RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 KRTAP1-5Q9BYS1 174 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 CYP4F30PQ9H0H9 118 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 PRO1933Q9H354 126 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 DPH3P1Q9H4G8 78 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 UQCR10Q9UDW1 63 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 SLX4Q8IY92 1834 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 RGPD8O14715 1765 aaPredicted RBP1.16□□□□□ -2.22
RTF1-207ENST00000561076 MGAMO43451 1857 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 TP53BP1Q12888 1972 aaPredicted RBP1.16□□□□□ -2.22
RTF1-207ENST00000561076 NACAE9PAV3 2078 aa1.16□□□□□ -2.22
RTF1-207ENST00000561076 LY75O60449 1722 aa1.15□□□□□ -2.22
RTF1-207ENST00000561076 TNRC18O15417 2968 aaPredicted RBP1.15□□□□□ -2.22
RTF1-207ENST00000561076 ARFGEF1Q9Y6D6 1849 aa1.15□□□□□ -2.22
RTF1-207ENST00000561076 HEATR5AQ86XA9 2040 aa1.15□□□□□ -2.22
RTF1-207ENST00000561076 TRAV12-3A0A0B4J271 114 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 TRBV6-4A0A1B0GX49 114 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 RBAKDNA6NC62 111 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 JMJD7-PLA2G4BH0Y9G9 81 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 NDUFC1O43677 76 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 CYB5AP00167 134 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 CCKP06307 115 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 RNASE2P10153 161 aaKnown RBP1.15□□□□□ -2.23
RTF1-207ENST00000561076 SMIM11AP58511 58 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 SEC11AP67812 179 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 C10orf128Q5T292 105 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 FAM74A4Q5TZK3 123 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 COA5Q86WW8 74 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 C9orf163Q8N9P6 203 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 LCN9Q8WX39 176 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 REG4Q9BYZ8 158 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 TTTY12Q9BZ98 90 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 WFDC10AQ9H1F0 79 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 MANBALQ9NQG1 85 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 C5P01031 1676 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 SETXQ7Z333 2677 aaKnown RBP1.15□□□□□ -2.23
RTF1-207ENST00000561076 SCN3AQ9NY46 2000 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 NCKAP5O14513 1909 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 CRYBG1Q9Y4K1 1723 aa1.15□□□□□ -2.23
RTF1-207ENST00000561076 EDC4Q6P2E9 1401 aaKnown RBP1.15□□□□□ -2.23
RTF1-207ENST00000561076 TRIOBPQ9H2D6 2365 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 SEC16AO15027 2179 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 ZFC3H1O60293 1989 aaKnown RBP1.14□□□□□ -2.23
RTF1-207ENST00000561076 TANC2Q9HCD6 1990 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 COL27A1Q8IZC6 1860 aaPredicted RBP1.14□□□□□ -2.23
RTF1-207ENST00000561076 PPLO60437 1756 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 USP54Q70EL1 1684 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 ADGRB1O14514 1584 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 DIDO1Q9BTC0 2240 aaKnown RBP1.14□□□□□ -2.23
RTF1-207ENST00000561076 TRGV2A0A075B6R0 118 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 UQCRHLA0A096LP55 91 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 TRBV6-5A0A0K0K1A5 114 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 HCG22E2RYF7 251 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 NUPR1O60356 82 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 MT-ATP8P03928 68 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 TFF1P04155 84 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 IGKV4-1P06312 121 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 UQCRHP07919 91 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 IGLC1P0CG04 106 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 TRAPPC2P0DI81 140 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 TRAPPC2BP0DI82 140 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 CNBPP62633 177 aaKnown RBP1.14□□□□□ -2.23
RTF1-207ENST00000561076 CCL8P80075 99 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 PYY3Q5JQD4 70 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 C10orf55Q5SWW7 151 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 ZNF818PQ6ZRF7 136 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 LINC00304Q8N9R0 145 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 FAM213BQ8TBF2 198 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 PATE1Q8WXA2 126 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 IFI27L1Q96BM0 104 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 C22orf24Q9Y442 160 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 CITO14578 2027 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 TRPM6Q9BX84 2022 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 FOCADQ5VW36 1801 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 TIAM2Q8IVF5 1701 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 DOT1LQ8TEK3 1739 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 MALRD1Q5VYJ5 2156 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 NFAT5O94916 1531 aa1.14□□□□□ -2.23
RTF1-207ENST00000561076 KIAA2026Q5HYC2 2103 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 USP9XQ93008 2570 aaPredicted RBP1.13□□□□□ -2.23
RTF1-207ENST00000561076 MYH13Q9UKX3 1938 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 MRC1P22897 1456 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 WNK3Q9BYP7 1800 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 TEX49A0A1B0GTD5 131 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 NUPR2A6NF83 97 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 HIGD1CA8MV81 97 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 SFT2D2O95562 160 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 COX6CP09669 75 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 IL9P15248 144 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 SSBP1Q04837 148 aaKnown RBP1.13□□□□□ -2.23
RTF1-207ENST00000561076 Q0VG73 95 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 KRTAP13-2Q52LG2 175 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 SPATA45Q537H7 98 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 LCE1AQ5T7P2 110 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 CSAG1Q6PB30 78 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 S100A16Q96FQ6 103 aaKnown RBP1.13□□□□□ -2.23
RTF1-207ENST00000561076 KRTAP4-8Q9BYQ9 185 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 RABAC1Q9UI14 185 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 UBR3Q6ZT12 1888 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 MYH6P13533 1939 aa1.13□□□□□ -2.23
RTF1-207ENST00000561076 HELZP42694 1942 aaKnown RBP1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms