8 144 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 ORM1P02763 201 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 OR5AL1P0C617 328 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 ARMS2P0C7Q2 107 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 DEFB130BP0DP73 79 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 DEFB130AP0DP74 79 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 LINC00315P59091 139 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 DAD1P61803 113 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 RPL23P62829 140 aaKnown RBP4.1□□□□□ -1.75
LRRC28-220ENST00000561253 PEA15Q15121 130 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 FAM74A3Q4VXF1 159 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 ZFAND6Q6FIF0 208 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 GTSF1Q8WW33 167 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 NDUFAF3Q9BU61 184 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 RNASE7Q9H1E1 156 aaKnown RBP4.1□□□□□ -1.75
LRRC28-220ENST00000561253 APLNQ9ULZ1 77 aa4.1□□□□□ -1.75
LRRC28-220ENST00000561253 DNAH5Q8TE73 4624 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 TMSB15BA0A087X1C1 80 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 DEFB131BA0A096LNP1 70 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 A0A0U1RRA0 63 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 NUPR2A6NF83 97 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 ZNF727A8MUV8 499 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 H3BVH4 76 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 RS1O15537 224 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 GZMBP10144 247 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 MGST1P10620 155 aaKnown RBP4.09□□□□□ -1.75
LRRC28-220ENST00000561253 CTRLP40313 264 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 ASIPP42127 132 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 FOXA3P55318 350 aaPredicted RBP4.09□□□□□ -1.75
LRRC28-220ENST00000561253 RAB14P61106 215 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 HIGD2BQ4VC39 106 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 SOHLH1Q5JUK2 328 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 C10orf91Q5T1B1 145 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 CFAP126Q5VTH2 177 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 UQCC3Q6UW78 93 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 OR10AG1Q8NH19 301 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 ISOC2Q96AB3 205 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 VSIG2Q96IQ7 327 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 FAM210BQ96KR6 192 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 NAT8Q9UHE5 227 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 V9GYV3 84 aa4.09□□□□□ -1.75
LRRC28-220ENST00000561253 TRAV4A0A0B4J268 109 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 TMEM218A2RU14 115 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 H3BNG1 76 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 P01737 135 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 ATP5G1P05496 136 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 CRYGDP07320 174 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 SFTA3P0C7M3 94 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 LINC00694P0DN24 101 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 CEBPGP53567 150 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 PKD1P98161 4303 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 DYNC1H1Q14204 4646 aaKnown RBP4.08□□□□□ -1.76
LRRC28-220ENST00000561253 TMEM241Q24JQ0 296 aa4.08□□□□□ -1.76
LRRC28-220ENST00000561253 REG3GQ6UW15 175 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms